FC920366
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: DCEA_ECOLI (Glutamate decarboxylase alpha OS=Escherichia coli (strain K12) GN=gadA PE=1 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.067e-63 Identity = 117/239 (48.95%), Postives = 155/239 (64.85%), Query Frame = 1 Query: 1 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQGAFEF 717 EA ML G+A K +W+++ + GKP DKPN+V G VQ+CW KFARY+ G M+P + +E DENTI V G T TG +E + LHD L K +TG D +H+DAASGGF+APF+ PD+ WDFRLP VKSI+ SGHK+GL G GWV+WR ++ LP ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +EF Sbjct: 128 EACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEF 365
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: DCEA_ECOL6 (Glutamate decarboxylase alpha OS=Escherichia coli O6 GN=gadA PE=1 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.067e-63 Identity = 117/239 (48.95%), Postives = 155/239 (64.85%), Query Frame = 1 Query: 1 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQGAFEF 717 EA ML G+A K +W+++ + GKP DKPN+V G VQ+CW KFARY+ G M+P + +E DENTI V G T TG +E + LHD L K +TG D +H+DAASGGF+APF+ PD+ WDFRLP VKSI+ SGHK+GL G GWV+WR ++ LP ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +EF Sbjct: 128 EACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEF 365
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: DCEA_ECO57 (Glutamate decarboxylase alpha OS=Escherichia coli O157:H7 GN=gadA PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.067e-63 Identity = 117/239 (48.95%), Postives = 155/239 (64.85%), Query Frame = 1 Query: 1 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQGAFEF 717 EA ML G+A K +W+++ + GKP DKPN+V G VQ+CW KFARY+ G M+P + +E DENTI V G T TG +E + LHD L K +TG D +H+DAASGGF+APF+ PD+ WDFRLP VKSI+ SGHK+GL G GWV+WR ++ LP ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +EF Sbjct: 128 EACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEF 365
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: DCEB_ECOL6 (Glutamate decarboxylase beta OS=Escherichia coli O6 GN=gadB PE=2 SV=2) HSP 1 Score: 240.35 bits (612), Expect = 7.854e-63 Identity = 116/239 (48.54%), Postives = 155/239 (64.85%), Query Frame = 1 Query: 1 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQGAFEF 717 EA ML G+A K +W+++ + GKP +KPN+V G VQ+CW KFARY+ G M+P + +E DENTI V G T TG +E + LHD L K +TG D +H+DAASGGF+APF+ PD+ WDFRLP VKSI+ SGHK+GL G GWV+WR ++ LP ELVF+++YLG TF +NFS+ + Q+IAQYY+F+RLG EGY + A L + + K G +EF Sbjct: 128 EACMLGGMAMKWRWRKRMEAAGKPTNKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEF 365
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 2.527e-61 Identity = 117/240 (48.75%), Postives = 155/240 (64.58%), Query Frame = 1 Query: 1 EAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQGAFE 714 EA ML G+A K W+++ ++ G + KPN+V + QVCWEKF Y+ + +N K ++ VDE TI V I+G T TG ++D+K L +L+ + N++T + IHVDAASGG APF+ P+LEWDFRL V SIN SGHKYGLVY GVGWV+WR K LP+EL+F ++YLG + PT +NFS +SQ+I QYY F+R GF+GYK I E A L E +EK G FE Sbjct: 126 EACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCVYWDIEMREVPMDREHMSINLEKVMDYVDEYTIGVVGIMGITYTGRYDDIKALDNLIEEYNKQTDYKVYIHVDAASGGLYAPFVEPELEWDFRLKNVISINTSGHKYGLVYPGVGWVLWRDKKYLPEELIFKVSYLGGELPTMAINFSHSASQLIGQYYNFVRYGFDGYKAIHERTHKVAMYLAEEIEKTGMFE 365
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.601e-61 Identity = 116/240 (48.33%), Postives = 155/240 (64.58%), Query Frame = 1 Query: 1 EAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQGAFE 714 EA ML G+A K W+++ ++ G + KPN+V + QVCWEKF Y+ + +N K ++ VDE TI V I+G T TG ++D+K L +L+ + N++T + IHVDAASGG APF+ P+LEWDFRL V SIN SGHKYGLVY GVGWV+WR K LP+EL+F ++YLG + PT +NFS +SQ+I QYY F+R GF+GYK I E A L + +EK G FE Sbjct: 126 EACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCIYWDIEMREVPMDKEHMSINLDKVMDYVDEYTIGVVGIMGITYTGRYDDIKALDNLIEEYNKQTDYKVYIHVDAASGGLYAPFVEPELEWDFRLKNVISINTSGHKYGLVYPGVGWVLWRDKKYLPEELIFKVSYLGGELPTMAINFSHSASQLIGQYYNFVRYGFDGYKAIHERTHKVAMFLAKEIEKTGMFE 365
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: DCEC_LISMO (Probable glutamate decarboxylase gamma OS=Listeria monocytogenes GN=lmo2434 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.460e-58 Identity = 110/240 (45.83%), Postives = 147/240 (61.25%), Query Frame = 1 Query: 1 EAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQGAFE 714 EA ML GLA K +W+ +++G +PN++ + QVCWEKF Y+ + ++ K +LVDE TI V ILG T TG+F+D++LL + + NE IH+D ASG PF+ P+L WDFRL V SIN SGHKYGLVY GVGW++W+ K+ LP EL+F ++YLG PT +NFS+ +SQII QYY F+R GFEGY+ I E A L + +EK G FE Sbjct: 127 EACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPMDKNHLSLDVDKVFDLVDEYTIGVVGILGITYTGKFDDIQLLDEKVEAYNETNEHQLVIHIDGASGAMFTPFVNPELPWDFRLKNVVSINTSGHKYGLVYPGVGWILWKDKEYLPKELIFEVSYLGGSMPTMAINFSRSASQIIGQYYNFLRYGFEGYREIHEKTKKTAIYLAKTVEKSGYFE 366
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: DCEC_LISIN (Probable glutamate decarboxylase gamma OS=Listeria innocua GN=lin2528 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.460e-58 Identity = 110/240 (45.83%), Postives = 146/240 (60.83%), Query Frame = 1 Query: 1 EAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQGAFE 714 EA ML GLA K +W+ +++G +PN++ + QVCWEKF Y+ + ++ K ELVDE TI + ILG T TG+F+D+ LL + + NE IH+D ASG PF+ P+L WDFRL V SIN SGHKYGLVY GVGW++W+ K+ LP EL+F ++YLG PT +NFS+ +SQII QYY F+R GFEGY+ I E A L + +EK G FE Sbjct: 127 EACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMRVVPMDKEHLSLDVEKVFELVDEYTIGIVGILGITYTGKFDDIALLDEKVEAYNEANEHQLVIHIDGASGAMFTPFVNPELPWDFRLKNVVSINTSGHKYGLVYPGVGWILWKDKEYLPKELIFEVSYLGGSMPTMAINFSRSASQIIGQYYNFLRYGFEGYREIHEKTKKTALYLSKTVEKSGYFE 366
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 7.607e-58 Identity = 108/240 (45.00%), Postives = 151/240 (62.92%), Query Frame = 1 Query: 1 EAIMLAGLAFKRKWQQKRKEQGKPY--DKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQGAFE 714 EA ML G+A K W+++ ++ G KPN+V + QVCWEKF Y+ + +N + ++ VDE TI V ILG T TG ++D+ L++ L + N +T + IHVDAASGGF PF+ PD+ WDFRL V SIN SGHKYGLVY G+GWV+W+ + LP+EL+F ++YLG + PT +NFS+ +S II QYY F+R GFEGY+ I + A+ L +E+ G F+ Sbjct: 124 EACMLGGMAMKFAWRKRAEKLGLDIYAQKPNLVISSGYQVCWEKFCVYWDIDMRVVPMDKDHMQLNTDQVLDYVDEYTIGVVGILGITYTGRYDDIYALNEKLEEYNSKTDYKVYIHVDAASGGFFTPFVEPDIIWDFRLKNVISINTSGHKYGLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINFSRSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFD 363
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: DCEB_LISMO (Glutamate decarboxylase beta OS=Listeria monocytogenes GN=gadB PE=3 SV=2) HSP 1 Score: 223.016 bits (567), Expect = 1.298e-57 Identity = 108/240 (45.00%), Postives = 151/240 (62.92%), Query Frame = 1 Query: 1 EAIMLAGLAFKRKWQQKRKEQGKPY--DKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQGAFE 714 EA ML G+A K W+++ ++ G KPN+V + QVCWEKF Y+ + +N + ++ VDE TI V ILG T TG ++D+ L++ L + N +T + IHVDAASGGF PF+ PD+ WDFRL V SIN SGHKYGLVY G+GWV+W+ + LP+EL+F ++YLG + PT +NFS+ +S II QYY F+R GFEGY+ I + A+ L +E+ G F+ Sbjct: 124 EACMLGGMAMKFAWRKRAEKLGLDIYAKKPNLVISSGYQVCWEKFCVYWDIDMRVVPMDKEHMQLNTDQVLDYVDEYTIGVVGILGITYTGRYDDIYALNEKLEEYNSKTDYKVYIHVDAASGGFFTPFVEPDIIWDFRLKNVISINTSGHKYGLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINFSRSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFD 363 The following BLAST results are available for this feature:
BLAST of FC920366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920366 ID=FC920366; Name=FC920366; organism=Citrus clementina; type=EST; length=734bpback to top |