FC920366
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: DCEA_LISMO (Glutamate decarboxylase alpha OS=Listeria monocytogenes GN=gadA PE=3 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 2.447e-56 Identity = 109/240 (45.42%), Postives = 144/240 (60.00%), Query Frame = 1 Query: 1 EAIMLAGLAFKRKWQQKRKEQGKPYD--KPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQGAFE 714 EA ML G+A K +W+ + G KP++V + QVCWEKF Y+ + +N ++ VDE TI + ILG T TG+F+D+ L+DL+ N + IHVD ASG PF+ P LEWDFRLP V SIN SGHKYGLVY GVGW++WR K+ LP+ELVF ++YLG PT +NFS+ +SQII QYY F+R G+EGY+ I A L + + + G FE Sbjct: 122 EACMLGGMAMKFRWRSAALKNGLDIHAKKPSLVISSGYQVCWEKFCVYWDIELREVPMSEEHLSINTDIIMDYVDEYTIGIVGILGITYTGKFDDIMTLNDLVEDYNNTHDNEVVIHVDGASGAMFTPFVEPGLEWDFRLPNVVSINTSGHKYGLVYPGVGWILWRDKEYLPEELVFDVSYLGGHMPTMAINFSRSASQIIGQYYNFLRFGYEGYRQIHMRTRDGALQLSQAVAETGLFE 361
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: DCE_YEAST (Glutamate decarboxylase OS=Saccharomyces cerevisiae GN=GAD1 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.998e-46 Identity = 101/239 (42.26%), Postives = 136/239 (56.90%), Query Frame = 1 Query: 1 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXX-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLT----KKNEETGWDTPIHVDAASGGFIAPF--------LYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARA 678 EAIML GLA K++W+ + K GK KPNI+ + QV EKF RYF +++++P + VDENTI ILG+T TG E+V+ + D+L+ K + + D PIH D ASGGFI PF Y W F P V S+N SGHK+GL G+GWV+WR + L DEL F + YLG + TF LNFS+ Q++ QY+ F+ LG GY+ +N + ARA Sbjct: 156 EAIMLGGLAMKKRWEHRMKNAGKDASKPNIIMSSACQVALEKFTRYFEVECRLVPVSHRSHHMLDPESLWDYVDENTIGCFVILGTTYTGHLENVEKVADVLSQIEAKHPDWSNTDIPIHADGASGGFIIPFGFEKEHMKAYGMERWGFNHPRVVSMNTSGHKFGLTTPGLGWVLWRDESLLADELRFKLKYLGGVEETFGLNFSRPGFQVVHQYFNFVSLGHSGYRTQFQNSLFVARA 394
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: MFNA_UNCMA (L-tyrosine decarboxylase OS=Uncultured methanogenic archaeon RC-I GN=mfnA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17 Identity = 59/172 (34.30%), Postives = 89/172 (51.74%), Query Frame = 1 Query: 190 NPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQG 705 +P + L+D+NTI + A+ G+T G+ + ++ + L + D +HVDAA GGF+ PF+ ++DF +P V+SI + HK GL G +++R+ + L L + YL S T G+S A Y LG GY+ I+ CM N R LRE LE G Sbjct: 146 DPSEMAALIDKNTIALVAVAGTTEFGQIDPIEEIGRLAQEH------DLYLHVDAAFGGFVIPFMDRPAKFDFEIPGVQSITIDPHKMGLSTIPSGGLLYRS-ESLMKVLEINAQYLTSMVQTSLAGTRSGASAASA-YAVLQYLGRAGYREIVATCMENTRILREQLEDMG 309
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: MFNA_METKA (L-tyrosine decarboxylase OS=Methanopyrus kandleri GN=mfnA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.313e-17 Identity = 68/211 (32.23%), Postives = 100/211 (47.39%), Query Frame = 1 Query: 88 IVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVE-LVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL---YPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYL-GSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQG 705 I+ A +EK AR Y V V AV+ L+ +T + I+G+T TG +D++ L D+ E+ G P+HVDAA GGF APFL YP + F L V S+ V HK GLV G +V+R D+ P + + YL G +T+ ++ + ++A Y + LG EGY+ I C + E + G Sbjct: 99 IIVPATRHFSFEKAARMLRMKLVEAPLRSDYTV--DVDAVQDLISRDTALIVGIVGTTETGSVDDIEALSDVA----EDHG--VPLHVDAAFGGFTAPFLREEYPLPRFGFDLEAVVSVTVDPHKMGLVPPPAGGIVFR-DDEFPKAIEVYAPYLSGGGASQYTITGTRPGAPVLALYANILELGEEGYRRIAFRCYEETLKVAEKARELG 300
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: MFNA_METTP (L-tyrosine decarboxylase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=mfnA PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.451e-16 Identity = 49/151 (32.45%), Postives = 78/151 (51.66%), Query Frame = 1 Query: 211 LVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCM 663 L+D+ T+C+ I G+T G+ + + L +L + P+HVDAA GGF+ PFL D WDFR V+SI + HK G+ G +++R+ D L L YL + +L ++ + A Y + LG +GY+ ++ CM Sbjct: 154 LIDDRTVCLVGIAGTTEFGQVDPIGDLSELAIENG------IPLHVDAAFGGFVLPFLEKDCMWDFRAEGVQSITIDPHKMGMSPIPAGGLIFRSSDPL-RRLETETYYLTVSRQA-SLTGTRSGAAAAATYAVIMHLGIDGYRKVVRRCM 296
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: MFNA_ARCFU (L-tyrosine decarboxylase OS=Archaeoglobus fulgidus GN=mfnA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.476e-16 Identity = 60/210 (28.57%), Postives = 97/210 (46.19%), Query Frame = 1 Query: 76 DKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQG 705 + PNIV +EK Y V + + +L+DENT+ + I G+T G+ + + L L ++ E +HVDAA GG + PF+ +DF+ V SI + HK G+ G +++R + L L YL S + FTL ++ + + + Y LGFEG + +++NC+ N R L E + G Sbjct: 99 ENPNIVIPKTAHFSFEKIGDILGVKIKRAGVDEEYKV-DVGQVEDLMDENTVAIVGIAGTTELGQIDPIVELSKLAEERQVE------LHVDAAFGGLVIPFMDNPYPFDFQNRGVSSITIDPHKMGMATIPAGGIIFRNESYL-RALEVETPYLTS-KTQFTLTGTRPGTGVASAYAVLKSLGFEGMREVVKNCLKNTRILVEEMRDLG 299
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: MFNA_METLZ (L-tyrosine decarboxylase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=mfnA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15 Identity = 64/208 (30.77%), Postives = 97/208 (46.63%), Query Frame = 1 Query: 82 PNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQG 705 PNIV A+ ++K Y V + K E+VD+NTI V+AI G+T G +DV+ + + + D HVDAA GG + PFL +DF +P V SI++ HK G+ G ++ R + L YL + + TL ++ + + Y LG EG++ ++ CM N R L EG+E G Sbjct: 110 PNIVVPASAHFSFDKTCDILGLEMRTVPYGKNYTV-DCDKMAEMVDKNTISVSAIAGTTEYGMIDDVERIAKIALEN------DLFFHVDAAFGGMVIPFLPNPAPFDFEVPGVSSISLDPHKMGMSTIPCGCLLLREPEQF-GTLNVDTPYL-TVKKECTLAGTRPGADVAGAYAVIKLLGREGFRAVVAGCMENTRRLIEGMEAFG 308
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: MFNA_METHJ (L-tyrosine decarboxylase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=mfnA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15 Identity = 65/213 (30.52%), Postives = 99/213 (46.48%), Query Frame = 1 Query: 67 KPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQG 705 K +PNI+ A+ +EK A Y M A EL+D+NT C+ + G+T G + + L L ++ +HVDAA GG++ PFL +DF +P V SI V HK GL G ++ R + + LV YL + Q ++L ++ + + A Y LG +G K ++ CM N R + EG+E G Sbjct: 104 KNVKEPNIIVPASAHFSFEK-ACGMMDIEMRVVPVDEQYRMKTDAAGELIDKNTCCIVGVAGTTEYGMTDPIPALGKLAEQEGVH------LHVDAAFGGYVLPFLDDAPPFDFSVPGVGSIAVDPHKMGLSTIPSGVLMVRDERVFCNLLV-ETPYLTTKQ-AYSLTGTRPGASVAAAYAVMAYLGRKGMKALVTGCMENTRRMIEGMEAFG 307
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: MFNA_PYRKO (L-tyrosine decarboxylase OS=Pyrococcus kodakaraensis GN=mfnA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.669e-15 Identity = 55/177 (31.07%), Postives = 84/177 (47.46%), Query Frame = 1 Query: 181 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL----YPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK 699 Y +N + + + TI + I G+T G +D+ L DL + P+HVDAA GGF+ PF Y ++DFRL VKSI + HK G+V G +++R K L V G T+ ++ + +A + LGF+GYK +++ M AR L+K Sbjct: 144 YTVNVKDVEKKITDRTIGIVGIAGTTGLGVVDDIPALSDLALD------YGLPLHVDAAFGGFVIPFAKALGYEIPDFDFRLKGVKSITIDPHKMGMVPIPAGGIIFREKKFLDSISVLAPYLAGGKIWQATITGTRPGANALAVWAMIKHLGFDGYKEVVKEKMELARWFASELKK 314
BLAST of FC920366 vs. ExPASy Swiss-Prot
Match: MFNA_METB6 (L-tyrosine decarboxylase OS=Methanoregula boonei (strain 6A8) GN=mfnA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.669e-15 Identity = 60/213 (28.17%), Postives = 98/213 (46.01%), Query Frame = 1 Query: 67 KPYDKPNIVTGANVQVCWEKFARYFXXXXXXXXXXXGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKQG 705 +P PN+V +V ++K +M KA EL+D+NTIC+ + G+T G + + L + ++ D +HVDAA GG + PFL + +DF LP V ++ V HK G+ G ++ R + D+ D L YL + + +TL ++ + + LG G K ++ CM N L G+E +G Sbjct: 104 RPGSSPNVVLPESVHFSFKKACDLLSLEMRSVPLGTDRRIMAD-KAAELIDKNTICLVGVAGTTEYGMVDPIADLAKIAAQQ------DIFLHVDAAFGGMVIPFLPKPVPFDFALPGVTTLAVDPHKMGMSTIPAGVLLTR-EPDMLDALNIDTPYL-TVKKGYTLGGTRPGAPMAGALAVLDYLGISGMKAVVAGCMKNTERLIAGMETRG 307 The following BLAST results are available for this feature:
BLAST of FC920366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920366 ID=FC920366; Name=FC920366; organism=Citrus clementina; type=EST; length=734bpback to top |