FC920373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 5.855e-56 Identity = 106/166 (63.86%), Postives = 124/166 (74.70%), Query Frame = 2 Query: 140 VCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 V A +S GL+ YY+ I E ++ +R K NL RL+AQRNELN RVR LKEELQ LQEPGS+VGEVVKVMGK KVL+K+ EGKY+V P RVALRNDSY LH ILP+K+DPLV+LMKVEKVPD+TY+M+GGLD+QIKEIKEVIELPI P Sbjct: 14 VVLASSSSASVNGLKNYYIAKIQEKEIVLRDKIENLRRLQAQRNELNGRVRSLKEELQQLQEPGSHVGEVVKVMGKKKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHP 179 HSP 2 Score: 29.261 bits (64), Expect = 5.855e-56 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 1 Query: 628 QHPELFESLGIAQTR 672 +HPELFESLGIAQ + Sbjct: 177 KHPELFESLGIAQPK 191
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 7.054e-55 Identity = 111/176 (63.07%), Postives = 132/176 (75.00%), Query Frame = 2 Query: 161 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKPGCIAIW 688 S +GEG R YY+ I ELQL V +K+ NL RL+AQRNELN++VRML+EELQLLQE GSYVGEVVK M K KVLVKVHPEGK+VV + RVALRN+SY LH ILP+KVDPLV+LM VEKVPDSTY+M+GGLD+QIKEIKEVIELP+ P L +P + ++ Sbjct: 10 STKGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 185
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 2.680e-54 Identity = 106/172 (61.63%), Postives = 132/172 (76.74%), Query Frame = 2 Query: 173 EGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKPGCIAIW 688 +G++ YY I EL+++V +K +L RLEAQRNELN+RVRMLKEELQLL PGS+V EVVK+MGKNKVLVKV+PEGK+VV PSTR AL+++SY LH ILP+K+DPLV+LMKVEK+PDSTYDM+GGLD+QIKEIKEVIELPI P L +P + ++ Sbjct: 14 KGIKSYYCSKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEVVKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLY 185
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 192.971 bits (489), Expect = 1.289e-48 Identity = 96/171 (56.14%), Postives = 123/171 (71.93%), Query Frame = 2 Query: 176 GLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKPGCIAIW 688 G++ Y+ Q I E +L++R KT N+ RLEAQRN LN +VR +K+EL+LLQEPGSYVGEV+K++ KVLVKV PEGKY+V S RV LR+DSY+LH +L +K DPLV+LM VEKVPDSTYDM+GGL +QIKEIKEVIELP+ P L +P + ++ Sbjct: 18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIKIVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILY 188
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.002e-42 Identity = 88/159 (55.35%), Postives = 112/159 (70.44%), Query Frame = 2 Query: 164 KQGEGL-RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 + EG + +Y + L++Q+ +KT L LE +R ELN RVR L+EE+ ++QEP S VG VV+ MGK +VLVK +P+GKY+V RVALR+DSY +H ILP+KVDPLV+LM VEKVPDSTY MIGGLD+QIKEI+EVIELPI P Sbjct: 61 RMAEGFCKNFYSNKLDHLEVQIAKKTKILRVLEQKRAELNRRVRFLREEISIVQEPSSNVGVVVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHP 219 HSP 2 Score: 28.1054 bits (61), Expect = 1.002e-42 Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 1 Query: 628 QHPELFESLGIAQTR 672 +HPELFE+LGIAQ + Sbjct: 217 KHPELFENLGIAQPK 231
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.566e-17 Identity = 49/150 (32.67%), Postives = 83/150 (55.33%), Query Frame = 2 Query: 188 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 Y + I +L+LQVR LEA + L + L+ E+ L++P ++ G V++V+ ++ +V+ + ++VV P TRVAL + + ILP+ DP V +V + P+ TY+ IGGL +Q++E++E IELP+ P Sbjct: 18 YLKRRIRQLELQVRM-------LEADKERLERELSRLRSEMSRLRQPPAFAGSVIEVLDDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHP 160 HSP 2 Score: 22.7126 bits (47), Expect = 3.566e-17 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 628 QHPELFESLGI 660 +HPELFE +GI Sbjct: 158 KHPELFEEVGI 168
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.635e-17 Identity = 49/150 (32.67%), Postives = 84/150 (56.00%), Query Frame = 2 Query: 188 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 Y + I +L+LQVR LEA + L + L+ E+ L++P ++ G V++V+ +++ +V+ + ++VV P TRVAL + + ILP+ DP V +V + P+ TY+ IGGL +Q++E++E IELP+ P Sbjct: 21 YLKRRIRQLELQVRM-------LEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDEDRAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHP 163 HSP 2 Score: 22.7126 bits (47), Expect = 4.635e-17 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 628 QHPELFESLGI 660 +HPELFE +GI Sbjct: 161 KHPELFEEVGI 171
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17 Identity = 57/167 (34.13%), Postives = 83/167 (49.70%), Query Frame = 2 Query: 182 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKP-GCI 679 R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K + + K +VK +YVV P TRVAL + + LP +VDPLV M E + +Y IGGL +QI+E++EVIELP+ P + + P GC+ Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCL 171
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17 Identity = 57/167 (34.13%), Postives = 83/167 (49.70%), Query Frame = 2 Query: 182 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKP-GCI 679 R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K + + K +VK +YVV P TRVAL + + LP +VDPLV M E + +Y IGGL +QI+E++EVIELP+ P + + P GC+ Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCL 171
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17 Identity = 57/167 (34.13%), Postives = 83/167 (49.70%), Query Frame = 2 Query: 182 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKP-GCI 679 R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K + + K +VK +YVV P TRVAL + + LP +VDPLV M E + +Y IGGL +QI+E++EVIELP+ P + + P GC+ Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCL 171 The following BLAST results are available for this feature:
BLAST of FC920373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920373 ID=FC920373; Name=FC920373; organism=Citrus clementina; type=EST; length=689bpback to top |