FC920373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.838e-17 Identity = 57/167 (34.13%), Postives = 83/167 (49.70%), Query Frame = 2 Query: 182 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPNCSSLLE*LKP-GCI 679 R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K + + K +VK +YVV P TRVAL + + LP +VDPLV M E + +Y IGGL +QI+E++EVIELP+ P + + P GC+ Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCL 171
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17 Identity = 44/142 (30.99%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 212 LQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 L ++R+ + +E +R L+ V+ L+ E++ + P + V +V+ ++V VK +V+ P RVAL ++ + +LPS+ DP+V M+VE+ PD +Y+ IGGL++Q++E+KE +ELP+ P Sbjct: 33 LMWKIRKLEKDKLLIENERTRLDREVKSLRGEIERFRTPPLVIATVTEVLDDHRVAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKP 174
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.720e-16 Identity = 48/150 (32.00%), Postives = 82/150 (54.67%), Query Frame = 2 Query: 188 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 Y + I +L+LQVR LEA + L + L+ E+ L++P ++ G V++V+ ++ +V+ + ++VV P RVAL + + +LPS DP V +V + P+ TY+ IGGL +Q++E++E IELP+ P Sbjct: 21 YLKRRIRQLELQVRM-------LEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHP 163 HSP 2 Score: 22.7126 bits (47), Expect = 1.720e-16 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 628 QHPELFESLGI 660 +HPELFE +GI Sbjct: 161 KHPELFEEVGI 171
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.912e-16 Identity = 45/149 (30.20%), Postives = 82/149 (55.03%), Query Frame = 2 Query: 191 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 Y ++ L+ ++RQ + LEA + L + L+ E+ L++P ++ G V++V+ + +V+ + ++VV P RVAL + + +LPS+ DP V +V + P TY+ IGGL++Q++E++E IELP+ P Sbjct: 13 YDDYVTFLKRRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGNVIEVLDDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHP 161 HSP 2 Score: 22.7126 bits (47), Expect = 4.912e-16 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 628 QHPELFESLGI 660 +HPELFE +GI Sbjct: 159 KHPELFEQVGI 169
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 6.382e-16 Identity = 47/159 (29.56%), Postives = 88/159 (55.35%), Query Frame = 2 Query: 161 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 S++ + Y + I +L+LQVR LEA + L + L+ E+ L++P ++ G +++++ +++ +V+ + ++VV P RVAL + + +LPS+ DP V +V + P +Y+ IGGLD+Q++E++E IELP+ P Sbjct: 11 SEEYDDYIMYLKKRIRQLELQVRT-------LEADKERLERELSRLRMEMSRLRQPPAFAGTLIELLDEDRAIVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHP 162 HSP 2 Score: 22.7126 bits (47), Expect = 6.382e-16 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 628 QHPELFESLGI 660 +HPELFE +GI Sbjct: 160 KHPELFEKVGI 170
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16 Identity = 54/168 (32.14%), Postives = 88/168 (52.38%), Query Frame = 2 Query: 164 KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRM-------LKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 K+ E L + H +L+++ R++ LE +R+E L +R L+ +LQ +++P VG V +++ +V+VK K+V P VAL S + +LPS+ D V M+V++ PD +YD IGGLD+QI+EI+EV+E P+ P Sbjct: 35 KRLEELERKLRAHEEKLRIEARRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEILDDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEP 202
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16 Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 170 GEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSR-------VRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 G+ QY L+ + +L+ + RLE ++ + S VR L+ E++ L+ P VG V ++ +V+VK K+VV P RVAL + + +LP+ DP+V +VE+ P+ +Y+ IGGLD QI+EI+E +ELP+ P Sbjct: 2 GDSEIQYLLEKLKKLEEDYYKLRELYRRLEDEKKFIESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKP 164
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.078e-15 Identity = 44/149 (29.53%), Postives = 82/149 (55.03%), Query Frame = 2 Query: 191 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 Y +I L+ ++RQ + LEA + L + L+ E+ L++P ++ G V++V+ ++ +V+ + ++VV P +RVAL + + +LP++ DP V +V + P TY IGGL++Q+ E++E +ELP+ P Sbjct: 13 YEDYITFLKRRIRQLELQVRTLEADKERLERELSRLRTEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHP 161 HSP 2 Score: 22.7126 bits (47), Expect = 1.078e-15 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 628 QHPELFESLGI 660 +HPELFE +GI Sbjct: 159 KHPELFEKVGI 169
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15 Identity = 49/163 (30.06%), Postives = 81/163 (49.69%), Query Frame = 2 Query: 170 GEGLRQYYLQHIH-------ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 GE + QY L+ I EL+ Q RQ +E Q+ +R LK E++ L+ P +G V V+ ++V+V+ +++V P R L S + +LP+ D + M++ + P+ TY+ IGGL+ QI+EI+E +ELP+ P Sbjct: 14 GEDIYQYLLERITNLENRNLELREQFRQMESEKRYVETQKIRYERELRKLKSEIEQLRSPPLVIGTVTDVIDNSRVIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKP 176
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.438e-15 Identity = 49/165 (29.70%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 164 KQGEGLRQYYLQHIH-------ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 ++GE L +Y L+ + EL+ Q+RQ + LE Q+ VR K E++ ++ P +G V ++ +N+V+V+ +++V P R L S + ILP+ D + M+V + P Y+ IGGL++QI EI+E +ELP+ P Sbjct: 12 QKGEDLYRYLLERVTNLEDRNTELREQLRQIEADKRYLETQKVRYEREVRKFKGEIEQMKSPPLVIGTVTDLIDENRVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKP 176 The following BLAST results are available for this feature:
BLAST of FC920373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920373 ID=FC920373; Name=FC920373; organism=Citrus clementina; type=EST; length=689bpback to top |