FC920373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.076e-14 Identity = 46/143 (32.17%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 209 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 EL+ Q+RQ + +E Q+ VR LK E + L+ P +G VV V+ N+V+V+ +++V P R L S + +LPS D V M++ P Y IGGL +QI E++E +ELP+ P Sbjct: 59 ELREQIRQAEADKRYIETQKIRYEREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRP 201
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.712e-14 Identity = 48/155 (30.97%), Postives = 77/155 (49.68%), Query Frame = 2 Query: 173 EGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 E + Y LQH R+ L L +L + +++++ LQ G +GEV+K + + +VK +YVV RV+L + + ILP +VDPLV M +E D ++ +GGL++QI+E++EVIELP+ P Sbjct: 9 EKYKSYLLQH--------REWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNP 155
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.890e-14 Identity = 44/144 (30.56%), Postives = 72/144 (50.00%), Query Frame = 2 Query: 209 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPN 640 EL+ Q+RQ + +E Q+ VR LK E++ L+ P VG + ++ +V+V+ +++V R L S + +LPS D V M++ P TY+ IGGL++QI EI+E +ELP+ P+ Sbjct: 34 ELKEQIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPD 177
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13 Identity = 46/158 (29.11%), Postives = 77/158 (48.73%), Query Frame = 2 Query: 185 QYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSR-------VRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 +Y L + +L+ + + ++E ++ + ++ +R L EL L+ P VG ++ VM K+++K K+VV P +VAL S + +LP+ DP V M+V P+ Y IGGL+ QI E+KE +ELP+ P Sbjct: 25 KYLLDRVKQLEERNVRLKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLIVGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKP 182
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.199e-13 Identity = 44/145 (30.34%), Postives = 74/145 (51.03%), Query Frame = 2 Query: 203 IHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 I EL+ ++ + LE + +L +L+ EL ++ P VG VV +G+ KV+VK ++V P RV L + + +LP D M+V++ P+ Y+ IGGL++Q++EI+EV+ELP+ P Sbjct: 49 IAELESRILKLELEKKELERENLQLMKENEILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHP 193 HSP 2 Score: 22.7126 bits (47), Expect = 1.199e-13 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 628 QHPELFESLGI 660 +HPELFE +GI Sbjct: 191 KHPELFEKVGI 201
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 209 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 E+QL VR + L+ + L + K E++ + P V+ V+ +VLV+ VV P VAL + +LP K DP+V M++ + P+ TY IGGL++QIKE++EV+ELP+ P Sbjct: 16 EVQL-VRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKP 157
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 209 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 E+QL VR + L+ + L + K E++ + P V+ V+ +VLV+ VV P VAL + +LP K DP+V M++ + P+ TY IGGL++QIKE++EV+ELP+ P Sbjct: 16 EVQL-VRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKP 157
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 209 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 E+QL VR + L+ + L + K E++ + P V+ V+ +VLV+ VV P VAL + +LP K DP+V M++ + P+ TY IGGL++QIKE++EV+ELP+ P Sbjct: 16 EVQL-VRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKP 157
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 209 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 E+QL VR + L+ + L + K E++ + P V+ V+ +VLV+ VV P VAL + +LP K DP+V M++ + P+ TY IGGL++QIKE++EV+ELP+ P Sbjct: 16 EVQL-VRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKP 157
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 209 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 E+QL VR + L+ + L + K E++ + P V+ V+ +VLV+ VV P VAL + +LP K DP+V M++ + P+ TY IGGL++QIKE++EV+ELP+ P Sbjct: 16 EVQL-VRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKP 157 The following BLAST results are available for this feature:
BLAST of FC920373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920373 ID=FC920373; Name=FC920373; organism=Citrus clementina; type=EST; length=689bpback to top |