FC920373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12 Identity = 43/156 (27.56%), Postives = 77/156 (49.36%), Query Frame = 2 Query: 173 EGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXX-PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 E ++ LQ+ + ++ + LN+ +L + ++ ++ +Q G +GEV++ + + + +VK +YVV P RV L + + ILP +VDP++ M E +Y IGGL QI+E++EV+ELP+ IP Sbjct: 5 ETKKEQALQNYRDRLIEHKNAELRLNKAHELIKKLKKDFQKTEDHIKTIQYIGEIIGEVLRSLDEERFIVKACNGPRYVVRCANYQDKAHLLVPGARVTLDLTTLTILKILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIP 160
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11 Identity = 44/149 (29.53%), Postives = 72/149 (48.32%), Query Frame = 2 Query: 191 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 YL + L++ K ++ R Q + N +LK EL L+ P +G V+ + + K +VK ++V P RV L + + +LP + D M++E+ PD + IGGL+ QI++IKEV+ELP+ P Sbjct: 26 YLAELESKVLRLELKNKDITRENVQIKKENE---ILKRELDKLRIPPLILGTVLDRVNERKAVVKSSTGPNFLVNLSQFVEPDDIVPGARVCLNQQTLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNP 171
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11 Identity = 41/140 (29.29%), Postives = 72/140 (51.43%), Query Frame = 2 Query: 218 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 L++ K +++R Q + N +LK EL L+ P +G ++ + + K +VK ++V P RV L + + +LP + D M++E+ PD +++ IGGL+ QI++IKEV+ELP+ P Sbjct: 35 LRLELKNKDISRENVQIKKENE---ILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNP 171
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.645e-11 Identity = 41/140 (29.29%), Postives = 72/140 (51.43%), Query Frame = 2 Query: 218 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 L++ K +++R Q + N +LK EL L+ P +G ++ + + K +VK ++V P RV L + + +LP + D M++E+ PD +++ IGGL+ QI++IKEV+ELP+ P Sbjct: 35 LRLELKNKDISRENVQIKKENE---ILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNP 171
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.715e-11 Identity = 51/176 (28.98%), Postives = 80/176 (45.45%), Query Frame = 2 Query: 110 KQPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 K PE+AA K LR L+ I + L + N RL+ Q + + ++ L+ VG + +++ +N +V +Y V P + + N + IL +VDP+V++MKVEK P +Y IGGL+ QI+EIKE +ELP+ P Sbjct: 44 KGPEAAARLPTVTPSTKCK----LRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEED----RSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHP 211 HSP 2 Score: 21.557 bits (44), Expect = 1.715e-11 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 1 Query: 631 HPELFESLGI 660 HPEL+E +GI Sbjct: 210 HPELYEDIGI 219
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.715e-11 Identity = 51/176 (28.98%), Postives = 80/176 (45.45%), Query Frame = 2 Query: 110 KQPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 K PE+AA K LR L+ I + L + N RL+ Q + + ++ L+ VG + +++ +N +V +Y V P + + N + IL +VDP+V++MKVEK P +Y IGGL+ QI+EIKE +ELP+ P Sbjct: 44 KGPEAAARLPTVTPSTKCK----LRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEED----RSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHP 211 HSP 2 Score: 21.557 bits (44), Expect = 1.715e-11 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 1 Query: 631 HPELFESLGI 660 HPEL+E +GI Sbjct: 210 HPELYEDIGI 219
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11 Identity = 41/140 (29.29%), Postives = 71/140 (50.71%), Query Frame = 2 Query: 218 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 L++ K ++ R Q + N +LK EL L+ P +G ++ + + K +VK ++V P RV L + + +LP + D M++E+ PD +++ IGGL+ QI++IKEV+ELP+ P Sbjct: 35 LRLELKNKDVTRENVQIKKENE---ILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNP 171
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11 Identity = 42/144 (29.17%), Postives = 68/144 (47.22%), Query Frame = 2 Query: 209 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIPN 640 E +++R + L ++ L + K E+ L P V++V+ N+V+VK +V P VAL N + +LP + DPLV M+VE+ P + +GGL++QI+EI E + LPI P+ Sbjct: 20 ERDVEIRILKDKVRSLTKEKISLQKELEYYKNEITKLLSPPYIEAVVLEVIDDNRVVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPH 163
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11 Identity = 44/157 (28.03%), Postives = 74/157 (47.13%), Query Frame = 2 Query: 167 QGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 + E ++ Y L +Q Q R K R E +R +++ L+ VG + +++ +V + ++ V P V L + ++ + +L DP+V++MK+EK P TY +GGLDQQI+EIKE +ELP+ P Sbjct: 67 KSERIKDYLLMEQEFIQNQERLKPQE-ERQEEERAKVDE-----------LRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHP 211
BLAST of FC920373 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.753e-11 Identity = 43/153 (28.10%), Postives = 79/153 (51.63%), Query Frame = 2 Query: 179 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPINIP 637 L+Q L+ I + L ++ N + + + +E NS+ + ++ ++ L+ VG + +++ N +V ++ V V L N + + ++ +VDP+VN+MKVEK P +Y IGGL+ Q++E+KE IELP+ P Sbjct: 56 LKQLKLERIKDYLLMEQEFLQNYDLNQPKVDE-NSKEQADEKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHP 207 HSP 2 Score: 21.557 bits (44), Expect = 3.753e-11 Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 1 Query: 631 HPELFESLGI 660 HPEL+E +GI Sbjct: 206 HPELYEEIGI 215 The following BLAST results are available for this feature:
BLAST of FC920373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920373 ID=FC920373; Name=FC920373; organism=Citrus clementina; type=EST; length=689bpback to top |