FC920374

Overview
NameFC920374
Unique NameFC920374
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length344
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 6.210e-42
Identity = 81/108 (75.00%), Postives = 96/108 (88.89%), Query Frame = 2 
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSPI 337
            GE+NVLIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ +
Sbjct:  188 GERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKV 295
[Close]
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 6.210e-42
Identity = 81/108 (75.00%), Postives = 96/108 (88.89%), Query Frame = 2 
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSPI 337
            GE+NVLIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ +
Sbjct:  188 GERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKV 295
[Close]
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: HSP72_DROSI (Major heat shock 70 kDa protein Ba OS=Drosophila simulans GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 6.210e-42
Identity = 81/108 (75.00%), Postives = 96/108 (88.89%), Query Frame = 2 
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSPI 337
            GE+NVLIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ +
Sbjct:  188 GERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKV 295
[Close]
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 6.210e-42
Identity = 81/108 (75.00%), Postives = 96/108 (88.89%), Query Frame = 2 
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSPI 337
            GE+NVLIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ +
Sbjct:  188 GERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKV 295
[Close]
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: HSP71_DROSI (Major heat shock 70 kDa protein Ab OS=Drosophila simulans GN=Hsp70Ab PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 6.210e-42
Identity = 81/108 (75.00%), Postives = 96/108 (88.89%), Query Frame = 2 
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSPI 337
            GE+NVLIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ +
Sbjct:  188 GERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKV 295
[Close]
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 168.318 bits (425), Expect = 1.059e-41
Identity = 81/108 (75.00%), Postives = 95/108 (87.96%), Query Frame = 2 
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSPI 337
            GE+NVLIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H   EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ +
Sbjct:  188 GERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLADEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKV 295
[Close]
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 1.059e-41
Identity = 81/108 (75.00%), Postives = 95/108 (87.96%), Query Frame = 2 
Query:   17 GEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSPI 337
            GE+NVLIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H   EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFY+ +
Sbjct:  188 GERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLADEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKV 295
[Close]
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: HSP72_PARLI (Heat shock 70 kDa protein II (Fragment) OS=Paracentrotus lividus GN=HSP70II PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.807e-41
Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = 2 
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSPI 337
            E+NVLIFDL GGTFDVS+LTIEEGIFEVK+T+ DTHLGGEDFDNRMV H   EFKRK+KKDI+ N RA+RRLRTACERAKRTLSS+ Q  IEIDSL+EGID+Y+ +
Sbjct:  192 ERNVLIFDLVGGTFDVSVLTIEEGIFEVKSTSRDTHLGGEDFDNRMVTHSSPEFKRKHKKDITPNKRAVRRLRTACERAKRTLSSSTQAKIEIDSLFEGIDYYTSV 297
[Close]
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.807e-41
Identity = 84/107 (78.50%), Postives = 94/107 (87.85%), Query Frame = 2 
Query:   20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSPI 337
            E+NVLIFDLGGGTFDV+LLTI+ GIFEVKAT GDTHLGGEDFDNR+V HF  EFKRKNK KD+S N RALRRLRTACERAKRTLSS AQ TIEID+L++ +DF + I
Sbjct:  194 ERNVLIFDLGGGTFDVTLLTIDGGIFEVKATNGDTHLGGEDFDNRLVAHFTDEFKRKNKGKDLSTNLRALRRLRTACERAKRTLSSAAQATIEIDALFDNVDFQATI 300
[Close]
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: HSP75_SCHPO (Heat shock protein sks2 OS=Schizosaccharomyces pombe GN=sks2 PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 2.360e-41
Identity = 84/111 (75.68%), Postives = 92/111 (82.88%), Query Frame = 2 
Query:    5 ATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSPI 337
            A S   KNVLIFDLGGGTFDVSLL I+ G+FEV ATAGDTHLGGEDFDN +V HF+QEFKRK K DIS +PRALRRLR+ACERAKR LSS  QTT+E+DSL  GIDF S I
Sbjct:  189 AKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSI 299
The following BLAST results are available for this feature:
BLAST of FC920374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP75_DROME6.210e-4275.00Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP73_DROME6.210e-4275.00Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_DROSI6.210e-4275.00Major heat shock 70 kDa protein Ba OS=Drosophila s... [more]
HSP72_DROME6.210e-4275.00Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]
HSP71_DROSI6.210e-4275.00Major heat shock 70 kDa protein Ab OS=Drosophila s... [more]
HSP71_DROME1.059e-4175.00Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_DROME1.059e-4175.00Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]
HSP72_PARLI1.807e-4177.36Heat shock 70 kDa protein II (Fragment) OS=Paracen... [more]
HSP70_TRYCR1.807e-4178.50Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HSP75_SCHPO2.360e-4175.68Heat shock protein sks2 OS=Schizosaccharomyces pom... [more]

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Properties
Property NameValue
Genbank descriptionC32007E06EF RVDevelop1 Citrus clementina cDNA clone C32007E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920374 ID=FC920374; Name=FC920374; organism=Citrus clementina; type=EST; length=344bp
GAAGGCTACTAGTGTGGGTGAGAAGAATGTGTTGATCTTTGATCTGGGTG
GCGGTACTTTTGATGTGTCGTTGCTCACTATTGAGGAGGGAATCTTTGAA
GTGAAGGCTACTGCTGGAGACACTCATCTTGGTGGTGAGGATTTTGATAA
CAGAATGGTGAATCATTTTGTTCAGGAGTTTAAGAGGAAGAACAAGAAGG
ATATTAGCGGTAACCCTAGAGCTCTTAGGAGATTGAGGACTGCTTGTGAG
AGAGCGAAGAGGACTCTCTCCTCTACTGCCCAGACTACAATTGAGATTGA
TTCTTTGTATGAGGGTATTGACTTCTACTCACCCATACTCGTGC
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