FC920374
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: GRP78_PONAB (78 kDa glucose-regulated protein OS=Pongo abelii GN=HSPA5 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.174e-32 Identity = 65/103 (63.11%), Postives = 82/103 (79.61%), Query Frame = 2 Query: 17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDF 325 GEKN+L+FDLGGGTFDVSLLTI+ G+FEV AT GDTHLGGEDFD R++ HF++ +K+K KD+ + RA+++LR E+AKR LSS Q IEI+S YEG DF Sbjct: 216 GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDF 318
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: GRP78_HUMAN (78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 1.174e-32 Identity = 65/103 (63.11%), Postives = 82/103 (79.61%), Query Frame = 2 Query: 17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDF 325 GEKN+L+FDLGGGTFDVSLLTI+ G+FEV AT GDTHLGGEDFD R++ HF++ +K+K KD+ + RA+++LR E+AKR LSS Q IEI+S YEG DF Sbjct: 216 GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDF 318
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: GRP78_BOVIN (78 kDa glucose-regulated protein OS=Bos taurus GN=HSPA5 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.174e-32 Identity = 65/103 (63.11%), Postives = 82/103 (79.61%), Query Frame = 2 Query: 17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDF 325 GEKN+L+FDLGGGTFDVSLLTI+ G+FEV AT GDTHLGGEDFD R++ HF++ +K+K KD+ + RA+++LR E+AKR LSS Q IEI+S YEG DF Sbjct: 217 GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFYEGEDF 319
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: HSP7C_DROME (Heat shock 70 kDa protein cognate 3 OS=Drosophila melanogaster GN=Hsc70-3 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 2.615e-32 Identity = 65/103 (63.11%), Postives = 83/103 (80.58%), Query Frame = 2 Query: 17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDF 325 GEKNVL+FDLGGGTFDVSLLTI+ G+FEV AT GDTHLGGEDFD R+++HF++ +K+K KDI + RA+++LR E+AKR LS + Q IEI+S +EG DF Sbjct: 216 GEKNVLVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLYKKKKGKDIRKDNRAVQKLRREVEKAKRALSGSHQVRIEIESFFEGDDF 318
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.615e-32 Identity = 63/103 (61.17%), Postives = 83/103 (80.58%), Query Frame = 2 Query: 17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDF 325 GEKN+L+FDLGGGTFDVSLLTI+ G+FEV AT GDTHLGGEDFD R++ HF++ +K+K KD+ + RA+++LR E+AKR LS+ Q+ IEI+S +EG DF Sbjct: 217 GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRADKRAVQKLRREVEKAKRALSAQHQSRIEIESFFEGEDF 319
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: GRP78_RAT (78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.415e-32 Identity = 64/103 (62.14%), Postives = 82/103 (79.61%), Query Frame = 2 Query: 17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDF 325 GEKN+L+FDLGGGTFDVSLLTI+ G+FEV AT GDTHLGGEDFD R++ HF++ +K+K KD+ + RA+++LR E+AKR LSS Q IEI+S +EG DF Sbjct: 216 GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDF 318
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: GRP78_MOUSE (78 kDa glucose-regulated protein OS=Mus musculus GN=Hspa5 PE=1 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 3.415e-32 Identity = 64/103 (62.14%), Postives = 82/103 (79.61%), Query Frame = 2 Query: 17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDF 325 GEKN+L+FDLGGGTFDVSLLTI+ G+FEV AT GDTHLGGEDFD R++ HF++ +K+K KD+ + RA+++LR E+AKR LSS Q IEI+S +EG DF Sbjct: 217 GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDF 319
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: GRP78_MESAU (78 kDa glucose-regulated protein OS=Mesocricetus auratus GN=HSPA5 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.415e-32 Identity = 64/103 (62.14%), Postives = 82/103 (79.61%), Query Frame = 2 Query: 17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDF 325 GEKN+L+FDLGGGTFDVSLLTI+ G+FEV AT GDTHLGGEDFD R++ HF++ +K+K KD+ + RA+++LR E+AKR LSS Q IEI+S +EG DF Sbjct: 216 GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDF 318
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.415e-32 Identity = 64/103 (62.14%), Postives = 82/103 (79.61%), Query Frame = 2 Query: 17 GEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDF 325 GEKN+L+FDLGGGTFDVSLLTI+ G+FEV AT GDTHLGGEDFD R++ HF++ +K+K KD+ + RA+++LR E+AKR LSS Q IEI+S +EG DF Sbjct: 214 GEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDF 316
BLAST of FC920374 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.609e-32 Identity = 66/102 (64.71%), Postives = 81/102 (79.41%), Query Frame = 2 Query: 20 EKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDF 325 EK+++++DLGGGTFDVSLLTI G FEV ATAGDTHLGGEDFD R+V HF++ FK+K+ DIS N +AL +L+ E+AKRTLSS T IEIDS +GIDF Sbjct: 227 EKHIIVYDLGGGTFDVSLLTIAGGAFEVLATAGDTHLGGEDFDYRVVRHFIKVFKKKHGIDISDNSKALAKLKREVEKAKRTLSSQMSTRIEIDSFVDGIDF 328 The following BLAST results are available for this feature:
BLAST of FC920374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920374 ID=FC920374; Name=FC920374; organism=Citrus clementina; type=EST; length=344bpback to top |