FC920380

Overview
NameFC920380
Unique NameFC920380
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ANKR2_HUMAN (Ankyrin repeat domain-containing protein 2 OS=Homo sapiens GN=ANKRD2 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.149e-12
Identity = 45/128 (35.16%), Postives = 72/128 (56.25%), Query Frame = 2
Query:  299 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEV 682
            RT LH A+  GH E++E LL   ++   V+  D      +H A   G++ +V++L S GAD N+++    T LH A   G ++IVE  +S G +IN++D+ G TALH         + +LL+  GA++
Sbjct:  182 RTALHRASLEGHMEILEKLL---DNGATVDFQDRLDCTAMHWACRGGHLEVVKLLQSHGADTNVRDKLLSTPLHVAVRTGQVEIVEHFLSLGLEINARDREGDTALHDAVRLNRYKIIKLLLLHGADM 306          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ANKH_CHRVI (Ankyrin homolog OS=Chromatium vinosum PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.149e-12
Identity = 51/129 (39.53%), Postives = 66/129 (51.16%), Query Frame = 2
Query:  302 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDA 688
            T L  AA  GH  +  +LL   E    V+     GW  +  A+  G   +VE LL KGAD    +  GRTAL  AASKG   ++ LLI  GA + ++DK G TAL   A  G +   E L   GA++DA
Sbjct:  100 TPLTFAAEAGHIGISALLL---ERGAHVHDRTRSGWDALMIASRHGITDMVEQLLFKGADPKAADREGRTALMQAASKGETGVLPLLIEGGADLEARDKQGATALLIAADQGQAGAVETLAGLGAQLDA 225          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ZDH22_ARATH (S-acyltransferase TIP1 OS=Arabidopsis thaliana GN=TIP1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 2
Query:  299 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSK-GADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685
            +T LH +A  G  +V E+LL   E A V +A D  G+   H AA  G    +  ++SK  AD ++ ++ GR+ LH+AA KG+   + LL+   A    +DK GCT LH  A  GN   C +L++ G + D
Sbjct:   99 QTALHWSAVRGAIQVAELLLQ--EGARV-DATDMYGYQATHVAAQYGQTAFLCHVVSKWNADPDVPDNDGRSPLHWAAYKGFADSIRLLLFLDAYRGRQDKEGCTPLHWAAIRGNLEACTVLVQAGKKED 225          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: MIB2_RAT (E3 ubiquitin-protein ligase MIB2 OS=Rattus norvegicus GN=Mib2 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 50/134 (37.31%), Postives = 69/134 (51.49%), Query Frame = 2
Query:  299 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHR--GASTGNSALCELLIE-EGAEVDAT 691
            RT L VAA  G  E+V +LL    S   V+ +DEEG   +H  A         +LLS G  V+ +N    TALH A  +G+L++V++L   G  +N  D    T LH    A  G S++ E+L E  G +V AT
Sbjct:  480 RTALQVAAYLGQVELVRLLLQARAS---VDLLDEEGNTALHYTAMGNQPEATRLLLSAGCGVDAQNGTRSTALHVAVQRGFLEVVKILCEHGCDVNLPDAHADTPLHSAISAGAGASSIVEVLTEVPGIDVTAT 610          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: INVS_HUMAN (Inversin OS=Homo sapiens GN=INVS PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 47/133 (35.34%), Postives = 74/133 (55.64%), Query Frame = 2
Query:  299 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKI--NSKDKVGCTALHRGASTGNSALCELLIEEGAEVDAT 691
            RT LH AA  GH ++V +LL  ++S  + +  D +G  P+H AA       V++ L   +  +  +  GRT+  +AA KG   ++  ++S  + I  N  DK G TALH  A +G+ +  +LL+E  A+VDAT
Sbjct:  256 RTPLHWAALLGHAQIVHLLLERNKSGTIPS--DSQGATPLHYAAQSNFAETVKVFLKHPSVKDDSDLEGRTSFMWAAGKGSDDVLRTMLSLKSDIDINMADKYGGTALHAAALSGHVSTVKLLLENNAQVDAT 386          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: INVS_CANFA (Inversin OS=Canis familiaris GN=INVS PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 47/133 (35.34%), Postives = 74/133 (55.64%), Query Frame = 2
Query:  299 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKI--NSKDKVGCTALHRGASTGNSALCELLIEEGAEVDAT 691
            RT LH AA  GH ++V +LL  ++S  + +  D +G  P+H AA       V++ L   +  +  +  GRT+  +AA KG   ++  ++S  + I  N  DK G TALH  A +G+ +  +LL+E  A+VDAT
Sbjct:  256 RTPLHWAALLGHAQIVHLLLERNKSGTIPS--DSQGATPLHYAAQSNFAETVKVFLKHPSVKDDSDLEGRTSFMWAAGKGSDDVLRTMLSLKSDIDINMADKYGGTALHAAALSGHVSTVKLLLENNAQVDAT 386          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: FANK1_HUMAN (Fibronectin type 3 and ankyrin repeat domains protein 1 OS=Homo sapiens GN=FANK1 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 41/114 (35.96%), Postives = 67/114 (58.77%), Query Frame = 2
Query:  347 EILLSVDESANV-VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685
            ++L+ + +   V V+  ++ G+  +  AA  G   +V++L+S G DVNLKN  G+ +L  A   G L +V+ L   GA   ++D  GCTALH  A  G+ ++ E +I++G EVD
Sbjct:  124 DLLVRILQGGRVKVDVPNKFGFTALMVAAQKGYTRLVKILVSNGTDVNLKNGSGKDSLMLACYAGHLDVVKYLRRHGASWQARDLGGCTALHWAADGGHCSVIEWMIKDGCEVD 237          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: EHMT2_MOUSE (Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 OS=Mus musculus GN=Ehmt2 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 2
Query:  284 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGA 676
            + +D  T LH AA  G+ E+V +LLS  +    VNA D  GW PI  AA   ++ ++ MLL++GADV L ++     LH+A+  G   I E+L++    +++ +  G T LH  A         L +  GA
Sbjct:  800 KEEDGSTCLHHAAKIGNLEMVSLLLSTGQVD--VNAQDSGGWTPIIWAAEHKHIDVIRMLLTRGADVTLTDNEENICLHWASFTGSAAIAEVLLNAQCDLHAVNYHGDTPLHIAARESYHDCVLLFLSRGA 928          

HSP 2 Score: 70.0922 bits (170), Expect = 1.271e-11
Identity = 46/161 (28.57%), Postives = 76/161 (47.20%), Query Frame = 2
Query:  299 RTLLHVAASCGHPEVVEILLSVDESANVVN------------------------------AVDEEGWAPIHSAASIGNVTIVEMLLSKG-ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDA 688
            RT LH AA  G  E+  +LL    + N V+                              + +E+G   +H AA IGN+ +V +LLS G  DVN ++ GG T + +AA    + ++ +L++RGA +   D      LH  + TG++A+ E+L+    ++ A
Sbjct:  739 RTPLHAAAQKGSVEICHVLLQAGANINAVDKQQRTPLMEAVVNNHLEVARYMVQLGGCVYSKEEDGSTCLHHAAKIGNLEMVSLLLSTGQVDVNAQDSGGWTPIIWAAEHKHIDVIRMLLTRGADVTLTDNEENICLHWASFTGSAAIAEVLLNAQCDLHA 899          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: EHMT2_HUMAN (Histone-lysine N-methyltransferase, H3 lysine-9 specific 3 OS=Homo sapiens GN=EHMT2 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 2
Query:  284 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGA 676
            + +D  T LH AA  G+ E+V +LLS  +    VNA D  GW PI  AA   ++ ++ MLL++GADV L ++     LH+A+  G   I E+L++    +++ +  G T LH  A         L +  GA
Sbjct:  747 KEEDGSTCLHHAAKIGNLEMVSLLLSTGQVD--VNAQDSGGWTPIIWAAEHKHIEVIRMLLTRGADVTLTDNEENICLHWASFTGSAAIAEVLLNARCDLHAVNYHGDTPLHIAARESYHDCVLLFLSRGA 875          

HSP 2 Score: 70.8626 bits (172), Expect = 7.448e-12
Identity = 46/161 (28.57%), Postives = 77/161 (47.83%), Query Frame = 2
Query:  299 RTLLHVAASCGHPEVVEILLSVDESANVVN------------------------------AVDEEGWAPIHSAASIGNVTIVEMLLSKG-ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDA 688
            RT LH AA  G  E+  +LL    + N V+                              + +E+G   +H AA IGN+ +V +LLS G  DVN ++ GG T + +AA    ++++ +L++RGA +   D      LH  + TG++A+ E+L+    ++ A
Sbjct:  686 RTPLHAAAQKGSVEICHVLLQAGANINAVDKQQRTPLMEAVVNNHLEVARYMVQRGGCVYSKEEDGSTCLHHAAKIGNLEMVSLLLSTGQVDVNAQDSGGWTPIIWAAEHKHIEVIRMLLTRGADVTLTDNEENICLHWASFTGSAAIAEVLLNARCDLHA 846          
BLAST of FC920380 vs. ExPASy Swiss-Prot
Match: ANR27_HUMAN (Ankyrin repeat domain-containing protein 27 OS=Homo sapiens GN=ANKRD27 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12
Identity = 47/132 (35.61%), Postives = 68/132 (51.52%), Query Frame = 2
Query:  287 NDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEV 682
            + D  + LHVAA  G  +++ +LL    +A   NA   +   P+H A   G+  +V+ LL   A  N K+  G T L YA S G  ++V LL+  GA IN+ +  G TALH      +  + ELL+  GA V
Sbjct:  741 SQDGSSPLHVAALHGRADLIPLLLKHGANAGARNA---DQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASV 869          

HSP 2 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 42/137 (30.66%), Postives = 69/137 (50.36%), Query Frame = 2
Query:  284 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLI---SRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVD 685
            R+D   T LHVAA CG   ++++L+S      +VNA D  G  P+H A   G  ++  +LL   A   ++++ G T LH A + G    V+ L+       +++  ++ G T LH  A  G   + E L++ GA  +
Sbjct:  459 RDDRGHTPLHVAAVCGQASLIDLLVS---KGAMVNATDYHGATPLHLACQKGYQSVTLLLLHYKASAEVQDNNGNTPLHLACTYGHEDCVKALVYYDVESCRLDIGNEKGDTPLHIAARWGYQGVIETLLQNGASTE 592          
The following BLAST results are available for this feature:
BLAST of FC920380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
ANKR2_HUMAN1.149e-1235.16Ankyrin repeat domain-containing protein 2 OS=Homo... [more]
ANKH_CHRVI1.149e-1239.53Ankyrin homolog OS=Chromatium vinosum PE=4 SV=1[more]
ZDH22_ARATH1.501e-1236.92S-acyltransferase TIP1 OS=Arabidopsis thaliana GN=... [more]
MIB2_RAT1.501e-1237.31E3 ubiquitin-protein ligase MIB2 OS=Rattus norvegi... [more]
INVS_HUMAN1.501e-1235.34Inversin OS=Homo sapiens GN=INVS PE=1 SV=2[more]
INVS_CANFA1.501e-1235.34Inversin OS=Canis familiaris GN=INVS PE=1 SV=1[more]
FANK1_HUMAN1.501e-1235.96Fibronectin type 3 and ankyrin repeat domains prot... [more]
EHMT2_MOUSE1.501e-1234.35Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
EHMT2_HUMAN1.501e-1234.35Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
ANR27_HUMAN1.501e-1235.61Ankyrin repeat domain-containing protein 27 OS=Hom... [more]

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Properties
Property NameValue
Genbank descriptionC32007F01EF RVDevelop1 Citrus clementina cDNA clone C32007F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920380 ID=FC920380; Name=FC920380; organism=Citrus clementina; type=EST; length=691bp
GGGGAAGGAGTAAAGTGACGAACCGCGCACCGGGTGAGAACCGGACACAA
CCGAACCGCACCATACCATTGCGCACCGCTTTCGACTTGCAACTAGCTCG
CCGCTGGACCAAATCACACCGTCAAAACTCTAATTCTCGGCAAATTGACA
GTACAATTCCGGTATGGACATGGACATCGATCAAACAATCAAGGACAAAG
ACCTCTTCAAAGCCGCCGAAACTGGAGATTCCTCAACATTCAAATCCCTC
TCAAAACAGCAGCTCTTAAAATCTCTCTCCTTGCGGAACGACGACGACCG
CACCCTCCTCCACGTCGCCGCCTCATGTGGTCACCCCGAGGTGGTGGAAA
TATTGTTGAGTGTTGATGAGTCGGCGAATGTAGTAAACGCTGTTGATGAA
GAAGGGTGGGCTCCGATTCATTCTGCGGCTAGCATTGGCAATGTGACAAT
CGTGGAAATGTTGTTAAGCAAAGGAGCTGATGTAAATTTGAAGAATGATG
GTGGGCGAACCGCTCTTCACTATGCTGCCAGCAAGGGATGGTTGAAGATT
GTGGAACTTCTGATCTCACGTGGTGCAAAAATTAACTCCAAGGACAAGGT
TGGTTGCACAGCATTGCACCGGGGAGCTAGTACAGGGAATTCAGCATTGT
GTGAACTCTTAATTGAAGAAGGAGCAGAGGTTGATGCTACT
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