FC920381

Overview
NameFC920381
Unique NameFC920381
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length547
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9375 contig Ccv1_Contig9375:1..547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920381 vs. ExPASy Swiss-Prot
Match: BZW2_MUSMM (Basic leucine zipper and W2 domain-containing protein 2 OS=Mus musculus molossinus GN=Bzw2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.959e-14
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 2
Query:  125 MSSKEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIES--SDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGER---HSYSIIDCEPQREAILPSVIYIQKILRRKPFLIKNLRNVTRRFMQSLELFEE 544
            M+  +KP L G R K RKR+     +P  F D +VQ   +   DLE +AK ++S  S L++ RY DT F+++  G    PG T+ D+G++    ++ +       E I        K++RR  +L K   +  ++ +  L+ F E
Sbjct:    1 MNKHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFLKAFSE 145          
BLAST of FC920381 vs. ExPASy Swiss-Prot
Match: BZW2_MOUSE (Basic leucine zipper and W2 domain-containing protein 2 OS=Mus musculus GN=Bzw2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.959e-14
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 2
Query:  125 MSSKEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIES--SDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGER---HSYSIIDCEPQREAILPSVIYIQKILRRKPFLIKNLRNVTRRFMQSLELFEE 544
            M+  +KP L G R K RKR+     +P  F D +VQ   +   DLE +AK ++S  S L++ RY DT F+++  G    PG T+ D+G++    ++ +       E I        K++RR  +L K   +  ++ +  L+ F E
Sbjct:    1 MNKHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFLKAFSE 145          
BLAST of FC920381 vs. ExPASy Swiss-Prot
Match: BZW2_MACFA (Basic leucine zipper and W2 domain-containing protein 2 OS=Macaca fascicularis GN=BZW2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.959e-14
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 2
Query:  125 MSSKEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIES--SDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGER---HSYSIIDCEPQREAILPSVIYIQKILRRKPFLIKNLRNVTRRFMQSLELFEE 544
            M+  +KP L G R K RKR+     +P  F D +VQ   +   DLE +AK ++S  S L++ RY DT F+++  G    PG T+ D+G++    ++ +       E I        K++RR  +L K   +  ++ +  L+ F E
Sbjct:    1 MNKHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFLKAFSE 145          
BLAST of FC920381 vs. ExPASy Swiss-Prot
Match: BZW2_HUMAN (Basic leucine zipper and W2 domain-containing protein 2 OS=Homo sapiens GN=BZW2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.959e-14
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 2
Query:  125 MSSKEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIES--SDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGER---HSYSIIDCEPQREAILPSVIYIQKILRRKPFLIKNLRNVTRRFMQSLELFEE 544
            M+  +KP L G R K RKR+     +P  F D +VQ   +   DLE +AK ++S  S L++ RY DT F+++  G    PG T+ D+G++    ++ +       E I        K++RR  +L K   +  ++ +  L+ F E
Sbjct:    1 MNKHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFLKAFSE 145          
BLAST of FC920381 vs. ExPASy Swiss-Prot
Match: BZW1B_DANRE (Basic leucine zipper and W2 domain-containing protein 1-B OS=Danio rerio GN=bzw1b PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 6.476e-14
Identity = 42/140 (30.00%), Postives = 71/140 (50.71%), Query Frame = 2
Query:  134 KEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIESS--DLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHSYSIIDCEPQREAILPSVIYIQKILRRKPFLIKNLRNVTRRFMQSLELFEEN 547
            ++KPTL G R K RKR+     DP+ F +++VQ       DLE +AK ++SS   L++ RY +T F+++  GG   PG    D+  R  Y +   +   + +        K++RR  +L K      ++ +  L+ F E+
Sbjct:    6 QQKPTLTGQRFKTRKRDEKERFDPSQFQESIVQGLNQTGTDLEAVAKFLDSSGAKLDYRRYAETLFDILVAGGMLAPGGALSDDMTRTKYCVFTAQEDIKTMKAYAQVFNKLIRRYKYLEKGFEEEIKKLLLFLKGFSES 145          
BLAST of FC920381 vs. ExPASy Swiss-Prot
Match: EXBA_DROME (Protein extra bases OS=Drosophila melanogaster GN=exba PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.105e-13
Identity = 48/127 (37.80%), Postives = 68/127 (53.54%), Query Frame = 2
Query:  125 MSSK-EKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIES--SDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGE--RHSYSIIDCEPQREAILPSVIYIQKILRRKPFLIK 490
            MS K E+P L G RIK RKR+     DP  F DAV+       GDLE I+K ++S  + L++ RYG+  F+++  GG   PG +   +GE  R SY I D     E++        K++RR  +L K
Sbjct:    1 MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPESMESMRNHEQVFVKLIRRYKYLEK 127          
BLAST of FC920381 vs. ExPASy Swiss-Prot
Match: BZW2_DANRE (Basic leucine zipper and W2 domain-containing protein 2 OS=Danio rerio GN=bzw2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.221e-12
Identity = 41/143 (28.67%), Postives = 71/143 (49.65%), Query Frame = 2
Query:  134 KEKPTLGGTRIKPRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELIAKCIE--SSDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGER---HSYSIIDCEPQREAILPSVIYIQKILRRKPFLIKNLRNVTRRFMQSLELFEEN 547
            ++KP L G R K RKR+     +P  F D +VQ   +  GDL+ +AK ++   S L++ RY DT F+++  G    PG T+ D+ ++     + + + E     I        K++RR  +L K      ++ +  L+ F E+
Sbjct:    6 QQKPVLTGQRFKTRKRDEKEKFEPTVFRDTIVQGLNEAGGDLDALAKFLDVTGSRLDYRRYADTLFDILIAGSMLAPGGTRIDDADKTKVTQHCVFNAEENHTTIRSYAQVFNKLIRRYKYLEKAFEEEIKKLLLFLKGFTES 148          
The following BLAST results are available for this feature:
BLAST of FC920381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
BZW2_MUSMM4.959e-1430.34Basic leucine zipper and W2 domain-containing prot... [more]
BZW2_MOUSE4.959e-1430.34Basic leucine zipper and W2 domain-containing prot... [more]
BZW2_MACFA4.959e-1430.34Basic leucine zipper and W2 domain-containing prot... [more]
BZW2_HUMAN4.959e-1430.34Basic leucine zipper and W2 domain-containing prot... [more]
BZW1B_DANRE6.476e-1430.00Basic leucine zipper and W2 domain-containing prot... [more]
EXBA_DROME1.105e-1337.80Protein extra bases OS=Drosophila melanogaster GN=... [more]
BZW2_DANRE1.221e-1228.67Basic leucine zipper and W2 domain-containing prot... [more]

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Properties
Property NameValue
Genbank descriptionC32007F02EF RVDevelop1 Citrus clementina cDNA clone C32007F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920381 ID=FC920381; Name=FC920381; organism=Citrus clementina; type=EST; length=547bp
GAGAGCAAATTAGAACGCCACTTCCTCTCTTTTCTCTCATTCCTTCTTTT
TTTCTTAAATTCCCAAAAAGCCCTCACTTGCACAGAGAGTCTCTCCTCTC
TCCGATCCCTCTTCTATTTTGTTTATGAGCTCGAAGGAGAAACCCACTCT
TGGTGGAACGCGGATTAAGCCCCGCAAACGGAATATTGCAGCGCCGCTGG
ACCCTGCAGCTTTTTCGGATGCAGTGGTCCAGATTTATCTGGATAATGCT
GGTGATCTGGAACTTATTGCCAAGTGCATTGAATCTTCTGACCTTAACTT
CTCAAGATACGGTGACACCTTTTTTGAGGTTGTTTTCACAGGAGGCCGTA
CACAACCTGGAACAACAAAACCTGATGAGGGGGAGCGCCACTCTTACTCC
ATAATAGACTGTGAGCCTCAGCGTGAAGCCATTTTACCCTCTGTAATCTA
TATACAGAAGATCCTGAGGCGGAAGCCATTTCTCATAAAGAATCTTCGAA
ATGTTACTCGAAGATTCATGCAGTCATTGGAGCTTTTTGAGGAGAAT
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