FC920382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920382 vs. ExPASy Swiss-Prot
Match: RS6_YEAST (40S ribosomal protein S6 OS=Saccharomyces cerevisiae GN=RPS6A PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.450e-51 Identity = 110/189 (58.20%), Postives = 127/189 (67.20%), Query Frame = 2 Query: 80 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTL 646 MK NI+ P G QK EIDD+ ++R FFDKRI QEV G+A+G+EFKGYVFKI GG DKQGFPMKQGVL P R++LLL + C+ IV PDL+VL LVIVKKGE +L GLTDT P+ GPKRA+ IRK F LSKEDDVR +V R TK K +KAPKIQRLVTP L Sbjct: 1 MKLNISYPVNGSQKTFEIDDEHRIRVFFDKRIGQEVDGEAVGDEFKGYVFKISGGNDKQGFPMKQGVLLPTRIKLLLTKNVSCY--RPRRDGERKRKSVRGAIVGPDLAVLALVIVKKGEQELEGLTDTTVPKRLGPKRANNIRKFFGLSKEDDVRDFV---IRREVTKGEKTYTKAPKIQRLVTPQRL 184
BLAST of FC920382 vs. ExPASy Swiss-Prot
Match: RS6_YARLI (40S ribosomal protein S6 OS=Yarrowia lipolytica GN=RPS6 PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.894e-51 Identity = 108/189 (57.14%), Postives = 132/189 (69.84%), Query Frame = 2 Query: 80 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTL 646 MK NIA P G QK ++I+D+ ++R F++KR+ QEV D LG+EFKGYV KI GG DKQGFPMKQGV+ P RVRLLL + + C+ CIVS DLSVL++VIVK+G+ D+ GLT PR GPKRA+ IRKLF LSKEDDVR+YV RR TTK+GK +KAPKIQRL+TP L Sbjct: 1 MKLNIAYPAQGTQKCIDIEDEHRVRGFYEKRMGQEVEADFLGDEFKGYVLKITGGNDKQGFPMKQGVMHPTRVRLLLSKDSSCY--RSRRAGERKRKSVRGCIVSSDLSVLSVVIVKQGDADIEGLTTETVPRRLGPKRANNIRKLFALSKEDDVRQYV--IRREVTTKSGKTYTKAPKIQRLITPRRL 185
BLAST of FC920382 vs. ExPASy Swiss-Prot
Match: RS6_AEDAL (40S ribosomal protein S6 OS=Aedes albopictus GN=RpS6 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.894e-51 Identity = 109/190 (57.37%), Postives = 131/190 (68.95%), Query Frame = 2 Query: 80 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKV-SKAPKIQRLVTPLTL 646 MK N++ P TG QK E+ DD KLR F+DKR+ E++ D LG+E+KGYVFKI GG DKQGFPMKQGVLT RVRLLL +G C+ CIV +LS L L++VKKGE D+PGLTDT R GPKRAS IRKL+NL+KEDDVR+YV +R K GKK +KAPKIQRL+TP+ L Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCY--RPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYV--VKRPLPEKDGKKPRTKAPKIQRLITPVVL 186
BLAST of FC920382 vs. ExPASy Swiss-Prot
Match: RS6_CAEEL (40S ribosomal protein S6 OS=Caenorhabditis elegans GN=rps-6 PE=1 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.230e-51 Identity = 106/186 (56.99%), Postives = 132/186 (70.97%), Query Frame = 2 Query: 80 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTP 637 M+ N A P TG QK E+D+++KLR FF+KR+SQEV+ DALG+E+KGYV +I GG DKQGFPMKQG+LT GRVRLLL +G C+ CIV ++S L+LVIVKKG+ ++ GLTD+ PR GPKRASKIRKLFNL+K DDV KYV T+ +TF K + APKIQRL+TP Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQGFPMKQGILTNGRVRLLLKKGQSCY--RERKNGERKRKSVRGCIVDANMSALSLVIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDGVTKTI--APKIQRLITP 182
BLAST of FC920382 vs. ExPASy Swiss-Prot
Match: RS6_MANSE (40S ribosomal protein S6 OS=Manduca sexta GN=RpS6 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 5.510e-51 Identity = 108/193 (55.96%), Postives = 131/193 (67.88%), Query Frame = 2 Query: 80 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVS----KAPKIQRLVTPLTL 646 MK N++ P TGCQK E+ D+ KLR F++KR+ EV D LG+E+KGYV ++ GG DKQGFPMKQGVLT RVRLL+ +G C+ CIV +LSVL LVIV+KGE ++PGLTD PR GPKRASKIRKLFNLSKEDDVR+YV + K GK+ + KAPKIQRLVTP+ L Sbjct: 1 MKLNVSFPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCY--RPRRDGERKRKSVRGCIVDANLSVLALVIVRKGEQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV--VKALLPAKEGKENAKPRYKAPKIQRLVTPVVL 189
BLAST of FC920382 vs. ExPASy Swiss-Prot
Match: RS6_CANGA (40S ribosomal protein S6 OS=Candida glabrata GN=RPS6A PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.094e-50 Identity = 106/189 (56.08%), Postives = 128/189 (67.72%), Query Frame = 2 Query: 80 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTL 646 MK NIA P G QK +E+DD+ ++R F+DKRI QE+ G+A+G+EFKGY FKI GG DKQGFPMKQGVL P RV+LLL +G C+ IV PDL+VL+LVIVKKGE +L G+TD P+ GPKRA+ IRK F L+KEDDVR +V R TK K +KAPKIQRLVTP L Sbjct: 1 MKLNIAYPVNGTQKTVEVDDEHRVRVFYDKRIGQEIEGEAVGDEFKGYTFKITGGNDKQGFPMKQGVLLPTRVKLLLAKGHSCY--RPRRSGERKRKSVRGAIVGPDLAVLSLVIVKKGEQELEGVTDATVPKRLGPKRANHIRKFFGLTKEDDVRDFV---IRREVTKGEKTYTKAPKIQRLVTPQRL 184
BLAST of FC920382 vs. ExPASy Swiss-Prot
Match: RS6_KLUMA (40S ribosomal protein S6 OS=Kluyveromyces marxianus GN=RPS6 PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.092e-50 Identity = 106/189 (56.08%), Postives = 129/189 (68.25%), Query Frame = 2 Query: 80 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTL 646 MK NI+ P G QK +EIDD+ ++R F+DKRI QEV G+A+G+EFKGYVFKI GG DKQGFPMKQGVL P RV+LL+ +GT C+ IV PDL+VL LVIVKKG+ ++ G+T+ P+ GPKRA+ IRK F L+KEDDVR YV R TK K +KAPKIQRLVTP L Sbjct: 1 MKLNISYPINGTQKCVEIDDEHRVRVFYDKRIGQEVDGEAVGDEFKGYVFKIAGGNDKQGFPMKQGVLLPTRVKLLMAKGTSCY--RPRRNGERKRKSVRGAIVGPDLAVLALVIVKKGDQEIEGVTNETVPKRLGPKRANNIRKFFGLTKEDDVRDYV---IRREVTKGEKTYTKAPKIQRLVTPQRL 184
BLAST of FC920382 vs. ExPASy Swiss-Prot
Match: RS6_DEBHA (40S ribosomal protein S6 OS=Debaryomyces hansenii GN=RPS6 PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.357e-49 Identity = 102/189 (53.97%), Postives = 130/189 (68.78%), Query Frame = 2 Query: 80 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTL 646 MK NI+ P G QK ++I+D+ KLR F++KR+ QEV GD +G+EFKGY+F+I GG DKQGFPMKQGV+ P RV+LLL +G C+ CIV+ DL+VL L +VK+G+ D+ GLTDT P+ GPKRA+ IRK F L+KEDDVR++V R K KK +KAPKIQRLVTP TL Sbjct: 1 MKLNISYPANGTQKCIDIEDEHKLRVFYEKRMGQEVEGDTVGDEFKGYIFRITGGNDKQGFPMKQGVMHPTRVKLLLAKGHSCY--RPRRTGERKRKSVRGCIVAQDLAVLALSVVKQGDSDIEGLTDTTTPKRLGPKRANNIRKFFGLTKEDDVRQFV---VRREVVKGDKKYTKAPKIQRLVTPQTL 184
BLAST of FC920382 vs. ExPASy Swiss-Prot
Match: RS6_KLULA (40S ribosomal protein S6 OS=Kluyveromyces lactis GN=RPS6 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49 Identity = 104/189 (55.03%), Postives = 127/189 (67.20%), Query Frame = 2 Query: 80 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTL 646 MK NI+ P G QK +EIDD+ ++R F+DKRI QEV G+++G+EFKGYVFKI GG DKQGFPMKQGVL P RV+LLL +G C+ IV PDL+VL L+I KKGE ++ G+T+ P+ GPKRA+ IRK F L+KEDDVR YV R TK K +KAPKIQRLVTP L Sbjct: 1 MKLNISYPINGTQKCIEIDDEHRVRVFYDKRIGQEVDGESVGDEFKGYVFKIAGGNDKQGFPMKQGVLLPTRVKLLLAKGHSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGEQEIEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYV---IRREVTKGDKSYTKAPKIQRLVTPQRL 184
BLAST of FC920382 vs. ExPASy Swiss-Prot
Match: RS6_TOBAC (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 6.735e-49 Identity = 105/144 (72.92%), Postives = 110/144 (76.39%), Query Frame = 2 Query: 215 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTL 646 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCF CIVSPDLSVLNLVIVKKGE+DLPGLTDTEKPRMRGP+ + L+ KEDDVRKYVNT FTTK K SKAPKIQRLVTPLTL Sbjct: 1 KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT-TAEFTTKW--KGSKAPKIQRLVTPLTL 139 The following BLAST results are available for this feature:
BLAST of FC920382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920382 ID=FC920382; Name=FC920382; organism=Citrus clementina; type=EST; length=646bpback to top |