FC920398

Overview
NameFC920398
Unique NameFC920398
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length663
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14268 contig Ccv1_Contig14268:4..666. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_STRP6 (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M6 GN=pgk PE=1 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 2.746e-37
Identity = 89/185 (48.11%), Postives = 121/185 (65.41%), Query Frame = 3
Query:  126 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKY--SLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFH----KEEEKNDPEFAKKLASLAD-LYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYLVGAV 659
            +K+ DLKGK+V VRVD NVPL D + IT+DNR+ AA+PTIKY++  G + IL SHLGR K    K   SL P+   L+  LG +V       G ++E+ +  + +G VLL+EN RF     K+E KND E  K  ASL D ++VNDAFG+AHRAHAS  G++  ++ +VAGFL+  E+ Y+  AV
Sbjct:    6 VKDVDLKGKKVLVRVDFNVPLKDGV-ITNDNRITAALPTIKYIIEQGGRAILFSHLGRVKEEADKEGKSLAPVAADLAAKLGQDVVFPGVTRGSKLEEAINALEDGQVLLVENTRFEDVDGKKESKNDEELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVEKAVAGFLLENEIAYIQEAV 189          
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_STRP3 (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M3 GN=pgk PE=3 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 2.746e-37
Identity = 89/185 (48.11%), Postives = 121/185 (65.41%), Query Frame = 3
Query:  126 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKY--SLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFH----KEEEKNDPEFAKKLASLAD-LYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYLVGAV 659
            +K+ DLKGK+V VRVD NVPL D + IT+DNR+ AA+PTIKY++  G + IL SHLGR K    K   SL P+   L+  LG +V       G ++E+ +  + +G VLL+EN RF     K+E KND E  K  ASL D ++VNDAFG+AHRAHAS  G++  ++ +VAGFL+  E+ Y+  AV
Sbjct:    6 VKDVDLKGKKVLVRVDFNVPLKDGV-ITNDNRITAALPTIKYIIEQGGRAILFSHLGRVKEEADKEGKSLAPVAADLAAKLGQDVVFPGVTRGSKLEEAINALEDGQVLLVENTRFEDVDGKKESKNDEELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVEKAVAGFLLENEIAYIQEAV 189          
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_STRP1 (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M1 GN=pgk PE=3 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.746e-37
Identity = 89/185 (48.11%), Postives = 121/185 (65.41%), Query Frame = 3
Query:  126 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKY--SLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFH----KEEEKNDPEFAKKLASLAD-LYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYLVGAV 659
            +K+ DLKGK+V VRVD NVPL D + IT+DNR+ AA+PTIKY++  G + IL SHLGR K    K   SL P+   L+  LG +V       G ++E+ +  + +G VLL+EN RF     K+E KND E  K  ASL D ++VNDAFG+AHRAHAS  G++  ++ +VAGFL+  E+ Y+  AV
Sbjct:    6 VKDVDLKGKKVLVRVDFNVPLKDGV-ITNDNRITAALPTIKYIIEQGGRAILFSHLGRVKEEADKEGKSLAPVAADLAAKLGQDVVFPGVTRGSKLEEAINALEDGQVLLVENTRFEDVDGKKESKNDEELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVEKAVAGFLLENEIAYIQEAV 189          
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_JANMA (Phosphoglycerate kinase OS=Janthinobacterium sp. (strain Marseille) GN=pgk PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.746e-37
Identity = 85/185 (45.95%), Postives = 119/185 (64.32%), Query Frame = 3
Query:   99 MAAKKSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKG--VTPKYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYL 647
            M  K+   ++   +L+GKRVF+R DLNVP D   NIT+D R+RA+VP I+  +  GA V+++SHLGRP      P  +L P+  RLSELLG  V +  + +         ++  G V+LLEN R +K E+KND   A+K+A+L D+YVNDAFG+AHRA A+T G+AK+   + AG L+  ELD L
Sbjct:    1 MQFKRLSDLIARGELQGKRVFIRADLNVPQDSTGNITEDTRIRASVPAIQQALQAGAAVMVTSHLGRPVEGEFKPADTLAPIAQRLSELLGQPVALKQNWVDG------VDVAPGQVVLLENCRVNKGEKKNDDALAQKIAALCDVYVNDAFGTAHRAEATTHGIAKYAPVACAGPLLAAELDAL 179          
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_DEIGD (Phosphoglycerate kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=pgk PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.746e-37
Identity = 89/179 (49.72%), Postives = 116/179 (64.80%), Query Frame = 3
Query:  117 VSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPK-GVTPKYSLKPLVPRLSELLGVEVK-MANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYL 647
            +  L + D+ GKRV VRVD NVP+ D + + D+ RV A++PT+++L+  GA ++L SHLGRPK G   KYSL+P+   L   LG  VK +A+    EE  + V  +  G V LLENVRF   EEKNDPE  ++LA L D +V DAFGSAHRAHAS  GVA  L P  AG L+  E++ L
Sbjct:    1 MQTLDQLDVNGKRVLVRVDYNVPIKDGV-VQDETRVTASLPTLQHLLARGAALVLLSHLGRPKNGPEEKYSLRPVAAVLERALGRPVKFIASLPSSEETRRAVESLQPGEVALLENVRFEPGEEKNDPELVEQLARLGDAFVLDAFGSAHRAHASVSGVAGRL-PHAAGLLLHNEVEAL 177          
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_BDEBA (Phosphoglycerate kinase OS=Bdellovibrio bacteriovorus GN=pgk PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.746e-37
Identity = 77/180 (42.78%), Postives = 123/180 (68.33%), Query Frame = 3
Query:  111 KSVSVLKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTP-KYSLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYL 647
            K +  +++ +L GK VF+R+DLNVP++ N  ITD+NR+ A++PTIKY M  GAK++++SHLGRPK     ++SL+P+  RL +LL  EV +  +   +  + ++  +    ++LLENVRF + E K+  EFA+K+A+ +D+Y+NDAFG++HRAHA+   +   +K    GFL+ KE+  L
Sbjct:    6 KGIKTVRDFELAGKVVFLRLDLNVPME-NGKITDENRITASLPTIKYCMEQGAKLVMASHLGRPKTKDDTEFSLEPVAKRLQDLLNAEVILVEEPDSDAPKHLLPSLKPHQLILLENVRFEEGETKDSVEFAQKIANYSDIYINDAFGASHRAHATIHALPSVMKDKGIGFLIEKEITML 184          
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_STRPZ (Phosphoglycerate kinase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=pgk PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.587e-37
Identity = 89/185 (48.11%), Postives = 121/185 (65.41%), Query Frame = 3
Query:  126 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKY--SLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFH----KEEEKNDPEFAKKLASLAD-LYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYLVGAV 659
            +K+ DLKGK+V VRVD NVPL D + IT+DNR+ AA+PTIKY++  G + IL SHLGR K    K   SL P+   L+  LG +V       G ++E+ +  + +G VLL+EN RF     K+E KND E  K  ASL D ++VNDAFG+AHRAHAS  G++  ++ +VAGFL+  E+ Y+  AV
Sbjct:    6 VKDVDLKGKKVLVRVDFNVPLKDGV-ITNDNRITAALPTIKYIIEQGGRAILFSHLGRVKEEADKEGKSLAPVAADLAAKLGQDVVFPGVTRGAKLEEAINALEDGQVLLVENTRFEDVDGKKESKNDEELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVEKAVAGFLLENEIAYIQEAV 189          
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_STRP4 (Phosphoglycerate kinase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=pgk PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.587e-37
Identity = 89/185 (48.11%), Postives = 120/185 (64.86%), Query Frame = 3
Query:  126 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKY--SLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFHK----EEEKNDPEFAKKLASLAD-LYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYLVGAV 659
            +K+ DLKGK+V VRVD NVPL D + IT+DNR+ AA+PTIKY++  G + IL SHLGR K    K   SL P+   L+  LG +V       G E+E  +  + +G VLL+EN R+      +E KNDPE  K  ASL D ++VNDAFG+AHRAHAS  G++  ++ +VAGFL+  E+ Y+  AV
Sbjct:    6 VKDVDLKGKKVLVRVDFNVPLKDGV-ITNDNRITAALPTIKYIIEQGGRAILFSHLGRVKEEADKAGKSLAPVAADLAAKLGQDVVFPGVTRGAELEAAINVLEDGQVLLVENTRYEDVDGXKESKNDPELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVEKAVAGFLLENEIAYIQEAV 189          
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_STRA5 (Phosphoglycerate kinase OS=Streptococcus agalactiae serotype V GN=pgk PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.587e-37
Identity = 89/185 (48.11%), Postives = 121/185 (65.41%), Query Frame = 3
Query:  126 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKY--SLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFH----KEEEKNDPEFAKKLASLAD-LYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYLVGAV 659
            +K+ DLKGK+V VRVD NVPL D + IT+DNR+ AA+PTIKY++  G + IL SHLGR K    K   SL P+   L+  LG +V       G ++E+ +  + +G VLL+EN RF     K+E KND E  K  ASL D ++VNDAFG+AHRAHAS  G++  ++ +VAGFL+  E+ Y+  AV
Sbjct:    6 VKDVDLKGKKVLVRVDFNVPLKDGV-ITNDNRITAALPTIKYIIEQGGRAILFSHLGRVKEEADKEGKSLAPVAADLAAKLGQDVVFPGVTRGAKLEEAINALEDGQVLLVENTRFEDVDGKKESKNDEELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVEKAVAGFLLENEIAYIQEAV 189          
BLAST of FC920398 vs. ExPASy Swiss-Prot
Match: PGK_STRA3 (Phosphoglycerate kinase OS=Streptococcus agalactiae serotype III GN=pgk PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.587e-37
Identity = 89/185 (48.11%), Postives = 121/185 (65.41%), Query Frame = 3
Query:  126 LKEADLKGKRVFVRVDLNVPLDDNLNITDDNRVRAAVPTIKYLMGHGAKVILSSHLGRPKGVTPKY--SLKPLVPRLSELLGVEVKMANDCIGEEVEKMVAEIPEGGVLLLENVRFH----KEEEKNDPEFAKKLASLAD-LYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMXKELDYLVGAV 659
            +K+ DLKGK+V VRVD NVPL D + IT+DNR+ AA+PTIKY++  G + IL SHLGR K    K   SL P+   L+  LG +V       G ++E+ +  + +G VLL+EN RF     K+E KND E  K  ASL D ++VNDAFG+AHRAHAS  G++  ++ +VAGFL+  E+ Y+  AV
Sbjct:    6 VKDVDLKGKKVLVRVDFNVPLKDGV-ITNDNRITAALPTIKYIIEQGGRAILFSHLGRVKEEADKEGKSLAPVAADLAAKLGQDVVFPGVTRGAKLEEAINALEDGQVLLVENTRFEDVDGKKESKNDEELGKYWASLGDGIFVNDAFGTAHRAHASNVGISANVEKAVAGFLLENEIAYIQEAV 189          
The following BLAST results are available for this feature:
BLAST of FC920398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGK_STRP62.746e-3748.11Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_STRP32.746e-3748.11Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_STRP12.746e-3748.11Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_JANMA2.746e-3745.95Phosphoglycerate kinase OS=Janthinobacterium sp. (... [more]
PGK_DEIGD2.746e-3749.72Phosphoglycerate kinase OS=Deinococcus geothermali... [more]
PGK_BDEBA2.746e-3742.78Phosphoglycerate kinase OS=Bdellovibrio bacteriovo... [more]
PGK_STRPZ3.587e-3748.11Phosphoglycerate kinase OS=Streptococcus pyogenes ... [more]
PGK_STRP43.587e-3748.11Phosphoglycerate kinase OS=Streptococcus pneumonia... [more]
PGK_STRA53.587e-3748.11Phosphoglycerate kinase OS=Streptococcus agalactia... [more]
PGK_STRA33.587e-3748.11Phosphoglycerate kinase OS=Streptococcus agalactia... [more]

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Properties
Property NameValue
Genbank descriptionC32007G09EF RVDevelop1 Citrus clementina cDNA clone C32007G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920398 ID=FC920398; Name=FC920398; organism=Citrus clementina; type=EST; length=663bp
GATTTTCTCACTTAGCGTTCACCAATCTTCGATCTCATTCCAAAATCTAA
CCAAAACCCCTTCTCGATTTCTCCGATCTCGTGTTTGATCGAATCAAAAT
GGCCGCCAAGAAGAGTGTAAGCGTTCTAAAAGAAGCTGATTTGAAGGGAA
AGAGAGTGTTCGTACGAGTGGATCTGAACGTGCCGTTGGATGACAACTTG
AATATCACCGATGACAACAGAGTCCGTGCTGCTGTTCCCACTATCAAATA
CCTGATGGGTCATGGCGCCAAAGTCATTCTCTCCAGTCACTTGGGGCGTC
CAAAGGGTGTTACACCCAAGTACAGCTTGAAACCTCTTGTGCCAAGGCTT
TCTGAACTTCTTGGAGTTGAGGTTAAAATGGCAAACGACTGCATTGGTGA
AGAAGTTGAAAAAATGGTGGCTGAAATTCCCGAAGGGGGCGTCTTGCTCC
TCGAAAATGTGAGGTTCCATAAGGAGGAAGAGAAGAATGACCCAGAGTTT
GCTAAGAAGCTAGCTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGG
ATCTGCCCATAGAGCCCATGCTTCCACTGAGGGTGTGGCTAAGTTCTTGA
AGCCTTCTGTGGCTGGTTTCCTTATGNCAAAGGAACTAGATTATCTTGTT
GGAGCTGTTTCAA
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