FC920404

Overview
NameFC920404
Unique NameFC920404
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig398 contig Ccv1_Contig398:366..1065. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.138e-30
Identity = 84/223 (37.67%), Postives = 116/223 (52.02%), Query Frame = 1
Query:    1 VTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV-TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV----GLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEE 648
            V+LLG C E     LVYEY+ NG+L+D +  K    PL +  R RIA   A G+ +LH+     I H D+K  NILLDS  ++K+ DFG+ RL    D   +   H ST  KG+  Y DPEY  T  LT KSD YS G+++L+L TG  P+     +  E+  A   G + S +D      P     +   L L+CC    RE  D  PS+ + + +L +  E
Sbjct:  682 VSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLK-EPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQPITHGKNIVREINIAYESGSILSTVDKRMSSVPDECLEKFATLALRCC----REETDARPSMAEVVRELEIIWE 899          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30
Identity = 83/226 (36.73%), Postives = 122/226 (53.98%), Query Frame = 1
Query:    4 TLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV---------GLAGEVRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAE 645
            + +G C +  S  L+YEY+ NG+LQD L    N   L W+ R  IA + A GL +LH      IVH D+K  NILL+  L +KI DFG+ ++  ED L     H  TA  G+  Y DPEY+ T  L  KSD YSFG+++L+L+TG+  +          +   V   +  G +  ++DP L GD+ +  A + V++ + C    G  RP+ T  +V +L+Q   AE
Sbjct:  638 SFVGYCDDGRSMALIYEYMANGNLQDYL-SSENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDL----SHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDRGTNRPN-TNQIVSDLKQCLAAE 857          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30
Identity = 88/230 (38.26%), Postives = 129/230 (56.09%), Query Frame = 1
Query:    1 VTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNV-SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR------LPVGLAGEVRRA----VSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEE 648
            V L+G C E     LVYE++  GSL++ LFR+     PL W  R R+A   A GL FLH+++P+ +++ D K  NILLDS  ++K+ DFG+ R    D     + H ST   G+  YA PEY  TG L+ KSD YSFG+++L+LL+GR       PVG    V  A     +  +L  ++DP L G +    A ++  L L C  +  + RP +   +VK +E+LH+ +E
Sbjct:  135 VKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQPQ-VIYRDFKASNILLDSNYNAKLSDFGLAR----DGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMN-EIVKTMEELHIQKE 358          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.124e-30
Identity = 86/210 (40.95%), Postives = 114/210 (54.29%), Query Frame = 1
Query:    1 VTLLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR------LP---VGLAGEVRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERP 594
            V+L+G C E     LVYE++ NG  +D L+ K N++PL WK R  I    A GL +LH+   + I+H D+K  NILLD  L +K+ DFG+ + V          H STA KGSF Y DPEY R   LT KSD YSFG+++L+ L  R      LP   V LA    +    G L  I+DP LAG       ++  +   +C E YG +RP
Sbjct:  583 VSLIGYCDENSEMILVYEFMSNGPFRDHLYGK-NLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVA-----FGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMQWKRKGLLEKIIDPHLAGTINPESMKKFAEAAEKCLEDYGVDRP 786          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.124e-30
Identity = 77/211 (36.49%), Postives = 122/211 (57.82%), Query Frame = 1
Query:    1 VTLLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC-------GKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDIT 603
            V+L+G C +    +L+YE +  G+L++ L  K   S L W  R +IA E A G+ +LH+    KIVH D+K  NILL  E  +KI DFG+ R     +  + +  + T   G+F Y DPEYH+T +L+ KSD YSFG+++L++++G+  + L+ E    V         G + SI+DP L  D+ T  A ++V+L + C     +ERP+++
Sbjct:  616 VSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSR-----SFLIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSRENCNIVEWTSFILENGDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRTSKERPNMS 821          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.386e-29
Identity = 88/229 (38.43%), Postives = 124/229 (54.15%), Query Frame = 1
Query:    1 VTLLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVS--PLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR------LPVGLAGEVRRAVS---CGKLSSILD-PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE---QLH 636
            V+L+G C E     LVYEY+P+G+L+D LFR+   S  PL WK R  I    A GL +LH+     I+H D+K  NILLD    +K+ DFG+ R+           H ST  KG+F Y DPEY+R  VLT KSD YSFG+++L++L  R      +P   A  +R   S    G +  I+D  L+ D  +    +  ++ ++C +  G ERP +   +V  LE   QLH
Sbjct:  576 VSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSA---SQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNYRRGTVDQIIDSDLSADITSTSLEKFCEIAVRCVQDRGMERPPMN-DVVWALEFALQLH 800          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.810e-29
Identity = 83/230 (36.09%), Postives = 121/230 (52.61%), Query Frame = 1
Query:    1 VTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL-VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTG---------RLPVGLAGEVRRAVSCGKLSSILDPL----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVA 642
            V LLG C E     LVYEY+PNG+L + L R    S L W  R  +A + A  + +LHSS    I H D+K  NILLD + +SK+ DFG+ RL +TE      S H STAP+G+  Y DP+YH+   L+ KSD YSFG+++ +++TG            + LA      +  G +  I+DP+       W       + +L  +C   +   RP +T  +  ELEQ+ ++
Sbjct:  405 VRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRG-SGLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLGMTE------SSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITGLKVVDFTRPHTEINLAALAVDKIGSGCIDEIIDPILDLDLDAWTLSSIHTVAELAFRCLAFHSDMRPTMT-EVADELEQIRLS 626          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.364e-29
Identity = 84/222 (37.84%), Postives = 127/222 (57.21%), Query Frame = 1
Query:    1 VTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR--LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE-------VRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 630
            V+L+G C E    +L+YEY+ NG L+  L  K     L W++R  IA E A GL +LHS     +VH D+K  NILLD    +K+ DFG+ R   V E++      H ST   G+  Y DPEY+RT  LT KSD YSFG+++L+++T +  +  A E       VR  ++   +S+I+DP L G++ +   R+ + L + C +     RPD++  +V+EL+Q
Sbjct:  630 VSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHGDCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEES------HVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQANENRHIAERVRTMLTRSDISTIVDPNLIGEYDSGSVRKALKLAMSCVDPSPVARPDMS-HVVQELKQ 844          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.364e-29
Identity = 80/225 (35.56%), Postives = 127/225 (56.44%), Query Frame = 1
Query:    1 VTLLGACPEAWSLV--YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE-------VRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAE 645
            VTL+G C E   LV  YEY+ NG+L+  L  +++ SPL W++R RIAAE A GL +LH      ++H D+K  NILLD+   +K+ DFG+ R     +      H ST   GS  Y DPEY+RT  LT KSD +SFG+++L+++T +  +    E       V   ++ G + +I+DP + GD+ +    + ++L + C       RP+++  +  EL++  + E
Sbjct:  648 VTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGS----ETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMS-QVANELQECLLTE 867          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.087e-29
Identity = 86/210 (40.95%), Postives = 111/210 (52.86%), Query Frame = 1
Query:    1 VTLLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR------LP---VGLAGEVRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERP 594
            V+L+G C E     LVYEY+ NG  +D L+ K N+SPL WK R  I    A GL +LH+   + I+H D+K  NILLD  L +K+ DFG+ + V          H STA KGSF Y DPEY R   LT KSD YSFG+++L+ L  R      LP   V LA         G L  I+DP L G       ++  +   +C   YG +RP
Sbjct:  582 VSLIGYCDENAEMILVYEYMSNGPFRDHLYGK-NLSPLTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVA-----FGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMLWKQKGLLEKIIDPHLVGAVNPESMKKFAEAAEKCLADYGVDRP 785          
The following BLAST results are available for this feature:
BLAST of FC920404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
Y1684_ARATH2.138e-3037.67Probable LRR receptor-like serine/threonine-protei... [more]
Y4291_ARATH6.221e-3036.73Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH6.221e-3038.26Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y4391_ARATH8.124e-3040.95Probable receptor-like protein kinase At4g39110 OS... [more]
Y1755_ARATH8.124e-3036.49Probable LRR receptor-like serine/threonine-protei... [more]
Y5900_ARATH1.386e-2938.43Putative receptor-like protein kinase At5g39000 OS... [more]
WAKLO_ARATH1.810e-2936.09Wall-associated receptor kinase-like 14 OS=Arabido... [more]
Y5169_ARATH2.364e-2937.84Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH2.364e-2935.56Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH3.087e-2940.95Probable receptor-like protein kinase At2g21480 OS... [more]

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Properties
Property NameValue
Genbank descriptionC32007H03EF RVDevelop1 Citrus clementina cDNA clone C32007H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920404 ID=FC920404; Name=FC920404; organism=Citrus clementina; type=EST; length=700bp
GTGACTCTGCTTGGCGCATGCCCAGAAGCCTGGTCCCTTGTATATGAGTA
TTTGCCCAATGGTAGTCTCCAAGACCGTCTTTTCCGTAAAAGCAACGTTT
CTCCCTTGTTATGGAAGGATCGAGCTCGGATTGCAGCTGAAATAGCTAGC
GGCCTTTGCTTTTTGCACTCATCCAAACCTGAAAAGATTGTCCATGGTGA
TTTGAAACCACAAAACATTCTTCTAGACTCTGAACTCAGCAGCAAGATAT
GCGATTTTGGCATCTGCCGGCTGGTAACCGAGGACACCCTTTATTTGCCC
AGTTTTCATCGGAGCACTGCGCCAAAGGGTTCTTTTCCATATGCAGATCC
AGAGTACCACAGGACTGGAGTCCTAACTCCCAAGTCCGACAGTTACTCCT
TTGGGTTGATAATCCTACAGCTACTTACTGGAAGGCTGCCAGTTGGGTTA
GCAGGTGAAGTGCGAAGAGCTGTGTCATGCGGGAAGTTATCATCCATCTT
GGATCCATTAGCTGGAGATTGGCCTACGTTTGTTGCAAGGCGTTTAGTGG
ACCTGGGATTGCAATGCTGTGAATTGTACGGTAGGGAGCGACCCGATATC
ACACCATCTCTGGTAAAGGAATTGGAACAGCTGCATGTTGCAGAGGAACG
ACCAGTTCCATCATTCTTTTTGTGCCCCATTCTTCAGGAAATAATGCATG
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