FC920404

Overview
NameFC920404
Unique NameFC920404
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig398 contig Ccv1_Contig398:366..1065. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.173e-28
Identity = 80/228 (35.09%), Postives = 117/228 (51.32%), Query Frame = 1
Query:    1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV---------GLAGEVRRAVSCGKLSSILDPLAGDWPTF-VARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEE 648
            V L+G C   E   LVYE++PNG L  RL   S+   + W  R RI+ EIA  L +LHS+    + H D+K  NILLD +  +K+ DFG  R +  D       H +T   G+F Y DPEY +T   T KSD YSFG+++++L+TG  P          GL      A+   ++  I+D    +  T      +  L  +C  L G++RP++    V ELE++  + E
Sbjct:  478 VKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVD-----QTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENRGLVSHFNEAMKQNRVLDIVDSRIKEGCTLEQVLAVAKLARRCLSLKGKKRPNMREVSV-ELERIRSSPE 699          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.001e-28
Identity = 80/220 (36.36%), Postives = 120/220 (54.55%), Query Frame = 1
Query:    1 VTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE-------VRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 630
            V L+G C +    +L+YEY+ NG L++ +  K   + L W++R +IA E A GL +LH+     +VH D+K  NILL+    +K+ DFG+ R    D       H ST   G+  Y DPEY+RT  L+ KSD YSFG+++L+++T +       E       V   ++ G + SILDP L GD+ T  A ++V+L L C       RP +   +V EL +
Sbjct:  622 VGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVD----GESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTRERTHINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMA-HVVTELNE 836          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.001e-28
Identity = 81/225 (36.00%), Postives = 116/225 (51.56%), Query Frame = 1
Query:    1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR---------LPVGLAGEVRRAVSCGKLSSILD-PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 639
            V +LG C   E   LVYE++ +G+L D L      S L W+ R RIA E+A  L +LHSS    I+H D+K  NILLD  L++K+ DFG  RL+  D   L     +T  +G+  Y DPEY+ TG+L  KSD YSFG+++++LL+G+          P  L      A    +   I+D  +  +      +    +  +C  L G ERP +   +  ELE L V
Sbjct:  461 VKVLGCCLETEVPLLVYEFINSGTLFDHLHGSLYDSSLTWEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQL-----TTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPHCPKNLVSCFASATKNNRFHEIIDGQVMNEDNQREIQEAARIAAECTRLMGEERPRM-KEVAAELEALRV 679          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.001e-28
Identity = 82/231 (35.50%), Postives = 124/231 (53.68%), Query Frame = 1
Query:    1 VTLLGAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP---VGLAGEVRRAV----SCGKLSSILDPLAGD-WPTFVARRLVDLGLQCCELYGRERP--DITPSLVKELEQLHVAEERP 654
            V LLG     PE+  LVYEY+ N SL D LF + +V PL W  R +I    A G+ +LH     +I+H D+K  NILL+ + + +I DFG+ RL  ED       H STA  G+  Y  PEY   G LT K+D YSFG+++++++TG+     V  AG + ++V        +   +DP+ GD +    A RL+ +GL C +    +RP   +   ++K   ++H   + P
Sbjct:  380 VKLLGCSITGPESL-LVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPED-----KTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSILQSVWSLYRTSNVEEAVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMKGSLEIHTPTQPP 604          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.613e-28
Identity = 83/228 (36.40%), Postives = 118/228 (51.75%), Query Frame = 1
Query:    1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV---------GLAGEVRRAVSCGKLSSILDPLAGDWPTF-VARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEE 648
            V LLG C   E   LVYEY+PNG L  RL  +S+   + W+ R RIA EIA  L ++HS+    I H D+K  NILLD +  +K+ DFG  R VT     L   H +T   G+F Y DPEY  +   T KSD YSFG+++++L+TG  P+         GLA     A+   ++  I+D    D         +  L  +C    G+ RP++   +  ELE++  + E
Sbjct:  486 VKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVT-----LDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNM-KEVSNELERIRSSPE 707          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.613e-28
Identity = 81/229 (35.37%), Postives = 121/229 (52.84%), Query Frame = 1
Query:    1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV---------GLAGEVRRAVSCGKLSSILD-PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEER 651
            V LLG C   E   LVYE++ +G+L D L      S L W+ R R+A EIA  L +LHSS    I+H D+K  NILLD  L++K+ DFG  RL+  D   L     +T  +G+  Y DPEY+ TG+L  KSD YSFG+++++LL+G+  +          +      A    +L  I+D  +  +      ++   + ++C  L G ERP +   +  ELE L V + +
Sbjct:  467 VKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDL-----ATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTSKHIVSYFASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERPGM-KEVAAELEALRVTKTK 689          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.613e-28
Identity = 83/227 (36.56%), Postives = 128/227 (56.39%), Query Frame = 1
Query:    1 VTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL--VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-------GRLPVGLAGEVRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAE 645
            V+L+G C E    +L+YE+LP G L+  L  KS  S + W +R RIA E A GL +LHS     IVH D+K  NILLD +L +K+ DFG+ R   +  +T      H ST   G+  Y DPEY++T  L  KSD YSFG+++L+++T        R    ++  V   ++ G ++ I+DP L GD+ +    R+++L + C       RP+++  +  EL++  V+E
Sbjct:  636 VSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGGSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGET------HISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSRSKSHISQWVGFELTRGDITKIMDPNLNGDYESRSVWRVLELAMSCANPSSVNRPNMS-QVANELKECLVSE 855          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.613e-28
Identity = 90/225 (40.00%), Postives = 122/225 (54.22%), Query Frame = 1
Query:    1 VTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL-VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV--GLAGEVRRAVSCG--------KLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 633
            V L+G C E  +  LVYE++P GSL++ LFR+    PL W  R ++A   A GL FLH +K + +++ D K  NILLD+E +SK+ DFG+ +   T D       H ST   G+  YA PEY  TG LT KSD YSFG+++L+LL+GR  V     G  +  V           KL  I+D  L G +P   A     L LQC     + RP ++  L K L+QL
Sbjct:  150 VKLVGYCVEGENRLLVYEFMPKGSLENHLFRRG-AQPLTWAIRMKVAIGAAKGLTFLHDAKSQ-VIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKT-----HVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAK-LDQL 366          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.413e-28
Identity = 85/229 (37.12%), Postives = 122/229 (53.28%), Query Frame = 1
Query:    1 VTLLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVS--PLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR------LPVGLAGEVRRAVS---CGKLSSILD-PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE---QLH 636
            V+L+G C +     LVYEY+P+G+L+D LFR+   S  PL WK R  I    A GL +LH+     I+H D+K  NILLD    +K+ DFG+ R+           H ST  KG+F Y DPEY+R  +LT KSD YSFG+++L++L  R      +P   A  +R   S      +  I+D  L  D  +    +  ++ ++C +  G ERP +   +V  LE   QLH
Sbjct:  583 VSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSA---SQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNFNKRTVDQIIDSDLTADITSTSMEKFCEIAIRCVQDRGMERPPMN-DVVWALEFALQLH 807          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.458e-28
Identity = 84/215 (39.07%), Postives = 109/215 (50.70%), Query Frame = 1
Query:    1 VTLLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSP-----LLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR------LP---VGLAGEVRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERP 594
            V+L+G C E     LVYEY+ NG L+D L+      P     L WK R  I    A GL +LH+   + I+H D+K  NILLD  L +K+ DFG+ +    D       H STA KGSF Y DPEY R   LT KSD YSFG+++ ++L  R      LP   V LA         G L  I+DP + G       R+ V+   +C   YG +RP
Sbjct:  582 VSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMD-----EGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAEYAMNLHRKGMLEKIIDPKIVGTISKGSLRKFVEAAEKCLAEYGVDRP 791          
The following BLAST results are available for this feature:
BLAST of FC920404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
WAKLI_ARATH1.173e-2835.09Wall-associated receptor kinase-like 22 OS=Arabido... [more]
Y5188_ARATH2.001e-2836.36Probable LRR receptor-like serine/threonine-protei... [more]
WAK2_ARATH2.001e-2836.00Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
CRK3_ARATH2.001e-2835.50Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
WAKLA_ARATH2.613e-2836.40Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
WAK4_ARATH2.613e-2835.37Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
PAM74_ARATH2.613e-2836.56Probable LRR receptor-like serine/threonine-protei... [more]
APK2B_ARATH2.613e-2840.00Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y5389_ARATH3.413e-2837.12Probable receptor-like protein kinase At5g38990 OS... [more]
Y5613_ARATH4.458e-2839.07Probable receptor-like protein kinase At5g61350 OS... [more]

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Properties
Property NameValue
Genbank descriptionC32007H03EF RVDevelop1 Citrus clementina cDNA clone C32007H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920404 ID=FC920404; Name=FC920404; organism=Citrus clementina; type=EST; length=700bp
GTGACTCTGCTTGGCGCATGCCCAGAAGCCTGGTCCCTTGTATATGAGTA
TTTGCCCAATGGTAGTCTCCAAGACCGTCTTTTCCGTAAAAGCAACGTTT
CTCCCTTGTTATGGAAGGATCGAGCTCGGATTGCAGCTGAAATAGCTAGC
GGCCTTTGCTTTTTGCACTCATCCAAACCTGAAAAGATTGTCCATGGTGA
TTTGAAACCACAAAACATTCTTCTAGACTCTGAACTCAGCAGCAAGATAT
GCGATTTTGGCATCTGCCGGCTGGTAACCGAGGACACCCTTTATTTGCCC
AGTTTTCATCGGAGCACTGCGCCAAAGGGTTCTTTTCCATATGCAGATCC
AGAGTACCACAGGACTGGAGTCCTAACTCCCAAGTCCGACAGTTACTCCT
TTGGGTTGATAATCCTACAGCTACTTACTGGAAGGCTGCCAGTTGGGTTA
GCAGGTGAAGTGCGAAGAGCTGTGTCATGCGGGAAGTTATCATCCATCTT
GGATCCATTAGCTGGAGATTGGCCTACGTTTGTTGCAAGGCGTTTAGTGG
ACCTGGGATTGCAATGCTGTGAATTGTACGGTAGGGAGCGACCCGATATC
ACACCATCTCTGGTAAAGGAATTGGAACAGCTGCATGTTGCAGAGGAACG
ACCAGTTCCATCATTCTTTTTGTGCCCCATTCTTCAGGAAATAATGCATG
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