FC920404

Overview
NameFC920404
Unique NameFC920404
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig398 contig Ccv1_Contig398:366..1065. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27
Identity = 79/231 (34.20%), Postives = 127/231 (54.98%), Query Frame = 1
Query:    1 VTLLGACPEAW--SLVYEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV---------GLAGEVRRAVSCGKLSSILDPLAGDWPTFVA-RRLVDLGLQCCELYGRERPDITPSL-VKELEQLHVAEER 651
            V LLG C E     LVY+++ NG+L+  +     +VSPL W  R  I   +A GL +LH     K+VH D+K  NILLD + ++K+ DFG+ +L+  ++ Y+     +T   G+F Y  PEY  TG+L  KSD YSFG++I++++TGR PV          L   ++  V   +   ++DP   + P+  A +R++ + L+C +    +RP +   + + E E L   +ER
Sbjct:  211 VRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYV-----TTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLEAEDLLYRDER 436          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27
Identity = 82/230 (35.65%), Postives = 121/230 (52.61%), Query Frame = 1
Query:    1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV----------GLAGEVRRAVSCGKLSSILDPLAGDW--PTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEE 648
            V LLG C   E  +LVYE++PNG+L   +  +S+     W  R RIA +IA  L +LHS+    I H D+K  NILLD +  +K+ DFG  R VT D       H +T   G+  Y DPEY+ +   T KSD YSFG+++++L+TG  PV          GLA   R A+   +   I+D    D   P  V   + +L  +C    G++RP +   +  +LE++  ++E
Sbjct:  508 VKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTID-----HTHWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPVITVSNSQEIRGLADHFRVAMKENRFFEIMDARIRDGCKPEQV-MAVANLARRCLNSKGKKRPCMR-KVFTDLEKILASQE 730          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27
Identity = 82/231 (35.50%), Postives = 114/231 (49.35%), Query Frame = 1
Query:    1 VTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTG---------RLPVGLAGEVRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPV 657
            V+L+G C E     LVYEY+  G L+  L+  +N  PL WK R  +    A GL +LH+   + I+H D+K  NILLD+   +K+ DFG+ R        +   H ST  KGSF Y DPEY R   LT KSD YSFG+++ ++L           R  V LA         G L  I+DP +A +      ++  +   +CC  YG +RP I   L      L + E  P+
Sbjct:  546 VSLVGYCEEQSEMILVYEYMDKGPLKSHLYGSTN-PPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSR----SGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPLLVREQVNLAEWAIEWQRKGMLDQIVDPNIADEIKPCSLKKFAETAEKCCADYGVDRPTIGDVLWNLEHVLQLQESGPL 771          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.212e-27
Identity = 83/230 (36.09%), Postives = 121/230 (52.61%), Query Frame = 1
Query:    1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV----------GLAGEVRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEE 648
            V LLG C   E   LVYE++ NG+L   +  + ++   ++W  R RIA +IA  L +LHS+    I H D+K  NILLD +  +K+ DFG  R VT D       H +T   G+  Y DPEY+R+   T KSD YSFG+I+ +L+TG  PV           LA   R A+   +LS I+D  +  D        + +L ++C    GR RP++   +  ELE++  + E
Sbjct:  501 VKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTID-----QTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIIALAEHFRVAMKERRLSDIMDARIRDDSKPEQVMAVANLAMKCLSSRGRNRPNMR-EVFTELERICTSPE 724          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.212e-27
Identity = 80/229 (34.93%), Postives = 119/229 (51.97%), Query Frame = 1
Query:    1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV---------GLAGEVRRAVSCGKLSSIL-DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEER 651
            V +LG C   E   LVYE++ NG+L D L      S L W+ R RIA E+A  L +LHSS    I+H D+K  NILLD  L++K+ DFG  +L+  D   L     +T  +G+  Y DPEY+ TG+L  KSD YSFG+++++LL+G+  +          L      A    +L  I+ D +  +      +    +  +C  L G ERP +   +  +LE L V + +
Sbjct:  472 VKILGCCLETEVPLLVYEFITNGTLFDHLHGSIFDSSLTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQL-----TTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQASKHLVSYFVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECTRLMGEERPRM-KEVAAKLEALRVEKTK 694          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.890e-27
Identity = 77/213 (36.15%), Postives = 112/213 (52.58%), Query Frame = 1
Query:    1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV----------GLAGEVRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDI 600
            V LLG C   E   LVYE++PNG+L   L  + +    LW  R RIA +I+    +LH++    I H D+K  NILLD +  +K+ DFG  R V+ D       H +T   G+  Y DPEY+ +   T KSD YSFG+++++L+TG  PV          GLA   R A+   +L  I+D  +  D        + +L L+C +  G+ RPD+
Sbjct:  511 VKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSID-----HTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVITLSETQEITGLADYFRLAMRENRLFEIIDARIRNDCKLEQVIAVANLALRCLKKTGKTRPDM 718          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.890e-27
Identity = 80/228 (35.09%), Postives = 120/228 (52.63%), Query Frame = 1
Query:    1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV---------GLAGEVRRAVSCGKLSSILD-PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEE 648
            V L+G C   E   LVYEY+PNG +  RL  +S+   + W+ R RIA EIA  L ++HS+    I H D+K  NILLD +  +K+ DFG  R VT D       H +T   G+F Y DPEY  +   T KSD YSFG+++++L+TG  P+         GLA     A+   ++  I+D  +  +        +  L  +C    G +RP++  + + ELE++  + E
Sbjct:  489 VKLIGCCLETEVPILVYEYIPNGDMFKRLHDESDDYAMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTID-----QTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKENRVIDIIDIRIKEESKLDQLMAVAKLARKCLSRKGIKRPNMREASL-ELERIRSSPE 710          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.774e-27
Identity = 74/218 (33.94%), Postives = 113/218 (51.83%), Query Frame = 1
Query:    1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFR-KSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE---------VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 618
            V+  G C  P+   LVYEYL  GSL D L+  +S    L W  R ++A + A GL +LH+    +I+H D+K  NILLD ++++K+ DFG+ +  T+      + H +T  KG+  Y DPEY+ T  LT KSD YSFG+++L+L+ GR P+  +G           R  +  G    + D L   +     ++   + ++C       RP I   L K
Sbjct:  663 VSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTK----ADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNLQAGAFEIVDDILKETFDPASMKKAASIAIRCVGRDASGRPSIAEVLTK 876          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.774e-27
Identity = 77/228 (33.77%), Postives = 121/228 (53.07%), Query Frame = 1
Query:    1 VTLLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV---------GLAGEVRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAE 645
            V LLG C E     LVY ++ NGSL DRL+ +     +L W  R  IA   A GL +LH+     ++H D+K  NILLD  + +K+ DFG  +   ++       + S   +G+  Y DPEY++T  L+ KSD +SFG+++L++++GR P+          L    +  +   K+  I+DP + G +      R+V++ LQC E Y   RP +   +V+ELE   + E
Sbjct:  652 VPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQE----GDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMV-DIVRELEDALIIE 874          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.929e-27
Identity = 78/220 (35.45%), Postives = 120/220 (54.55%), Query Frame = 1
Query:    1 VTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE-------VRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 630
            V L+G C +    +L+YEY+  G L++ +  K +V+ L W+ R +IA E A GL +LH+     +VH D+KP NILL+    +K+ DFG+ R    D       H  T   G+  Y DPEY+RT  L+ KSD YSFG+++L+++T +  +    E       V   ++ G + SI+DP L  D+ T    ++V+L L C       RP + P +V EL +
Sbjct:  626 VGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVD----GESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKNRERPHINEWVMFMLTNGDIKSIVDPKLNEDYDTNGVWKVVELALACVNPSSSRRPTM-PHVVMELNE 840          
The following BLAST results are available for this feature:
BLAST of FC920404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
Y1154_ARATH1.297e-2734.20Probable serine/threonine-protein kinase At1g01540... [more]
WAKLK_ARATH1.297e-2735.65Putative wall-associated receptor kinase-like 11 O... [more]
Y5241_ARATH1.694e-2735.50Probable receptor-like protein kinase At5g24010 OS... [more]
WAKLM_ARATH2.212e-2736.09Wall-associated receptor kinase-like 17 OS=Arabido... [more]
WAK3_ARATH2.212e-2734.93Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
WAKLL_ARATH2.890e-2736.15Putative wall-associated receptor kinase-like 13 O... [more]
WAKLE_ARATH2.890e-2735.09Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
Y5487_ARATH3.774e-2733.94Probable LRR receptor-like serine/threonine-protei... [more]
NORK_PEA3.774e-2733.77Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y5189_ARATH4.929e-2735.45Probable LRR receptor-like protein kinase At1g5189... [more]

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Properties
Property NameValue
Genbank descriptionC32007H03EF RVDevelop1 Citrus clementina cDNA clone C32007H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920404 ID=FC920404; Name=FC920404; organism=Citrus clementina; type=EST; length=700bp
GTGACTCTGCTTGGCGCATGCCCAGAAGCCTGGTCCCTTGTATATGAGTA
TTTGCCCAATGGTAGTCTCCAAGACCGTCTTTTCCGTAAAAGCAACGTTT
CTCCCTTGTTATGGAAGGATCGAGCTCGGATTGCAGCTGAAATAGCTAGC
GGCCTTTGCTTTTTGCACTCATCCAAACCTGAAAAGATTGTCCATGGTGA
TTTGAAACCACAAAACATTCTTCTAGACTCTGAACTCAGCAGCAAGATAT
GCGATTTTGGCATCTGCCGGCTGGTAACCGAGGACACCCTTTATTTGCCC
AGTTTTCATCGGAGCACTGCGCCAAAGGGTTCTTTTCCATATGCAGATCC
AGAGTACCACAGGACTGGAGTCCTAACTCCCAAGTCCGACAGTTACTCCT
TTGGGTTGATAATCCTACAGCTACTTACTGGAAGGCTGCCAGTTGGGTTA
GCAGGTGAAGTGCGAAGAGCTGTGTCATGCGGGAAGTTATCATCCATCTT
GGATCCATTAGCTGGAGATTGGCCTACGTTTGTTGCAAGGCGTTTAGTGG
ACCTGGGATTGCAATGCTGTGAATTGTACGGTAGGGAGCGACCCGATATC
ACACCATCTCTGGTAAAGGAATTGGAACAGCTGCATGTTGCAGAGGAACG
ACCAGTTCCATCATTCTTTTTGTGCCCCATTCTTCAGGAAATAATGCATG
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