FC920404

Overview
NameFC920404
Unique NameFC920404
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig398 contig Ccv1_Contig398:366..1065. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26
Identity = 81/223 (36.32%), Postives = 113/223 (50.67%), Query Frame = 1
Query:    1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV---------GLAGEVRRAVSCGKLSSILDPLAGDWPTF-VARRLVDLGLQCCELYGRERPDITPSLVKELEQL 633
            V LLG C   E   LVYE++PNG L  RL  + +   + W+ R  IA EIA  L +LHS+    I H D+K  NILLD +   K+ DFG  R VT D       H +T   G+F Y DPEY ++   T KSD YSFG+++++L+TG+ P          G A     AV   +   I+D    D         +  L  +C    G++RP++    V ELE++
Sbjct:  481 VKLLGCCLETEVPVLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTID-----QTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKENRFLDIVDERIKDECNLDQVMAVAKLAKRCLNRKGKKRPNMREVSV-ELERI 697          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26
Identity = 79/225 (35.11%), Postives = 119/225 (52.89%), Query Frame = 1
Query:    1 VTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLL-WKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG----------LAGEVRRAVSCGKLSSILDPLAGDWPTFVAR-RLVDLGLQCCELYGRERPDITPSLVKELEQL 633
            V+LLG C   E   LVYEY+ NGSL   L  ++ +  +L W  R +IA   A GL FLH      I+H D+K  NILLD +   K+ DFG+ RL++         H ST   G+F Y  PEY ++   T K D YSFG+I+L+L+TG+ P G          L G   + ++ GK   ++DPL        ++ RL+ + + C      +RP++   ++K L+++
Sbjct:  974 VSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLIS-----ACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNML-DVLKALKEI 1192          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26
Identity = 65/149 (43.62%), Postives = 89/149 (59.73%), Query Frame = 1
Query:    1 VTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSN--VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR 435
            VTLLG C +     LVYEY+P G+L   LF  S   + PLLWK R  +A ++A G+ +LH    +  +H DLKP NILL  ++ +K+ DFG+ RL  E    +      T   G+F Y  PEY  TG +T K D YSFG+I+++L+TGR
Sbjct:  647 VTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSI-----ETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGR 790          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.295e-26
Identity = 81/223 (36.32%), Postives = 115/223 (51.57%), Query Frame = 1
Query:    1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGL--AGEVR-------RAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 633
            V +LG C   E   LVYE++PN +L D L   S   P+ W+ R  IA E+A  L +LHS+    I H D+K  NILLD +  +K+ DFGI R V  D       H +T  +G+  Y DPEY ++   T KSD YSFG+++++LLTG  PV L    EVR        A+   +L  ILD  +  +        +  L  +C  L    RP +    + EL+++
Sbjct:  447 VKILGCCLETEVPILVYEFIPNRNLFDHLHNPSEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAID-----DTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEVRMLGAYFLEAMRNDRLHEILDARIKEECDREEVLAVAKLARRCLSLNSEHRPTMRDVFI-ELDRM 663          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.214e-25
Identity = 78/215 (36.28%), Postives = 112/215 (52.09%), Query Frame = 1
Query:    1 VTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK--GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRL------PVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 615
            V LLG C E     LVYE++PN SL   +F +     L W  RARI   +A GL +LH     +I+H DLK  NILLD+ ++ K+ DFG+ RL   D        R+   K  G+F Y  PEY R    + K+D YSFG+++L+++TGR        +GL     +    G+ +SI+D +     +    R + +GL C +    +RP  T SLV
Sbjct:  396 VKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQT------RAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGRSNKNYFEALGLPAYAWKCWVAGEAASIIDHVLSRSRSNEIMRFIHIGLLCVQENVSKRP--TMSLV 602          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.214e-25
Identity = 89/242 (36.78%), Postives = 117/242 (48.35%), Query Frame = 1
Query:    1 VTLLGAC---PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV---------GLAGEVRRAVSCGKLSSILDPLAGDWPTFV--------ARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEE-RPVPS 663
            V LLG     PE+  LVYEYL N SL   +F  +    L W+ R  I    A GL +LH     KI+H D+K  NILLDS+L +KI DFG+ R   +D       H STA  G+  Y  PEY   G LT   D YSFG+++L+++TG+             L  E  +    G+L  I DP   DW +            R+V +GL C +    E P + P + K L  L   EE  P+PS
Sbjct:  382 VRLLGCSCSGPESL-LVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDD-----KSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGELEKIYDPNL-DWKSQYDSHIIKKEIARVVQIGLLCTQ----EIPSLRPPMSKLLHMLKNKEEVLPLPS 612          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 79/210 (37.62%), Postives = 108/210 (51.43%), Query Frame = 1
Query:    1 VTLLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR------LPVGLAGEVRRAVSCGK---LSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERP 594
            V+L+G C E     LVYEY+ NG+L+  LF  SN+ PL WK R       A GL +LH+     I+H D+K  NILLD    +K+ DFG+ +        +   H STA KGSF Y DPEY R   LT KSD YSFG+++ + +  R      LP         A+S  K   L SI+D  L G++      +  ++  +C    G+ RP
Sbjct:  577 VSLIGFCDEHNEMILVYEYMANGTLRSHLFG-SNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPS----MDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSWQKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRP 781          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 77/223 (34.53%), Postives = 113/223 (50.67%), Query Frame = 1
Query:    1 VTLLGAC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV---------GLAGEVRRAVSCGKLSSIL-DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 633
            V LLG C   E   LVYE++  GSL D L     VS L W+ R  IA E+A  + +LHS     I+H D+K +NILLD  L++K+ DFG  +L   D   L     +T  +G+  Y DPEY+ T +L  KSD YSFG+++++L++G+  +          L      A    +L  I+ D +  +           + ++C  L G ERP +   +  ELE L
Sbjct:  165 VKLLGCCLETEVPLLVYEFITGGSLFDHLHGSMFVSSLTWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQL-----TTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECTRLKGEERPRMI-EVAAELETL 381          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25
Identity = 81/233 (34.76%), Postives = 116/233 (49.79%), Query Frame = 1
Query:    1 VTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSN-VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG---------LAGEVRRAVSCGKLSSILDPLAGDWPTF-VARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVP 660
            V LLG C E     LVYE++PNG+L + L   S+  +   W+ R RIA +IA  L +LHS+    I H D+K  NI+LD +  +K+ DFG  R VT D       H +T   G+  Y DPEY ++   T KSD YSFG+++ +L+TG   V          LA     A+   +LS I+D    D            +  +C  + GR+RP +   +  ELE++    E   P
Sbjct:  490 VKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVD-----HTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLAMKENRLSDIIDARIRDGCKLNQVTAAAKIARKCLNMKGRKRPSMR-QVSMELEKIRSYSEDMQP 716          
BLAST of FC920404 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25
Identity = 84/231 (36.36%), Postives = 117/231 (50.65%), Query Frame = 1
Query:    1 VTLLGACPEAWS--LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGR---------LPVGLAGEVRRAVSCGKLSSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERP---DITPSLVKELEQLHVAEE 648
            V+L+G C E     LVY+Y+ +G++++ L++  N S L WK R  I    A GL +LH+     I+H D+K  NILLD +  +K+ DFG+ +  T  TL     H ST  KGSF Y DPEY R   LT KSD YSFG+++ + L  R           V LA         G L  I+DP L G       ++  +  ++C    G ERP   D+  +L   L+    AEE
Sbjct:  594 VSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNPS-LPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSK--TGPTL--DHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVSLAEWAPYCYKKGMLDQIVDPYLKGKITPECFKKFAETAMKCVLDQGIERPSMGDVLWNLEFALQLQESAEE 819          
The following BLAST results are available for this feature:
BLAST of FC920404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
WAKLD_ARATH4.173e-2636.32Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
EXS_ARATH4.173e-2635.11Leucine-rich repeat receptor protein kinase EXS OS... [more]
TMK1_ARATH7.117e-2643.62Probable receptor protein kinase TMK1 OS=Arabidops... [more]
WAKLG_ARATH9.295e-2636.32Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
CRK38_ARATH1.214e-2536.28Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK2_ARATH1.214e-2536.78Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
Y1357_ARATH1.586e-2537.62Probable receptor-like protein kinase At1g30570 OS... [more]
WAKLS_ARATH1.586e-2534.53Putative wall-associated receptor kinase-like 16 O... [more]
WAKLJ_ARATH2.071e-2534.76Wall-associated receptor kinase-like 10 OS=Arabido... [more]
FERON_ARATH2.071e-2536.36Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC32007H03EF RVDevelop1 Citrus clementina cDNA clone C32007H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920404 ID=FC920404; Name=FC920404; organism=Citrus clementina; type=EST; length=700bp
GTGACTCTGCTTGGCGCATGCCCAGAAGCCTGGTCCCTTGTATATGAGTA
TTTGCCCAATGGTAGTCTCCAAGACCGTCTTTTCCGTAAAAGCAACGTTT
CTCCCTTGTTATGGAAGGATCGAGCTCGGATTGCAGCTGAAATAGCTAGC
GGCCTTTGCTTTTTGCACTCATCCAAACCTGAAAAGATTGTCCATGGTGA
TTTGAAACCACAAAACATTCTTCTAGACTCTGAACTCAGCAGCAAGATAT
GCGATTTTGGCATCTGCCGGCTGGTAACCGAGGACACCCTTTATTTGCCC
AGTTTTCATCGGAGCACTGCGCCAAAGGGTTCTTTTCCATATGCAGATCC
AGAGTACCACAGGACTGGAGTCCTAACTCCCAAGTCCGACAGTTACTCCT
TTGGGTTGATAATCCTACAGCTACTTACTGGAAGGCTGCCAGTTGGGTTA
GCAGGTGAAGTGCGAAGAGCTGTGTCATGCGGGAAGTTATCATCCATCTT
GGATCCATTAGCTGGAGATTGGCCTACGTTTGTTGCAAGGCGTTTAGTGG
ACCTGGGATTGCAATGCTGTGAATTGTACGGTAGGGAGCGACCCGATATC
ACACCATCTCTGGTAAAGGAATTGGAACAGCTGCATGTTGCAGAGGAACG
ACCAGTTCCATCATTCTTTTTGTGCCCCATTCTTCAGGAAATAATGCATG
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