FC920405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5A_XENLA (60S ribosomal protein L5-A OS=Xenopus laevis GN=rpl5-A PE=2 SV=2) HSP 1 Score: 243.432 bits (620), Expect = 8.743e-64 Identity = 119/201 (59.20%), Postives = 146/201 (72.64%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YEG VE TG++Y+VE + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ + EVHRK+I+ VA Sbjct: 5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGIKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQVEVTGDEYNVESIDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNVA 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5_STYCL (60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3) HSP 1 Score: 243.047 bits (619), Expect = 1.142e-63 Identity = 121/201 (60.20%), Postives = 145/201 (72.14%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K K+KAYFKRYQVKYKRRR+GKTDY AR RL+ QDKNKYNTPKYR +VRFTNKDI QI A I GD+V+ +AYAHELPRYG++VGLTNYAAAYCTGLLL+RR+L +D YEG E G+++ VE + + FRA LDVGL +TTTG +VF IPHS KRF G+ +S AEVHR +I+ G V+ Sbjct: 5 KVVKNKAYFKRYQVKYKRRRQGKTDYFARKRLVVQDKNKYNTPKYRMIVRFTNKDIVCQIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDEIYEGQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTGAKVFGAMKGAADGGLDIPHSTKRFPGYDDESGDFSAEVHRSHIFGGHVS 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5_CHICK (60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 PE=2 SV=2) HSP 1 Score: 243.047 bits (619), Expect = 1.142e-63 Identity = 120/201 (59.70%), Postives = 147/201 (73.13%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YEG VE TG++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I VA Sbjct: 5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYEGQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVA 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5_BOVIN (60S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=2 SV=3) HSP 1 Score: 243.047 bits (619), Expect = 1.142e-63 Identity = 121/201 (60.20%), Postives = 146/201 (72.64%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ AEVHRK+I VA Sbjct: 5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFSAEVHRKHIMGQNVA 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5B_XENLA (60S ribosomal protein L5-B OS=Xenopus laevis GN=rpl5-B PE=2 SV=2) HSP 1 Score: 243.047 bits (619), Expect = 1.142e-63 Identity = 118/201 (58.71%), Postives = 146/201 (72.64%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YEG VE TG++Y+VE + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ + EVHRK+I+ +A Sbjct: 5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQVEVTGDEYNVESVDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNIA 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5_MACFA (60S ribosomal protein L5 OS=Macaca fascicularis GN=RPL5 PE=2 SV=3) HSP 1 Score: 241.891 bits (616), Expect = 2.544e-63 Identity = 120/201 (59.70%), Postives = 147/201 (73.13%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAH+LP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I VA Sbjct: 5 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHKLPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVA 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5_RAT (60S ribosomal protein L5 OS=Rattus norvegicus GN=Rpl5 PE=1 SV=3) HSP 1 Score: 240.35 bits (612), Expect = 7.402e-63 Identity = 119/201 (59.20%), Postives = 146/201 (72.64%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K K+KAYFKRYQV+++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE G++Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I VA Sbjct: 5 KVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVNGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVA 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5_HELAN (60S ribosomal protein L5 OS=Helianthus annuus GN=RPL5A PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.402e-63 Identity = 121/201 (60.20%), Postives = 150/201 (74.63%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K K+K YFKRYQVK+KRRREGKTDY AR RLI QDKNKYNTPKYR VVRF+N+DIT Q+ + I GD +L +AYAHELP+YG++VGLTNYAAAYCTGLLLAR++L L +D Y G+ E TGE+++V+P E+ FR LDVGL++TTTG RVF I HS KRF GF +SK+ +A+VHR++I+ VA Sbjct: 5 KVVKNKQYFKRYQVKFKRRREGKTDYFARKRLIAQDKNKYNTPKYRLVVRFSNRDITCQVAYSRIEGDKILCAAYAHELPQYGVKVGLTNYAAAYCTGLLLARKLLSQLGLDKLYIGSTEVTGEEFNVKPVEDGPGAFRCYLDVGLMRTTTGARVFGAMKGAVDGGLNILHSTKRFPGFDSESKEFNADVHRQHIFGQHVA 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5_MOUSE (60S ribosomal protein L5 OS=Mus musculus GN=Rpl5 PE=1 SV=3) HSP 1 Score: 238.81 bits (608), Expect = 2.154e-62 Identity = 119/201 (59.20%), Postives = 145/201 (72.14%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENR-RPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGRVA 704 K K+KAYFKRYQV+++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DI QI A I GD+++ +AYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE G +Y+VE + + F LD GL +TTTGN+VF IPHS KRF G+ +SK+ +AEVHRK+I VA Sbjct: 5 KVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVA 205
BLAST of FC920405 vs. ExPASy Swiss-Prot
Match: RL5_TOXCI (60S ribosomal protein L5 OS=Toxoptera citricida GN=RpL5 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.813e-62 Identity = 119/195 (61.03%), Postives = 145/195 (74.36%), Query Frame = 3 Query: 105 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPT-ENRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQLDAEVHRKYI 686 K K+K YFKRYQVK+KRRREGKTDY AR RLI QDKNKY+TPKYR +VRF+N+DIT Q+ + I GD ++ +AY+HELP+YG++VGLTNYAAAYCTGLL+ARR+LK L +D YEG EA GE+Y VEP E FR LDVGL+KT+TG RVF IPHS KRF G+ ++K+ AE HRK+I Sbjct: 5 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLIVQDKNKYDTPKYRLIVRFSNRDITCQVAHSRIEGDKIVCAAYSHELPKYGVKVGLTNYAAAYCTGLLVARRLLKKLGLDRLYEGLKEANGEEYYVEPADEGPNAFRCNLDVGLMKTSTGARVFGAMKGAVDGGFNIPHSVKRFPGYDAEAKEYSAETHRKHI 199 The following BLAST results are available for this feature:
BLAST of FC920405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920405 ID=FC920405; Name=FC920405; organism=Citrus clementina; type=EST; length=708bpback to top |