FC920407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920407 vs. ExPASy Swiss-Prot
Match: PRP4B_MOUSE (Serine/threonine-protein kinase PRP4 homolog OS=Mus musculus GN=Prpf4b PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.938e-13 Identity = 39/120 (32.50%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 319 SPPRRDD--DREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDR-QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFEFLKR 669 +P RD+ D EG+Y N+GE L RY + G+G F V+ D + + VA+K++R+ + + E++ L+ L D HC+++ F ++ H+C+VFE L +L E LK+ Sbjct: 661 NPNLRDNWTDAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKK 780
BLAST of FC920407 vs. ExPASy Swiss-Prot
Match: PRP4B_HUMAN (Serine/threonine-protein kinase PRP4 homolog OS=Homo sapiens GN=PRPF4B PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.938e-13 Identity = 39/120 (32.50%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 319 SPPRRDD--DREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDR-QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFEFLKR 669 +P RD+ D EG+Y N+GE L RY + G+G F V+ D + + VA+K++R+ + + E++ L+ L D HC+++ F ++ H+C+VFE L +L E LK+ Sbjct: 661 NPNLRDNWTDAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKK 780
BLAST of FC920407 vs. ExPASy Swiss-Prot
Match: PRP4B_BOVIN (Serine/threonine-protein kinase PRP4 homolog OS=Bos taurus GN=PRPF4B PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.938e-13 Identity = 39/120 (32.50%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 319 SPPRRDD--DREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDR-QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFEFLKR 669 +P RD+ D EG+Y N+GE L RY + G+G F V+ D + + VA+K++R+ + + E++ L+ L D HC+++ F ++ H+C+VFE L +L E LK+ Sbjct: 662 NPNLRDNWTDAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKK 781
BLAST of FC920407 vs. ExPASy Swiss-Prot
Match: SPK1_CAEEL (Serine/threonine-protein kinase spk-1 OS=Caenorhabditis elegans GN=spk-1 PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12 Identity = 57/195 (29.23%), Postives = 87/195 (44.62%), Query Frame = 1 Query: 139 LQILRLKIIQRNNK*QTMMEQERTTKRRRLA-WDVAPSEAEAQRALVVGHE---------GATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG--GSSHCVQIRNWFDYR----NHICIVFEKLGPSLFEFLKRNN 675 + I R II RNNK + E RL V+P +++ GH G + RD R G++ N+G+ RY ++ K+G G F V WD Q + VA+K+V+S Y +AA+ EI +L + D G VQ+ + F H+ +VFE LG +L + + R+N Sbjct: 333 ISIPRPSIIPRNNK-----KTEVNANEERLDDLSVSPGRSDSPGGGGGGHSDSFQDPMDPGEQLGSDDEEQEDPRDYKRGGYHPVNIGDVFNARYHVIRKLGWGHFSTVWLAWDTQDKRFVAMKIVKSAEHYTEAALDEIKLLLSVRSADPNDIGCHKVVQLLDEFTVTGINGQHVAMVFEVLGCNLLKLIIRSN 522
BLAST of FC920407 vs. ExPASy Swiss-Prot
Match: YAK1_ENCCU (Probable dual specificity protein kinase YAK1 homolog OS=Encephalitozoon cuniculi GN=YAK1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11 Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 1 Query: 367 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFEFLK 666 L +N + +Y I+ +G GTFG+V+ C +E VAIKVV++ KY + M E+ +L L N+ + V I++ F Y+ H+CIV E LG +L+ FLK Sbjct: 32 LAKNKSQKYMIIDMLGTGTFGQVVRCVGSDGEE-VAIKVVKNQPKYYNYEMNEVRILHKLLYNNL--NDRFVTIKDVFMYKQHLCIVEELLGRNLYTFLK 128
BLAST of FC920407 vs. ExPASy Swiss-Prot
Match: DSK1_SCHPO (Protein kinase dsk1 OS=Schizosaccharomyces pombe GN=dsk1 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11 Identity = 39/113 (34.51%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 349 GHYVFNLGENLTPR-YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG--GSSHCVQIRNWFDYRN----HICIVFEKLGPSLFEFLK 666 G++ +GE R Y + K+G G F V +DR + RVA+KVVRS YR+ ++ EI +LQ + + D+ G H + + ++F +R H+C+VFE LG +L ++ Sbjct: 66 GYHPVYIGEEFHHRRYVVERKLGWGHFSTVWLAYDRAAKRRVALKVVRSAEHYRETSIDEIRILQKIREGDEKHLGKKHIISLLDYFVHRGPNGAHVCMVFEVLGENLLSLIQ 178
BLAST of FC920407 vs. ExPASy Swiss-Prot
Match: SRPK1_HUMAN (Serine/threonine-protein kinase SRPK1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.622e-11 Identity = 45/168 (26.79%), Postives = 82/168 (48.81%), Query Frame = 1 Query: 214 KRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDRE--------GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR------NHICIVFEKLGPSLFEFLKRNN 675 KR + D A ++E Q H + + DD++E G+++ +G+ RY ++ K+G G F V WD Q ++ VA+KVV+S Y + A+ EI +L+ + +D + + ++ D++ HIC+VFE LG L +++ ++N Sbjct: 13 KRTKAKKDKAQRKSETQHRGSAPHSESDLPEQEEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSN 180
BLAST of FC920407 vs. ExPASy Swiss-Prot
Match: SRPK1_PONAB (Serine/threonine-protein kinase SRPK1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11 Identity = 45/168 (26.79%), Postives = 81/168 (48.21%), Query Frame = 1 Query: 214 KRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDRE--------GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR------NHICIVFEKLGPSLFEFLKRNN 675 KR + D A + E Q H + + DD++E G+++ +G+ RY ++ K+G G F V WD Q ++ VA+KVV+S Y + A+ EI +L+ + +D + + ++ D++ HIC+VFE LG L +++ ++N Sbjct: 13 KRTKAKKDKAQRKPETQHRGSAPHSESDLPEQEEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSN 180 The following BLAST results are available for this feature:
BLAST of FC920407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920407 ID=FC920407; Name=FC920407; organism=Citrus clementina; type=EST; length=677bpback to top |