FC920412

Overview
NameFC920412
Unique NameFC920412
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14138 contig Ccv1_Contig14138:1..731. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOSE (Chaperone protein dnaJ OS=Escherichia coli (strain SE11) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3 
Query:  192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAI----IDPAAIFAMLFGSELFEDYIG 479
            +YY++LGVS TA E EIKKAY   A K HPD+N  D  A   F+ + EAY+VL+D  +R AYD YG +      +        A F+ +FG ++F D  G
Sbjct:    5 DYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFG-DVFGDIFG 103
[Close]
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOLU (Chaperone protein dnaJ OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3 
Query:  192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAI----IDPAAIFAMLFGSELFEDYIG 479
            +YY++LGVS TA E EIKKAY   A K HPD+N  D  A   F+ + EAY+VL+D  +R AYD YG +      +        A F+ +FG ++F D  G
Sbjct:    5 DYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFG-DVFGDIFG 103
[Close]
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOLC (Chaperone protein dnaJ OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3 
Query:  192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAI----IDPAAIFAMLFGSELFEDYIG 479
            +YY++LGVS TA E EIKKAY   A K HPD+N  D  A   F+ + EAY+VL+D  +R AYD YG +      +        A F+ +FG ++F D  G
Sbjct:    5 DYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFG-DVFGDIFG 103
[Close]
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOL6 (Chaperone protein dnaJ OS=Escherichia coli O6 GN=dnaJ PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3 
Query:  192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAI----IDPAAIFAMLFGSELFEDYIG 479
            +YY++LGVS TA E EIKKAY   A K HPD+N  D  A   F+ + EAY+VL+D  +R AYD YG +      +        A F+ +FG ++F D  G
Sbjct:    5 DYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFG-DVFGDIFG 103
[Close]
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOHS (Chaperone protein dnaJ OS=Escherichia coli O9:H4 (strain HS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3 
Query:  192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAI----IDPAAIFAMLFGSELFEDYIG 479
            +YY++LGVS TA E EIKKAY   A K HPD+N  D  A   F+ + EAY+VL+D  +R AYD YG +      +        A F+ +FG ++F D  G
Sbjct:    5 DYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFG-DVFGDIFG 103
[Close]
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO8A (Chaperone protein dnaJ OS=Escherichia coli O8 (strain IAI1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3 
Query:  192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAI----IDPAAIFAMLFGSELFEDYIG 479
            +YY++LGVS TA E EIKKAY   A K HPD+N  D  A   F+ + EAY+VL+D  +R AYD YG +      +        A F+ +FG ++F D  G
Sbjct:    5 DYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFG-DVFGDIFG 103
[Close]
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO81 (Chaperone protein dnaJ OS=Escherichia coli O81 (strain ED1a) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3 
Query:  192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAI----IDPAAIFAMLFGSELFEDYIG 479
            +YY++LGVS TA E EIKKAY   A K HPD+N  D  A   F+ + EAY+VL+D  +R AYD YG +      +        A F+ +FG ++F D  G
Sbjct:    5 DYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFG-DVFGDIFG 103
[Close]
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO7I (Chaperone protein dnaJ OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3 
Query:  192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAI----IDPAAIFAMLFGSELFEDYIG 479
            +YY++LGVS TA E EIKKAY   A K HPD+N  D  A   F+ + EAY+VL+D  +R AYD YG +      +        A F+ +FG ++F D  G
Sbjct:    5 DYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFG-DVFGDIFG 103
[Close]
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO5E (Chaperone protein dnaJ OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3 
Query:  192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAI----IDPAAIFAMLFGSELFEDYIG 479
            +YY++LGVS TA E EIKKAY   A K HPD+N  D  A   F+ + EAY+VL+D  +R AYD YG +      +        A F+ +FG ++F D  G
Sbjct:    5 DYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAETKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFG-DVFGDIFG 103
[Close]
BLAST of FC920412 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO57 (Chaperone protein dnaJ OS=Escherichia coli O157:H7 GN=dnaJ PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.141e-13
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3 
Query:  192 EYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAI----IDPAAIFAMLFGSELFEDYIG 479
            +YY++LGVS TA E EIKKAY   A K HPD+N  D  A   F+ + EAY+VL+D  +R AYD YG +      +        A F+ +FG ++F D  G
Sbjct:    5 DYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFG-DVFGDIFG 103
The following BLAST results are available for this feature:
BLAST of FC920412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_ECOSE1.141e-1343.00Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOLU1.141e-1343.00Chaperone protein dnaJ OS=Escherichia coli O17:K52... [more]
DNAJ_ECOLC1.141e-1343.00Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOL61.141e-1343.00Chaperone protein dnaJ OS=Escherichia coli O6 GN=d... [more]
DNAJ_ECOHS1.141e-1343.00Chaperone protein dnaJ OS=Escherichia coli O9:H4 (... [more]
DNAJ_ECO8A1.141e-1343.00Chaperone protein dnaJ OS=Escherichia coli O8 (str... [more]
DNAJ_ECO811.141e-1343.00Chaperone protein dnaJ OS=Escherichia coli O81 (st... [more]
DNAJ_ECO7I1.141e-1343.00Chaperone protein dnaJ OS=Escherichia coli O7:K1 (... [more]
DNAJ_ECO5E1.141e-1343.00Chaperone protein dnaJ OS=Escherichia coli O157:H7... [more]
DNAJ_ECO571.141e-1343.00Chaperone protein dnaJ OS=Escherichia coli O157:H7... [more]

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Properties
Property NameValue
Genbank descriptionC32008A07EF RVDevelop1 Citrus clementina cDNA clone C32008A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920412 ID=FC920412; Name=FC920412; organism=Citrus clementina; type=EST; length=731bp
GGAAGGAATCAGAGGTCAGCGCGCGGGAGAGTAAATCTGCTTTCATCCTT
TTTGTATGCTCTATTCTATCTGTTATCTTTCTGAATCTGCTTCGTAACTA
ATCAGTTTGATTTAGATTGTAAATCGAAGAAAGCTAAGCTAGACTAGTAG
TAATTTTCGGGTCTTGAGAATCAGTGATGGTTAAGGAGACGGAATATTAC
GACGTCCTAGGCGTCAGCCCAACGGCTTCGGAGGCCGAGATCAAGAAAGC
TTACTACATCAAGGCACGTAAGGTTCACCCTGATAAAAACCCAAATGATC
CTCTTGCTGCTCAAAATTTTCAGGTTTTGGGAGAGGCTTACCAGGTATTG
AGTGATCCAGCCCAACGGCAAGCATATGATGCTTATGGGAAATCAGGAAT
CTCAACTGAAGCAATTATTGATCCTGCAGCAATCTTCGCGATGCTTTTTG
GAAGTGAGCTTTTTGAGGATTATATAGGTCAGCTTGCCATGGCTTCAGTG
GCTTCTCTAGACATTTTCACTGAAGGGGAAGAGTTTGATGCTAAAAAGTT
GCAAGACAAAATGAAGGTTGTTCAGAAGGAAAGGGAGGAAAAACTTGCAG
ATATACTAAGAGGTCGACTCAACCAATATGTACAAGGGAAACAAGAGGAT
TTCATTAATTATGCTGAAGCTGAAGTTTCAAGGCTGTCTAATGCTGCGTA
TGGTGGTGATATGNTGAATACAATTGGCTAT
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