FC920418

Overview
NameFC920418
Unique NameFC920418
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:3..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_CANAL (Peroxisomal catalase OS=Candida albicans GN=CTA1 PE=2 SV=4)

HSP 1 Score: 167.162 bits (422), Expect = 7.245e-41
Identity = 86/181 (47.51%), Postives = 112/181 (61.88%), Query Frame = 2
Query:  128 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVG 670
            AP  T + G P+     +  VG  GP+LL+D++L++ LAHF RERIPERVVHA+G+ A G FE T DI+ +  A      G +T +  RFSTV  E GS +T RDPRGFA K YT EGN DL+ N+ PVFFIRD  KFP  IH  K NP++H+++     D+ +   ES+      F D G
Sbjct:    2 APTFTNSNGQPIPEPFATQRVGQHGPLLLQDFNLIDSLAHFDRERIPERVVHAKGSGAYGVFEVTDDITDICAAKFLDTVGKKTRIFTRFSTVGGELGSADTARDPRGFATKIYTEEGNLDLVYNNTPVFFIRDPSKFPHFIHTQKRNPETHLKDANMFWDYLTSNEESIHQVMVLFSDRG 182          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATB_STAXY (Catalase B OS=Staphylococcus xylosus GN=katB PE=3 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 9.462e-41
Identity = 83/179 (46.37%), Postives = 119/179 (66.48%), Query Frame = 2
Query:  137 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            +T+  GAPV +  +S+T G RGP++++D++ +E++AHF RE IPER +HA+G+ A G F  T+DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  + HA K +P+++++      DF + LPE+L   +    D GI
Sbjct:    7 LTSLFGAPVSDRENSMTAGPRGPLVMQDWYFLEQMAHFDREVIPERRMHAKGSGAFGTFTVTNDITQYTSASIFSEVGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTDEGNWDLVGNNTPVFFFRDPKLFASLNHAVKRDPRTNMRSAQNNWDFWTSLPEALHQVTILMSDRGI 185          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_ASPFU (Catalase A OS=Aspergillus fumigatus GN=catA PE=3 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 8.010e-40
Identity = 93/194 (47.94%), Postives = 113/194 (58.25%), Query Frame = 2
Query:  122 HNAPFMTTNAGAPVWNDNHSLTVGS---RGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE-------YWRILDFCSHLPESLSTFSWFFDDVGI 673
            H    +TT+ G  V N +  L V +    GP LLED    EK+  F  ERIPERVVHARG  A G F+    I  LT A +       TPV VRFSTV   RGS +T+RD RGFAVKFYT EGNWD++GN+IPVFFI+DA+KFPD +HA KP P + + +       +W   DF    PE+   F W   D  I
Sbjct:   37 HTQQPLTTDHGVRVSNTDQWLRVTNDRRTGPSLLEDQIAREKIHRFDHERIPERVVHARGTGAFGNFKLKESIEDLTYAGVLTDTSRNTPVFVRFSTVQGSRGSADTVRDVRGFAVKFYTDEGNWDIVGNNIPVFFIQDAVKFPDFVHAVKPEPHNEVPQAQTAHNNFW---DFVYLHPEATHMFMWAMSDRAI 227          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CAT1_NEUCR (Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.046e-39
Identity = 99/217 (45.62%), Postives = 126/217 (58.06%), Query Frame = 2
Query:   53 ITVAKSSARNIAMDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSR---GPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE-------YWRILDFCSHLPESLSTFSWFFDDVGI 673
            +T A SS +   +D  K     T  +  +TT+ G      +  L + S    GP LLED    E++  F  ERIPERVVHARG+ A G F+     S LT A +      +TPV VRFSTV+  RGS +T+RD RGFAVKFYT EGNWDL+GN+IPVFFI+DAIKFPDVIHA KP P + + +       +W   DF  +  E+   F+W   D  I
Sbjct:   16 LTSAPSSKK---VDDLKNEFKETDKSARLTTDYGVKQTTADDWLRIVSDDKIGPSLLEDPFARERIMRFDHERIPERVVHARGSGAFGKFKVYESASDLTMAPVLTDTSRETPVFVRFSTVLGSRGSADTVRDVRGFAVKFYTEEGNWDLVGNNIPVFFIQDAIKFPDVIHAGKPEPHNEVPQAQSAHNNFW---DFQFNHTEATHMFTWAMSDRAI 226          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_MICLU (Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.366e-39
Identity = 87/186 (46.77%), Postives = 118/186 (63.44%), Query Frame = 2
Query:  116 TTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            TT +A   T   GAP  +D  SLTVGS GP++L D HL+E   HF R  IPER  HA+G+ A G FE T D+S  T A +F+ PG +T  ++RFSTV  E GSP+T RD RGFA++FYT EGN+DL+GN+ P+FF+RD +KF   I + K  P S +++     DF ++ PES    ++     G+
Sbjct:    6 TTPHATGSTRQNGAPAVSDRQSLTVGSEGPIVLHDTHLLETHQHFNRMNIPERRPHAKGSGAFGEFEVTEDVSKYTKALVFQ-PGTKTETLLRFSTVAGELGSPDTWRDVRGFALRFYTEEGNYDLVGNNTPIFFLRDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQVTYLMGPRGL 190          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_CANBO (Peroxisomal catalase OS=Candida boidinii GN=CTA1 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.366e-39
Identity = 86/190 (45.26%), Postives = 114/190 (60.00%), Query Frame = 2
Query:  125 NAPFMTTNAGAPVWNDNHSLTVGSR--------GPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVG 670
            N P  TT+ G PV +   +  +           GP+LL+D+  ++ LAHF RERIPERVVHA+GA A G FE T DIS +  A      G +T +  RFSTV  E+GS ++ RDPRGFA KFYT EGN DL+ N+ P+FFIRD  KFP  IH  K NP ++ ++     D+ ++ PESL    + F + G
Sbjct:    3 NPPTYTTSQGCPVSDAFSTQRISGTKISIKTPVGPLLLQDFKFLDSLAHFDRERIPERVVHAKGAGAYGVFEVTEDISDICSAKFLDTVGKKTKIFTRFSTVGGEKGSSDSARDPRGFATKFYTEEGNLDLVYNNTPIFFIRDPTKFPHFIHTQKRNPATNCKDANMFWDYLTNNPESLHQIMYLFSNRG 192          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_EMENI (Catalase A OS=Emericella nidulans GN=catA PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.785e-39
Identity = 91/194 (46.91%), Postives = 112/194 (57.73%), Query Frame = 2
Query:  122 HNAPFMTTNAGAPVWNDNHSLTVGSR---GPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE-------YWRILDFCSHLPESLSTFSWFFDDVGI 673
            H      T+ G  + + +H L V +    GP LLED+   E++  F  ERIPERVVHARG  A G F     I  LT A +       TPV VRFSTV   RGS +T+RD RGFAVKFYT EGNWD++GN+IPVFFI+DAIKFPD +HA KP P + + +       +W   DF    PE+   F W   D  I
Sbjct:   37 HTDQEQRTDFGVAITDPDHWLRVTNETHSGPSLLEDHIARERIHRFDHERIPERVVHARGTGAYGNFTLKESIEDLTYAGVLTDTSRNTPVFVRFSTVQGSRGSADTVRDVRGFAVKFYTDEGNWDIVGNNIPVFFIQDAIKFPDFVHAVKPEPHNEVPQAQTAHNNFW---DFVYLHPEATHMFMWAMSDRAI 227          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_STAWA (Catalase OS=Staphylococcus warneri GN=katA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.511e-38
Identity = 80/174 (45.98%), Postives = 114/174 (65.52%), Query Frame = 2
Query:  152 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGI 673
            GAPV +  +S+T G RGP+L++D + +E+++HF RE IPER +HA+G+ A G F  T+DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GNWDL+GN+ PVFF RD   F  +  A K +P+++++      DF + LPE+L   +    D GI
Sbjct:   13 GAPVSDRENSMTAGPRGPLLMQDIYFLEQMSHFDREVIPERRMHAKGSGAFGTFTVTNDITQYTSAKMFSEVGKQTEMFARFSTVSGERGAADAERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRSAQNNWDFWTGLPEALHQVTILMSDRGI 186          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATA_PICAN (Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.577e-38
Identity = 86/192 (44.79%), Postives = 116/192 (60.42%), Query Frame = 2
Query:  125 NAPFMTTNAGAPVWND--NHSLTVGSRG--------PVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVG 670
            N P  TT+ G PV +      + + S G        P+LL+D+ L++ L+HF RERIPERVVHA+GA A G FE T DI+ +  A      G +T +  RFSTV  E+GS +T RDPRGFA KFYT +GN DL+ N+ P+FFIRD IKFP  IH  K NP +++++     D+ +   ESL    + F + G
Sbjct:    3 NPPVFTTSQGCPVSDPFTTQRIPLDSTGYKYAPPIGPLLLQDFKLIDTLSHFDRERIPERVVHAKGAGAYGVFEVTDDITDVCSAKFLDTVGKKTRIFTRFSTVGGEKGSADTARDPRGFATKFYTEDGNLDLVYNNTPIFFIRDPIKFPHFIHTQKRNPATNLKDPNMFWDYLTANDESLHQVMYLFSNRG 194          
BLAST of FC920418 vs. ExPASy Swiss-Prot
Match: CATR_ASPNG (Catalase R OS=Aspergillus niger GN=catR PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.365e-38
Identity = 85/184 (46.20%), Postives = 113/184 (61.41%), Query Frame = 2
Query:  134 FMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE----YWRILDFCSHLPESLSTFSWFFDDVGI 673
            +MTT+ G P+ +D  SL  G RGP LLED+   +KL  F  ER+PERVVHARGA A G F+   D S++T AD   A   +TP+  RFSTV+  RGS +T RD  G A +FYT EGN+D++G +   FFI+DAI+FPD++HA KP P + I +    +    DF S    +L +  W     GI
Sbjct:   57 YMTTDFGTPI-SDQTSLKAGPRGPTLLEDFIFRQKLQRFDHERVPERVVHARGAGAYGTFKSYADWSNVTAADFLSANDKETPMFCRFSTVVGFRGSVDTARDVHGHACRFYTDEGNYDIVGINFAPFFIQDAIQFPDLVHAIKPMPNNEIPQAATAHTSAWDFFSQQSTALHSALWLMSGNGI 239          
The following BLAST results are available for this feature:
BLAST of FC920418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_CANAL7.245e-4147.51Peroxisomal catalase OS=Candida albicans GN=CTA1 P... [more]
CATB_STAXY9.462e-4146.37Catalase B OS=Staphylococcus xylosus GN=katB PE=3 ... [more]
CATA_ASPFU8.010e-4047.94Catalase A OS=Aspergillus fumigatus GN=catA PE=3 S... [more]
CAT1_NEUCR1.046e-3945.62Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2[more]
CATA_MICLU1.366e-3946.77Catalase OS=Micrococcus luteus GN=katA PE=1 SV=2[more]
CATA_CANBO1.366e-3945.26Peroxisomal catalase OS=Candida boidinii GN=CTA1 P... [more]
CATA_EMENI1.785e-3946.91Catalase A OS=Emericella nidulans GN=catA PE=2 SV=... [more]
CATA_STAWA1.511e-3845.98Catalase OS=Staphylococcus warneri GN=katA PE=3 SV... [more]
CATA_PICAN2.577e-3844.79Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=... [more]
CATR_ASPNG3.365e-3846.20Catalase R OS=Aspergillus niger GN=catR PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32008B05EF RVDevelop1 Citrus clementina cDNA clone C32008B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920418 ID=FC920418; Name=FC920418; organism=Citrus clementina; type=EST; length=673bp
ACACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATAA
TAATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTAC
AAATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATGC
CGGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGAG
GTCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTTT
GCCAGGGAGAGGATTCCAGAACGCGTCGTCCATGCTAGGGGAGCCAGTGC
TAAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCTG
ATCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCC
ACTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGG
ATTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGTA
ACAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGTG
ATCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTGGAG
GATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCT
GGTTCTTTGATGATGTGGGTATT
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