FC920427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC5_TRAVI (Laccase-5 OS=Trametes villosa GN=LCC5 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.404e-13 Identity = 51/174 (29.31%), Postives = 78/174 (44.83%), Query Frame = 3 Query: 168 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGIKQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQG 665 T+++ ++P G+ + +L G FPGP + D +NVI+ L +L W+GI Q +W DG N CPI +++ Y F DQ G+++Y G G + D D T++ + DW+ T K+ G + P PD VLING G Sbjct: 32 TISNADVTPDGITRAAVLAGGVFPGPLITGNKGDEFQINVIDNLTNETMLKSTTIHWHGIFQAGTNWADGAAFVNQCPIATGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDPDDPNASLYDVDDDTTVITLADWYHTAAKL-------GPAFPAGPDSVLINGLG 198
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC5_TRAVE (Laccase-5 OS=Trametes versicolor GN=LCC5 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.404e-13 Identity = 51/174 (29.31%), Postives = 78/174 (44.83%), Query Frame = 3 Query: 168 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGIKQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQG 665 T+++ ++P G+ + +L G FPGP + D +NVI+ L +L W+GI Q +W DG N CPI +++ Y F DQ G+++Y G G + D D T++ + DW+ T K+ G + P PD VLING G Sbjct: 32 TISNADVTPDGITRAAVLAGGVFPGPLITGNKGDEFQINVIDNLTNETMLKSTTIHWHGIFQAGTNWADGAAFVNQCPIATGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDPDDANASLYDVDDDTTVITLADWYHTAAKL-------GPAFPAGPDSVLINGLG 198
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC3_TRAVI (Laccase-3 OS=Trametes villosa GN=LCC3 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.404e-13 Identity = 48/172 (27.91%), Postives = 76/172 (44.19%), Query Frame = 3 Query: 171 VTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQG 665 + + ++P GV ++ +L G FPGP + DN +NV++KL +LT W+G+ Q +W DG T CPI ++ Y F+ DQ G+Y+Y + G G + D + T++ + DW+ T +L P LING G Sbjct: 31 IVNKVIAPDGVARDTVLAGGTFPGPLITGKKGDNFRINVVDKLVNQTMLTSTTIHWHGMFQHTTNWADGPAFVTQCPITTGDDFLYNFRVPDQTGTYWYHSHLALQYCDGLRGPLVIYDPHDPQAYLYDVDDESTVITLADWYHTPAPLLP-----------PAATLINGLG 191
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC17_ORYSJ (Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.404e-13 Identity = 45/174 (25.86%), Postives = 82/174 (47.13%), Query Frame = 3 Query: 153 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGG--INXXXXXXXXXXXXXXDGDFTLLIGDWFKTNH-KILRQTLDSGKSLPFPDGVLINGQ 662 +++ + + T+ L ++ +NGQFPGP L++ D++I+N+IN+ L W+G++Q + W DG T CP+ P +Y Y+F Q G+ ++ + RA YG I +L+G+W+ N ++R +G + D + +N Q Sbjct: 25 QYHEFVIRETTVKRLCKSHNIMTVNGQFPGPTLEINEGDSLIINLINRGRYNMTLHWHGVRQMRTGWSDGPEYVTQCPVRPGQSYRYRFTVAAQEGTLWWHAHSSWLRAT-VYGALLIRPRDGTSYPFDVQPTRELAPILLGEWWDMNPVDVVRAATRTGAAPNISDALTVNAQ 197
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC15_ORYSJ (Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC15 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.404e-13 Identity = 43/169 (25.44%), Postives = 79/169 (46.75%), Query Frame = 3 Query: 159 YTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDGV-LGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQ 662 +T+ V+ ++ L ++NGQ PGP ++V D++ ++V+NK + W+G+ Q N W DGV + T PI PN N+TY+F Q G+ ++ R I + ++IG+W++ + + + + +G + G ING+ Sbjct: 43 HTFVVSQVNMTHLCKEMAFTVVNGQLPGPTIEVTEGDSVTVHVVNKSPYNLTIHWHGVYQLLNCWNDGVPMITQRPIQPNHNFTYRFNVAGQEGTLWWHAHDAFLRGTVHGALIIRPRHGAASYPFPRPHREVPIIIGEWWEKDLPQVDRNMTNGYFDDYSSGSTINGK 211
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC6_ORYSJ (Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.833e-13 Identity = 51/173 (29.48%), Postives = 84/173 (48.55%), Query Frame = 3 Query: 159 YTWTVTSGTLSPLGVP--QEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT--WNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTNHKILR-QTLDSGKSLPFPDGVLING 659 +T+ V + +L + P V +NG+ PGP+++ D ++++VIN D P+ +T W+G+ QR W DG + T CPI P YTY+F Q G+ ++ + RA YG + + T+L+G+W+ + L Q+ +G P D ING Sbjct: 27 HTFNVATLSLPRICQPGNTSVTAVNGRVPGPQVEAREGDTVVIHVIN--DSPYNVTVHWHGVFQRGTPWADGPAMVTQCPIRPGHRYTYRFAVAGQEGTLWWHAHSSYMRAT-VYGALVIRPRRAGGYPFPTPYEEKTVLLGEWWNGDPVALESQSFSTGIPAPNADAYTING 196
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC4_TRAVI (Laccase-4 OS=Trametes villosa GN=LCC4 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.395e-13 Identity = 50/174 (28.74%), Postives = 77/174 (44.25%), Query Frame = 3 Query: 168 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGIKQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQG 665 T+++G +SP G + +L NG FPGP + DN +NVI+ L +L W+G Q+ +W DG N CPI +++ Y F DQ G+++Y G G + D + T++ + DW+ T + G + P D LING G Sbjct: 31 TISNGDVSPDGFTRAAVLANGVFPGPLITGNKGDNFQINVIDNLSNETMLKSTSIHWHGFFQKGTNWADGAAFVNQCPIATGNSFLYDFTATDQAGTFWYHSHLSTQYCDGLRGPMVVYDPSDPHADLYDVDDETTIITLSDWYHTAASL-------GAAFPIGSDSTLINGLG 197
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC22_ORYSJ (Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.395e-13 Identity = 44/171 (25.73%), Postives = 77/171 (45.03%), Query Frame = 3 Query: 153 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTN-HKILRQTLDSGKSLPFPDGVLING 659 R Y + V ++ L + ++ +NG+FPGP L DN+++ V+N + + W+G++Q + W DG T CPI P S++ Y F Q G+ + RA +G I + +++G+W+K + ++ Q + G D ING Sbjct: 31 RHYKFNVVMRNMTRLCSTKPILTVNGKFPGPTLYAREGDNVLVKVVNHVAHNVTIHWHGVRQIRTGWYDGPAYITQCPIQPGSSFLYNFTITGQRGTLLWHAHINWLRAT-VHGAIVILPKLGVPYPFPAPHKEAVIVLGEWWKEDTETVINQAMQLGVGPNISDSHTING 200
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC2_ORYSJ (Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.127e-13 Identity = 45/170 (26.47%), Postives = 76/170 (44.71%), Query Frame = 3 Query: 159 YTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKNSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTN-HKILRQTLDSGKSLPFPDGVLINGQ 662 Y + + +S L + ++ +NG +PGP + D +I+NV N + + W+G+KQR+N W DG T CPI +Y Y F Q G+ ++ RA +G I D + +++G+W+ + + RQ G + D ING+ Sbjct: 31 YQFDIVMSNVSRLCHEKAMVTVNGSYPGPTIYAREGDRVIVNVTNHVKHNMTIHWHGLKQRRNGWADGPAYVTQCPIGSGGSYVYDFNVTRQRGTLWWHAHIAWMRAT-VHGAIVILPAAGVPYPFPKPDDEAEIVLGEWWHADVETVERQGSMLGMAPNMSDAHTINGK 199
BLAST of FC920427 vs. ExPASy Swiss-Prot
Match: LAC1_PHLRA (Laccase OS=Phlebia radiata GN=LAC PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13 Identity = 49/172 (28.49%), Postives = 73/172 (42.44%), Query Frame = 3 Query: 171 VTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGIKQRKNSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQG 665 + + +SP G ++ +L G FPGP + DN +NVI++L +L W+G Q +W DG N CPI ++ Y FQ DQ G+++Y G G D D T++ + DW+ T ++ G P D LING G Sbjct: 31 IVNAAVSPDGFSRQAVLAEGVFPGPLIAGNKGDNFQINVIDELTNATMLKTTTIHWHGFFQHGTNWADGPAFINQCPIASGDSFLYNFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPADPYLDQYDVDDDSTVITLADWYHTAARL-------GSPFPAADTTLINGLG 195 The following BLAST results are available for this feature:
BLAST of FC920427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920427 ID=FC920427; Name=FC920427; organism=Citrus clementina; type=EST; length=705bpback to top |