FC920431

Overview
NameFC920431
Unique NameFC920431
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920431 vs. ExPASy Swiss-Prot
Match: SAHH_PIG (Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 2.787e-35
Identity = 75/135 (55.56%), Postives = 92/135 (68.15%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+S A +GR  ++LAE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQDH              WKGET +EY WC E+ L +   G  ++I+DDGGD T L+H
Sbjct:    7 YKVADISLAAWGRKALDLAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPLNMILDDGGDLTNLVH 140          
BLAST of FC920431 vs. ExPASy Swiss-Prot
Match: SAHH_BOVIN (Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 2.787e-35
Identity = 76/135 (56.30%), Postives = 92/135 (68.15%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+S A +GR  ++LAE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQDH              WKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADISLAAWGRKALDLAENEMPGLMHMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPLNMILDDGGDLTNLIH 140          
BLAST of FC920431 vs. ExPASy Swiss-Prot
Match: SAHH_BDEBA (Adenosylhomocysteinase OS=Bdellovibrio bacteriovorus GN=ahcY PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 4.753e-35
Identity = 85/173 (49.13%), Postives = 100/173 (57.80%), Query Frame = 1
Query:  190 ADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKAL-DWGPGGGPDLIVDDGGDATLLIHE-------------------GVKAEEIYEKTGKLPDPASTDNAEV 648
            A +GR EI++AE EMPGLMA R E+   QP KGA+I G LHMTIQTAVLIETL  LGAE+RW SCNIFSTQDH              WKG T QE+ WC E+ +  WG  G  ++I+DDGGD T ++HE                   GV   E+  K GKL  PA   N  V
Sbjct:   41 AKWGREEIKIAETEMPGLMALRKEYKKQQPLKGARIAGCLHMTIQTAVLIETLVELGAEIRWSSCNIFSTQDHAAAAIAAAGIPVFAWKGLTEQEFNWCIEQTIVGWGKEGF-NMILDDGGDLTNMMHEPRFAKEMKKIIGISEETTTGVHNLEVLVKQGKLKVPAININDSV 212          
BLAST of FC920431 vs. ExPASy Swiss-Prot
Match: SAHH_RAT (Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 8.108e-35
Identity = 74/135 (54.81%), Postives = 91/135 (67.41%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+  A +GR  +++AE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQDH              WKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHF-KDGPLNMILDDGGDLTNLIH 140          
BLAST of FC920431 vs. ExPASy Swiss-Prot
Match: SAHH_MOUSE (Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 8.108e-35
Identity = 74/135 (54.81%), Postives = 91/135 (67.41%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+  A +GR  +++AE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL ALGAEVRW SCNIFSTQDH              WKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETDEEYLWCIEQTLHF-KDGPLNMILDDGGDLTNLIH 140          
BLAST of FC920431 vs. ExPASy Swiss-Prot
Match: SAHH_MACFA (Adenosylhomocysteinase OS=Macaca fascicularis GN=AHCY PE=2 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.059e-34
Identity = 73/135 (54.07%), Postives = 92/135 (68.15%), Query Frame = 1
Query:  166 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 570
            +KV D+  A +GR  +++AE EMPGLM  R ++  S+P KGA+I G LHMT++TAVLIETL ALGAEV+W SCNIFSTQDH              WKGET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMREQYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPLNMILDDGGDLTNLIH 140          
BLAST of FC920431 vs. ExPASy Swiss-Prot
Match: SAHH_PSEFS (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain SBW25) GN=ahcY PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34
Identity = 77/147 (52.38%), Postives = 93/147 (63.27%), Query Frame = 1
Query:  136 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            +V   A   ++KV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD               WKGET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:    3 AVNTPADFNDYKVADMSLAAWGRRETFIAESEMPALMGLRRKYAAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCLEQTILKDGAPWDANMILDDGGDLTELLHK 149          
BLAST of FC920431 vs. ExPASy Swiss-Prot
Match: SAHH_PSE14 (Adenosylhomocysteinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34
Identity = 76/142 (53.52%), Postives = 92/142 (64.79%), Query Frame = 1
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            A   ++KV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD               WKGET +EY WC E+  L  G     ++I+DDGGD T++IH+
Sbjct:    8 AEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTVIIHK 149          
BLAST of FC920431 vs. ExPASy Swiss-Prot
Match: SAHH_HAHCH (Adenosylhomocysteinase OS=Hahella chejuensis (strain KCTC 2396) GN=ahcY PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.806e-34
Identity = 72/137 (52.55%), Postives = 92/137 (67.15%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW-GPGGGPDLIVDDGGDATLLIH 570
            ++KVKD+S A +GR EI++AE EMP LM  R ++   QP  GA+I G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQDH              WKGET +EY WC ++ +   G     ++++DDGGD T ++H
Sbjct:   12 DYKVKDISLAAWGRKEIDIAEGEMPALMTLREKYRAQQPLAGARILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAAAGVPVFAWKGETEEEYVWCIKQTITKDGQPWNANMVLDDGGDLTEILH 148          
BLAST of FC920431 vs. ExPASy Swiss-Prot
Match: SAHH_PSEPW (Adenosylhomocysteinase OS=Pseudomonas putida (strain W619) GN=ahcY PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.081e-34
Identity = 78/147 (53.06%), Postives = 93/147 (63.27%), Query Frame = 1
Query:  136 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 573
            +V   A   +FKV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD               WKGET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:    3 AVNTPAGFTDFKVADISLAAWGRRETIIAESEMPALMGLRRKYLAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCLEQTILKDGQPWDANMILDDGGDLTELLHK 149          
The following BLAST results are available for this feature:
BLAST of FC920431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_PIG2.787e-3555.56Adenosylhomocysteinase OS=Sus scrofa GN=AHCY PE=3 ... [more]
SAHH_BOVIN2.787e-3556.30Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 ... [more]
SAHH_BDEBA4.753e-3549.13Adenosylhomocysteinase OS=Bdellovibrio bacteriovor... [more]
SAHH_RAT8.108e-3554.81Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahc... [more]
SAHH_MOUSE8.108e-3554.81Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=... [more]
SAHH_MACFA1.059e-3454.07Adenosylhomocysteinase OS=Macaca fascicularis GN=A... [more]
SAHH_PSEFS1.806e-3452.38Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_PSE141.806e-3453.52Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_HAHCH1.806e-3452.55Adenosylhomocysteinase OS=Hahella chejuensis (stra... [more]
SAHH_PSEPW3.081e-3453.06Adenosylhomocysteinase OS=Pseudomonas putida (stra... [more]

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Properties
Property NameValue
Genbank descriptionC32008C10EF RVDevelop1 Citrus clementina cDNA clone C32008C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920431 ID=FC920431; Name=FC920431; organism=Citrus clementina; type=EST; length=689bp
GGGTAACCCACTCTCTCTCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTAGTTTCCAAAGAGAGAGTAGATTGCCCTCTCTTCCTTCTTTCTTTT
AGATCTATCAATTCTATTAATCAACCATGGCTTTGTCCGTCGAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCTTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACGGCCGTCCTCATCGAGACACTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTACGAG
AAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAAGTTCA
GATTGTTTTGACTATCATTAGAGATGGGTTGAAGGCCGA
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