FC920449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920449 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.176e-31 Identity = 68/189 (35.98%), Postives = 108/189 (57.14%), Query Frame = 3 Query: 168 SSAKFDDLYQTSWAFNHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGP---NHNEFDFEFLGNTTGEPYLVQTNVYVNGVGN--REQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGERVKTDWSH 719 S ++ + + +++Q +G KL LD SGAG SK+KY +G S ++KL G ++G V AFY+S+ +H+E D E LG + + + +QTNVY NG RE++ WFDPT+ FH Y+L+WN VFLVD P+R N +P + M +Y ++W+ +WAT+G + ++ + Sbjct: 39 SKIAIENGFSRRFGAHNIQVNGSLAKLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYP-SKPMSLYVTVWDGSEWATKGGKYPVNYKY 226
BLAST of FC920449 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.134e-29 Identity = 63/143 (44.06%), Postives = 92/143 (64.34%), Query Frame = 3 Query: 240 LKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWN 668 L+L LD SG+GF S+ Y G +++IK S G +T+FY+ S H+E F+ LG G PYL+ TN+Y+ G G ++QR LWFDPTK++H+YS LWN Q+VF VD+TPIRV++ ++ + +P Q M + S+ N Sbjct: 45 LQLTLDKNSGSGFESQLIYGSGYFNVRIKAPQTTSTGVITSFYLISRSSRHDELCFQILGKN-GPPYLLNTNMYLYGEGGKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRVYS--KNPDVYYPSVQTMFLMGSVQN 184
BLAST of FC920449 vs. ExPASy Swiss-Prot
Match: GUB_ORPSP (Beta-glucanase OS=Orpinomyces sp. (strain PC-2) GN=licA PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.217e-13 Identity = 51/175 (29.14%), Postives = 83/175 (47.43%), Query Frame = 3 Query: 186 DLYQTSWAFNHVQYDGDTLKLNLDN----YSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYM---SSDGPNHNEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWN---ADDW 680 +++ W N+ +++ LKL +D Y+ + +K+ Y +G + +K + + G V++F+ SDG +E D EFLG T + VQ N Y NG G+ E L FD ++ FHTY W + + + VD T + + IP D + + WN DDW Sbjct: 59 EMFNCRWTPNNDKFENGKLKLTIDRDGSGYTCGEYRTKNYYGYGMFQVNMKPI--KNPGVVSSFFTYTGPSDGTKWDEIDIEFLGYDTTK---VQFNYYTNGQGHHEHIHYLGFDASQGFHTYGFFWARNSITWYVDGTAVYT----AYDNIP---DTPGKIMMNAWNGIGVDDW 221
BLAST of FC920449 vs. ExPASy Swiss-Prot
Match: GUB_PAEMA (Beta-glucanase OS=Paenibacillus macerans PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11 Identity = 53/177 (29.94%), Postives = 82/177 (46.33%), Query Frame = 3 Query: 189 LYQTSWAFNHVQYDGD-TLKLNL-----DNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNH----NEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVDETPIRVHTNLEHKGIPFPKDQAMGVYSSIWN---ADDW 680 ++ +W N+V + D LKL L + + A + S + Y +G + +K + G V++F+ + GP H +E D EFLG T + VQ N Y NGVG E+ + L FD +K FHTY+ W + + VD L+H + ++WN DDW Sbjct: 52 VFNCTWRANNVNFTNDGKLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMK--PAKNTGIVSSFFTYT-GPAHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGV-------LKHTATANIPSTPGKIMMNLWNGTGVDDW 215
BLAST of FC920449 vs. ExPASy Swiss-Prot
Match: GUB_PAEPO (Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 44/139 (31.65%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 189 LYQTSWAFNHVQYDGD-TLKLNL-----DNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNH----NEFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVD 575 ++ +W N+V + D LKL+L + + + S + Y +G + +K + G V++F+ + GP+H +E D EFLG T + VQ N Y NGVG E+ ++L FD + FHTY+ W + + VD Sbjct: 53 MFNCTWRANNVNFTNDGKLKLSLTSPANNKFDCGEYRSTNNYGYGLYEVSMK--PAKNTGIVSSFFTYT-GPSHGTQWDEIDIEFLGKDTTK---VQFNYYTNGVGGHEKIINLGFDASTSFHTYAFDWQPGYIKWYVD 185
BLAST of FC920449 vs. ExPASy Swiss-Prot
Match: GUB_CLOTH (Beta-glucanase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=licB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 44/138 (31.88%), Postives = 66/138 (47.83%), Query Frame = 3 Query: 189 LYQTSWAFNHVQYDGDTLKLNLDNYSGAGFASKS-----KYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHN----EFDFEFLGNTTGEPYLVQTNVYVNGVGNREQRLDLWFDPTKEFHTYSLLWNQRQVVFLVD 575 ++ W + V + + L LD G + KS K FG ++++ + G V++F+ + GP+ N E D EFLG T + VQ N Y NGVG E +L FD +++FHTY W + F VD Sbjct: 59 VFNCVWKPSQVTFSNGKMILTLDREYGGSYPYKSGEYRTKSFFGYGYYEVRMKAAKNVGIVSSFFTYT-GPSDNNPWDEIDIEFLGKDTTK---VQFNWYKNGVGGNEYLHNLGFDASQDFHTYGFEWRPDYIDFYVD 192 The following BLAST results are available for this feature:
BLAST of FC920449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920449 ID=FC920449; Name=FC920449; organism=Citrus clementina; type=EST; length=719bpback to top |