FC920450

Overview
NameFC920450
Unique NameFC920450
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10223 contig Ccv1_Contig10223:1..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_DESAA (Catalase-peroxidase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=katG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.873e-14
Identity = 72/244 (29.51%), Postives = 96/244 (39.34%), Query Frame = 2
Query:  200 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE-----------------------------------GRL---PDAKQGN-------DHLRQVFGAQMGLSDKDIVAL-SGGHTLXRCHKE-----------------------------------RSGFEGPWTPHPLIFDNSYFTEL 682
            PL +R+AWHSAGTY +    GG   G+ RLA   +   N  LD A RLL P K+++   IS+ADL  LAG   +E  G P   F  GR+D  EP Q+                                   G +   P+   GN         +R+ F A+M ++D++ VAL +GGHT  +CH                                      SG EG W P P  +D  Y   L
Sbjct:   89 PLFIRMAWHSAGTYRMGDGRGGAGSGSQRLAPLNSWPDNVNLDKARRLLWPIKQKYGKRISWADLMVLAGNCAIESMGLPTFGFAGGREDVWEPEQDVYWGSEEEWLATSDKPKSRYSGERDLENPLAAVQMGLIYVNPEGPDGNPDPIASGKDVRETF-ARMAMNDEETVALVAGGHTFGKCHGAGDAALVGPEPEAAPLEEMGLGWKSSHGRGKGGDTISSGIEGAWKPRPTTWDMGYLKVL 331          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_SYMTH (Catalase-peroxidase OS=Symbiobacterium thermophilum GN=katG PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.513e-13
Identity = 60/179 (33.52%), Postives = 83/179 (46.37%), Query Frame = 2
Query:  200 PLMLRIAWHSAGTYDVKTKTGG-PFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE----------------------------------------GRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLXRCH 607
            PL++R+AWHSAGTY ++   GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR D  EP ++                                        GR PD  +    +R+ F  +MG++D++ VAL +GGHT  + H
Sbjct:   81 PLIIRMAWHSAGTYRIQDGRGGAESGAQRFAPLNSWPDNINLDKARRLLWPIKQKYGRRISWADLMILAGNVALESMGLKTIGFAGGRADVWEPEEDIYWGSEQQWLGRDRFGEEGKLEDPLAASEMGLIYVNPEGPGREPDPLKAAQQIRETF-KRMGMNDEETVALIAGGHTFGKTH 258          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_SPHAL (Catalase-peroxidase OS=Sphingopyxis alaskensis GN=katG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13
Identity = 61/186 (32.80%), Postives = 83/186 (44.62%), Query Frame = 2
Query:  200 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ----------------------------EGRL-----------PDAKQGNDH--------LRQVFGAQMGLSDKDIVAL-SGGHTLXRCH 607
            P  +R+AWH+AGTY      GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG V +E  GGP   F  GR D  EP +                            EG L           P+  QGN H        +++ F  +M ++D++ VAL +GGHT  + H
Sbjct:   91 PFFIRMAWHAAGTYRTADGRGGANSGQQRFAPLDSWPDNGNLDKARRLLWPIKQKYGNKISWADLFILAGNVAIESMGGPVFGFGGGRVDVYEPERDIYWGSEDKWVNQGVQTRIDPAKGMETIEGPLAAIQMGLIYVNPEGPQGNPHDDEGMARDMKETF-KRMAMNDEETVALTAGGHTFGKAH 275          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_ACIBL (Catalase-peroxidase OS=Acidobacteria bacterium (strain Ellin345) GN=katG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13
Identity = 72/239 (30.13%), Postives = 95/239 (39.75%), Query Frame = 2
Query:  200 PLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ------EGRLPDAKQ--GNDHLRQVFGA-QMGL------------------------------SDKDIVAL-SGGHTLXRCHKE------------------------------------RSGFEGPWTPHPLIFDNSYFTEL 682
            P  +R+AWHSAGTY +    GG   G  R A   +   N  LD A RLL P K+++   +S+ADL  LAG V +E  G     F  GR+D  EP +      EG+  D K+  G   L    GA QMGL                              +D++ VAL +GGHT  + H                                       SG EG WT +P+ +DN +F  L
Sbjct:  104 PFFIRMAWHSAGTYRIGDGRGGAGSGEQRFAPLNSWPDNGNLDKARRLLWPIKQKYGRKLSWADLMVLAGNVALESMGFKTFGFAGGREDVWEPSEDIYWGPEGKWLDDKRYSGERDLENPLGAVQMGLIYVNPEGPNGKPDPAAAAVDIRETFARMAMNDEETVALIAGGHTFGKTHGAGVPTEYVGPEPEGAGIEEQGLGWKNKLGHGHGYHTITSGLEGAWTTNPIKWDNGFFDNL 342          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_SYNPW (Catalase-peroxidase OS=Synechococcus sp. (strain WH7803) GN=katG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.810e-13
Identity = 69/242 (28.51%), Postives = 93/242 (38.43%), Query Frame = 2
Query:  203 LMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE------------------GRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLXRCHKE-----------------------------------RSGFEGPWTPHPLIFDNSYFTELLTGE 694
            L +R+AWHSAGTY      GG   G  R A   +   N  LD A RLL P K ++   IS+ADL  L+G V +E  G     F  GR+D  +P ++                  G L                      PD       +R+ F A+MG++ ++ VAL +GGHT  +CH                                      SG EG W P+P  +D  YF  + T E
Sbjct:   89 LFIRLAWHSAGTYRTGDGRGGAGHGNQRFAPLNSWPDNTNLDKARRLLWPIKRKYGNAISWADLIILSGNVALESMGFRTFGFAGGREDIWQPEEDVFWGKETGWLKDERRNDKGELNQPLAAVEMGLIYVNPEGPHGEPDPVASGRDVRETF-ARMGMTVEETVALVAGGHTFGKCHGAAPDSHLEAEPEGAALHEQGLGWRNTYESGKGEHTITSGIEGAWKPNPTRWDQGYFQMMFTYE 329          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_COLP3 (Catalase-peroxidase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=katG PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 70/240 (29.17%), Postives = 96/240 (40.00%), Query Frame = 2
Query:  200 PLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEP-----------------PQEGRL----------------------PDAKQGNDHLRQVFGAQMGLSDKDIVA-LSGGHTLXRCHKER------------------------------------SGFEGPWTPHPLIFDNSYFTELL 685
            PLM+R+AWHSAG Y V    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL  L+G V +E  G     F  GR D  EP                  ++G+L                      PD     + +R  FG +M ++D++IVA L+GGHTL + H  +                                    SG EG WT  P  + ++Y   L+
Sbjct:   99 PLMIRMAWHSAGVYRVHDGRGGASGGQQRFAPLNSWPDNVNLDKARRLLWPVKQKYGRKISWADLMVLSGNVALESMGFKTFGFAGGRTDDWEPDLVYWGPETAMLSDKRRDKKGKLKGPLAAVEMGLIYVNPEGPHGKPDPLLAANDIRMSFG-RMAMNDEEIVALLAGGHTLGKAHGAKKPNGCVGAEPAAADIEAQGLGWKNKCGTGVGADTISSGLEGAWTVTPTQWSSNYLDNLM 337          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPN (Catalase-peroxidase 2 OS=Legionella pneumophila GN=katG2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 60/191 (31.41%), Postives = 85/191 (44.50%), Query Frame = 2
Query:  191 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLXRCHKERSG-FEGP 634
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH   + H   SG + GP
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASGKYLGP 286          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPL (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Lens) GN=katG2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 60/191 (31.41%), Postives = 85/191 (44.50%), Query Frame = 2
Query:  191 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLXRCHKERSG-FEGP 634
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH   + H   SG + GP
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGTEGKWLESKRQDKVGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASGKYLGP 286          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPH (Catalase-peroxidase 2 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=katG2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 60/191 (31.41%), Postives = 85/191 (44.50%), Query Frame = 2
Query:  191 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLXRCHKERSG-FEGP 634
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH   + H   SG + GP
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASGKYLGP 286          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPC (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Corby) GN=katG2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 60/191 (31.41%), Postives = 85/191 (44.50%), Query Frame = 2
Query:  191 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLXRCHKERSG-FEGP 634
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH   + H   SG + GP
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASGKYLGP 286          
The following BLAST results are available for this feature:
BLAST of FC920450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
KATG_DESAA8.873e-1429.51Catalase-peroxidase OS=Desulfatibacillum alkenivor... [more]
KATG_SYMTH1.513e-1333.52Catalase-peroxidase OS=Symbiobacterium thermophilu... [more]
KATG_SPHAL4.404e-1332.80Catalase-peroxidase OS=Sphingopyxis alaskensis GN=... [more]
KATG_ACIBL4.404e-1330.13Catalase-peroxidase OS=Acidobacteria bacterium (st... [more]
KATG_SYNPW9.810e-1328.51Catalase-peroxidase OS=Synechococcus sp. (strain W... [more]
KATG_COLP31.673e-1229.17Catalase-peroxidase OS=Colwellia psychrerythraea (... [more]
KATG2_LEGPN1.673e-1231.41Catalase-peroxidase 2 OS=Legionella pneumophila GN... [more]
KATG2_LEGPL1.673e-1231.41Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]
KATG2_LEGPH1.673e-1231.41Catalase-peroxidase 2 OS=Legionella pneumophila su... [more]
KATG2_LEGPC1.673e-1231.41Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]

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Properties
Property NameValue
Genbank descriptionC32008E11EF RVDevelop1 Citrus clementina cDNA clone C32008E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920450 ID=FC920450; Name=FC920450; organism=Citrus clementina; type=EST; length=737bp
GGTGCTCTGCTCGTGCCACTCTCCTTTGTTAAGGATTTGCGTCTCTCTTT
CTTATTTCATTCAGCGGTCAGTGACGTTAACAGATCTGTTCCTTGAAAAG
ATGACGAAGAATTACCCCACTGTTAGCGAGGATTACAAGAAGGCCGTGGA
GAAATGCAAGAGGAAGCTCAGAGGCTTCATCGCTGAGAAGAACTGCGCTC
CACTCATGCTCCGTATCGCGTGGCACTCAGCTGGTACATATGATGTGAAG
ACCAAGACCGGAGGTCCATTCGGAACCATGAGGCTCGCTGCTGAGCAGGC
ACACTCAGCCAACAACGGCCTCGATATTGCCGTTAGGCTTTTGGAGCCGT
TCAAGGAGCAGTTCCCTACCATCTCCTACGCTGACCTTTATCAGCTTGCT
GGTGTTGTTGGCGTTGAGGTTACCGGTGGGCCCGATATCCCCTTCCACCC
TGGAAGAGATGACAAGGCTGAGCCACCTCAAGAAGGCCGGCTTCCTGATG
CTAAACAGGGTAATGATCACTTGAGGCAAGTCTTTGGTGCTCAGATGGGC
CTCAGCGACAAGGATATTGTTGCTCTCTCTGGTGGCCACACCCTGNGAAG
GTGCCACAAGGAGAGGTCTGGATTTGAGGGACCATGGACCCCGCACCCTC
TCATTTTTGACAATTCCTACTTCACGGAGCTCTTGACTGGTGAGAAGGAT
GGTCTTCTGCAATTGCCATCCCGACAGGCCCTTCTGG
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