FC920450

Overview
NameFC920450
Unique NameFC920450
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10223 contig Ccv1_Contig10223:1..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPA (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Paris) GN=katG2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 60/191 (31.41%), Postives = 85/191 (44.50%), Query Frame = 2
Query:  191 NCAPLMLRIAWHSAGTYDVKTKTGGP-FGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAE---------------------------------------PPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLXRCHKERSG-FEGP 634
            N  PL +R++WH+AGTY +    GG   G  R A + +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G   I F  GR+D  E                                       P     +PD     + +R+ FG +M ++D++ VAL +GGH   + H   SG + GP
Sbjct:   97 NYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFG-RMAMNDEETVALIAGGHAFGKTHGAASGKYLGP 286          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_MARMS (Catalase-peroxidase OS=Marinomonas sp. (strain MWYL1) GN=katG PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12
Identity = 69/240 (28.75%), Postives = 90/240 (37.50%), Query Frame = 2
Query:  200 PLMLRIAWHSAGTYDVKTKTGG-PFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQ-----------------------------------------EGRLPDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLXRCHKE-----------------------------------RSGFEGPWTPHPLIFDNSYFTEL 682
            P  +R+AWHSAGTY      GG   GT R A   +   N  LD A RLL P K+++   IS+ADL  LAG   +E  G     F  GR D  +P +                                         EG+ PD       +R  FG +M ++D++ VAL +GGHT  + H                                      SG EG WT  P+ +DN YF  L
Sbjct:   96 PFFIRMAWHSAGTYRTADGRGGATSGTQRFAPLNSWPDNVNLDKARRLLWPIKQKYGRKISWADLMILAGNCALESMGFKTFGFAGGRVDVWQPEEDIYWGTEKTWLDDERYTGDRELENPLAAVQMGLIYVNPEGPEGK-PDTLASARDIRDTFG-RMAMNDEETVALIAGGHTFGKAHGAGDAAQVGADPEAAGIAEQGFGWSNSMGTGKGVDTISSGLEGAWTKSPIAWDNGYFENL 333          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_ENT38 (Catalase-peroxidase OS=Enterobacter sp. (strain 638) GN=katG PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12
Identity = 60/176 (34.09%), Postives = 78/176 (44.32%), Query Frame = 2
Query:  203 LMLRIAWHSAGTY-DVKTKTGGPFGTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLXRCH 607
            L +R+AWH AGTY  V  + G   G  R A   A   N  LD A RLL P K+++   IS+ADLY LAG V +E +G     F  GR+D  EP  +    D K    H                                      +R  FG  MG++D++ VAL +GGHTL + H
Sbjct:   99 LFIRMAWHGAGTYRSVDGRGGAGRGQQRFAPLNAWPDNVSLDKARRLLWPIKQKYGQKISWADLYILAGNVALENSGFRTFGFGAGREDVWEPDMDVNWGDEKAWLTHRDPESLAKRPLAATEMGLIYVNPEGPNASGEPLSAAAAIRATFG-NMGMNDEETVALIAGGHTLGKTH 273          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: PEM1_PHACH (Manganese peroxidase 1 OS=Phanerochaete chrysosporium GN=MNP1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.869e-12
Identity = 49/146 (33.56%), Postives = 73/146 (50.00%), Query Frame = 2
Query:  260 GGPFGTMRL--AAEQAHSANNGLDIAVRLLEPFKEQFPTISYADLYQLAGVVGV-EVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLXRCHK-ERSGFEGPWTPHPLIFDNSYFTELL 685
            GG  G+M L    E   SANNG+D +V  L PF ++  TIS ADL Q AG V +    G P + F  GR +K     +G +P+ +     + Q F    G +  ++V+L   H++ R  K +++    P+   P  FD   F E+L
Sbjct:   82 GGADGSMLLFPTVEPNFSANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAVDGLIPEPQDSVTKILQRFEDAGGFTPFEVVSLLASHSVARADKVDQTIDAAPFDSTPFTFDTQVFLEVL 227          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_SALRD (Catalase-peroxidase OS=Salinibacter ruber (strain DSM 13855) GN=katG PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.869e-12
Identity = 69/243 (28.40%), Postives = 93/243 (38.27%), Query Frame = 2
Query:  200 PLMLRIAWHSAGTYDVKTKTGGPFG-TMRLAAEQAHSANNGLDIAVRLLEPFKEQFPT-ISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQE------------GRL----------------------------PDAKQGNDHLRQVFGAQMGLSDKDIVAL-SGGHTLXRCHKE-----------------------------------RSGFEGPWTPHPLIFDNSYFTELLTGE 694
            PL +R++WH+AGTY      GG  G   RLA   +   N  LD A RLL P K+++   IS+ADL  LAG V +E  G     F  GR+D  +P +             GR                             PD +     +R+ FG +M ++D++  AL +GGHT  + H                                      SG EGPWT  P  +D  Y   LL  E
Sbjct:   84 PLFIRMSWHAAGTYRTTDGRGGSSGGRQRLAPLNSWPDNANLDKARRLLWPVKQKYGRKISWADLLVLAGNVAMESMGFETFGFAGGREDDFKPDESIDWGPEDEMETWGRFNEEDELDNPLGATVMGLIYVNPEGPESTPDPEWSAQRIRKSFG-RMAMNDRETAALIAGGHTFGKVHGADTDEHLQAEPEAAPIEQQGLGWHNEHGSGKGGDTITSGIEGPWTDAPTEWDMGYLDFLLDYE 325          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_ACIBY (Catalase-peroxidase OS=Acinetobacter baumannii (strain AYE) GN=katG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.359e-12
Identity = 58/180 (32.22%), Postives = 80/180 (44.44%), Query Frame = 2
Query:  191 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLXRCH 607
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTL + H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_ACIBT (Catalase-peroxidase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=katG PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.359e-12
Identity = 58/180 (32.22%), Postives = 80/180 (44.44%), Query Frame = 2
Query:  191 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLXRCH 607
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTL + H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_ACIBC (Catalase-peroxidase OS=Acinetobacter baumannii (strain ACICU) GN=katG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.359e-12
Identity = 58/180 (32.22%), Postives = 80/180 (44.44%), Query Frame = 2
Query:  191 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLXRCH 607
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTL + H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_ACIB5 (Catalase-peroxidase OS=Acinetobacter baumannii (strain AB0057) GN=katG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.359e-12
Identity = 58/180 (32.22%), Postives = 80/180 (44.44%), Query Frame = 2
Query:  191 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLXRCH 607
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTL + H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
BLAST of FC920450 vs. ExPASy Swiss-Prot
Match: KATG_ACIB3 (Catalase-peroxidase OS=Acinetobacter baumannii (strain AB307-0294) GN=katG PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.359e-12
Identity = 58/180 (32.22%), Postives = 80/180 (44.44%), Query Frame = 2
Query:  191 NCAPLMLRIAWHSAGTYDVKTKTGGPF-GTMRLAAEQAHSANNGLDIAVRLLEPFKEQF-PTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDH--------------------------------------LRQVFGAQMGLSDKDIVAL-SGGHTLXRCH 607
            N   L +R+AWH+AGTY +    GG   G  R A   +   N  LD A RLL P K+++   IS+ADL+ LAG + +E +G     F  GR+D  EP  +    D K+   H                                      +R  FG  M + D++IVAL +GGHTL + H
Sbjct:   88 NYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRFAPLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGREDVWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRATFG-NMAMDDEEIVALIAGGHTLGKTH 266          
The following BLAST results are available for this feature:
BLAST of FC920450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
KATG2_LEGPA1.673e-1231.41Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]
KATG_MARMS2.185e-1228.75Catalase-peroxidase OS=Marinomonas sp. (strain MWY... [more]
KATG_ENT382.185e-1234.09Catalase-peroxidase OS=Enterobacter sp. (strain 63... [more]
PEM1_PHACH4.869e-1233.56Manganese peroxidase 1 OS=Phanerochaete chrysospor... [more]
KATG_SALRD4.869e-1228.40Catalase-peroxidase OS=Salinibacter ruber (strain ... [more]
KATG_ACIBY6.359e-1232.22Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIBT6.359e-1232.22Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIBC6.359e-1232.22Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIB56.359e-1232.22Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]
KATG_ACIB36.359e-1232.22Catalase-peroxidase OS=Acinetobacter baumannii (st... [more]

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Properties
Property NameValue
Genbank descriptionC32008E11EF RVDevelop1 Citrus clementina cDNA clone C32008E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920450 ID=FC920450; Name=FC920450; organism=Citrus clementina; type=EST; length=737bp
GGTGCTCTGCTCGTGCCACTCTCCTTTGTTAAGGATTTGCGTCTCTCTTT
CTTATTTCATTCAGCGGTCAGTGACGTTAACAGATCTGTTCCTTGAAAAG
ATGACGAAGAATTACCCCACTGTTAGCGAGGATTACAAGAAGGCCGTGGA
GAAATGCAAGAGGAAGCTCAGAGGCTTCATCGCTGAGAAGAACTGCGCTC
CACTCATGCTCCGTATCGCGTGGCACTCAGCTGGTACATATGATGTGAAG
ACCAAGACCGGAGGTCCATTCGGAACCATGAGGCTCGCTGCTGAGCAGGC
ACACTCAGCCAACAACGGCCTCGATATTGCCGTTAGGCTTTTGGAGCCGT
TCAAGGAGCAGTTCCCTACCATCTCCTACGCTGACCTTTATCAGCTTGCT
GGTGTTGTTGGCGTTGAGGTTACCGGTGGGCCCGATATCCCCTTCCACCC
TGGAAGAGATGACAAGGCTGAGCCACCTCAAGAAGGCCGGCTTCCTGATG
CTAAACAGGGTAATGATCACTTGAGGCAAGTCTTTGGTGCTCAGATGGGC
CTCAGCGACAAGGATATTGTTGCTCTCTCTGGTGGCCACACCCTGNGAAG
GTGCCACAAGGAGAGGTCTGGATTTGAGGGACCATGGACCCCGCACCCTC
TCATTTTTGACAATTCCTACTTCACGGAGCTCTTGACTGGTGAGAAGGAT
GGTCTTCTGCAATTGCCATCCCGACAGGCCCTTCTGG
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