FC920456

Overview
NameFC920456
Unique NameFC920456
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: LIS1A_DANRE (Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 1
Query:  163 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 693
            +IV+AS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W       Y ++    H EWV  VR  PN     I S+S D+TV+VW ++  + +A L  H   V  ++ +P+ +
Sbjct:  122 VIVSASEDATIKVW-----DHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--ATGYCVKTFTGHREWVRMVR--PNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESA 289          

HSP 2 Score: 96.2857 bits (238), Expect = 1.698e-19
Identity = 63/215 (29.30%), Postives = 101/215 (46.98%), Query Frame = 1
Query:  103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSA------------------SWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690
            T++ HTD V  I+       ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++A G   + F GH + V  V  + D   I S+S D+T+++W     ECK  ++E   H   V C+ ++P +  PTI+ A                  S D+T+K+W++S      TL GH  +V  V V P G
Sbjct:  145 TLKGHTDSVQDISFD-HTGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGG 350          

HSP 3 Score: 80.8777 bits (198), Expect = 7.382e-15
Identity = 60/211 (28.44%), Postives = 100/211 (47.39%), Query Frame = 1
Query:  103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQ--------------------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 672
            TM  H   V+++A  + N D IV+ASRDK+I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  +       H   V  ++++ ++                      ++S SRD+TIK+W+ ++G C  T+     H  WV  V   P      IVS + D+T+++W+  N +   TL+ H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLV---GHDNWVRGVLVHPGGKY--IVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSL 386          

HSP 4 Score: 78.5666 bits (192), Expect = 3.664e-14
Identity = 52/150 (34.67%), Postives = 72/150 (48.00%), Query Frame = 1
Query:  250 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W ++      T  GH  +V  V  + DG+L
Sbjct:  104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTL 248          

HSP 5 Score: 71.633 bits (174), Expect = 4.479e-12
Identity = 54/207 (26.09%), Postives = 96/207 (46.38%), Query Frame = 1
Query:   52 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 609
            + T  + ++A G  +K T   H + V  +  P  +  +I ++S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V      + IVS + D+T+++W+   + C  T+    AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  213 DKTIKMWEVATGYCVK-TFTGHREWVRMVR-PNQDGTLIASSSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTL---SAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: LIS1_PIG (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus scrofa GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20
Identity = 62/177 (35.03%), Postives = 91/177 (51.41%), Query Frame = 1
Query:  163 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 693
            ++V+AS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSA+RD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + +A L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289          

HSP 2 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 59/216 (27.31%), Postives = 99/216 (45.83%), Query Frame = 1
Query:  103 TMRAHTDMVTAIATPIDNSD-MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690
            T++ HTD V  I+   D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S + D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +                    P ++S S D+T+K+W++S      TL GH  +V  V     G
Sbjct:  145 TLKGHTDSVQDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350          

HSP 3 Score: 78.1814 bits (191), Expect = 4.785e-14
Identity = 51/150 (34.00%), Postives = 71/150 (47.33%), Query Frame = 1
Query:  250 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSA+ D+T+K+W +       T  GH  +V  V  + DG+L
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248          

HSP 4 Score: 74.7146 bits (182), Expect = 5.290e-13
Identity = 64/211 (30.33%), Postives = 98/211 (46.45%), Query Frame = 1
Query:  103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 672
            TM  H   V+++A  + N D IV+A+RDK+I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  E K+  R   H  + +S A       I                  +S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSAARDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386          

HSP 5 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 53/207 (25.60%), Postives = 96/207 (46.38%), Query Frame = 1
Query:   52 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 609
            + T  + ++  G  +K T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  213 DKTIKMWEVQTGYCVK-TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: LIS1_BOVIN (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos taurus GN=PAFAH1B1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20
Identity = 62/177 (35.03%), Postives = 91/177 (51.41%), Query Frame = 1
Query:  163 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 693
            ++V+AS D +I VW     +   G   R L GH+  V+D+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + +A L  H   V  ++ +P+ S
Sbjct:  122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289          

HSP 2 Score: 86.6557 bits (213), Expect = 1.345e-16
Identity = 60/216 (27.78%), Postives = 99/216 (45.83%), Query Frame = 1
Query:  103 TMRAHTDMVTAIATPIDNSD-MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690
            T++ HTD V  I+   D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +                    P ++S S D+T+K+W++S      TL GH  +V  V     G
Sbjct:  145 TLKGHTDSVEDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350          

HSP 3 Score: 78.9518 bits (193), Expect = 2.805e-14
Identity = 52/150 (34.67%), Postives = 71/150 (47.33%), Query Frame = 1
Query:  250 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696
            L+GH   V  V+        +S S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W +       T  GH  +V  V  + DG+L
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248          

HSP 4 Score: 75.8702 bits (185), Expect = 2.375e-13
Identity = 65/211 (30.81%), Postives = 98/211 (46.45%), Query Frame = 1
Query:  103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 672
            TM  H   V+++A  + N D IV+ASRDK+I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  E K+  R   H  + +S A       I                  +S SRD+TIK+W+ + G C  T+     H  WV  V F        I+S + D+T++VW+  N +   TL  H  +V ++
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386          

HSP 5 Score: 71.2478 bits (173), Expect = 5.849e-12
Identity = 53/207 (25.60%), Postives = 96/207 (46.38%), Query Frame = 1
Query:   52 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 609
            + T  + ++  G  +K T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+T+++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  213 DKTIKMWEVQTGYCVK-TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20
Identity = 59/192 (30.73%), Postives = 97/192 (50.52%), Query Frame = 1
Query:  112 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPD 687
            AH   V+++     +  ++ T   D  + +W + K           LTGH+  V+ V L++  +  ++GS  G +R+WDL   K  R  +GH  ++ S+ F      + S S+D  IKLW+     K  +     H++ V C+RFSP+     + SA+ D TVK+W+L+  K+ +   GHTG VN V   P+
Sbjct:   18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS-----LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLRFSPD--GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 200          

HSP 2 Score: 94.7449 bits (234), Expect = 4.940e-19
Identity = 64/199 (32.16%), Postives = 101/199 (50.75%), Query Frame = 1
Query:  103 TMRAHTDMVTAIA--TPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690
            ++  HT  V ++   TP    ++IV  S+  SI VW L   +       R L GH   +  +     G+F  SGS D  ++LWD+       R+ GH++ V  + FS D + + SA+ D T+KLW+ T G+    + E   HT  V+ V F PN  +  + S S DRT++ W+L   ++ + + G  G V +V  +PDG
Sbjct:   58 SLTGHTSPVESVRLNTP---EELIVAGSQSGSIRVWDLEAAK-----ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM---MSEFPGHTGPVNVVEFHPN--EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20
Identity = 59/192 (30.73%), Postives = 97/192 (50.52%), Query Frame = 1
Query:  112 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPD 687
            AH   V+++     +  ++ T   D  + +W + K           LTGH+  V+ V L++  +  ++GS  G +R+WDL   K  R  +GH  ++ S+ F      + S S+D  IKLW+     K  +     H++ V C+RFSP+     + SA+ D TVK+W+L+  K+ +   GHTG VN V   P+
Sbjct:   18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS-----LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLRFSPD--GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 200          

HSP 2 Score: 94.7449 bits (234), Expect = 4.940e-19
Identity = 64/199 (32.16%), Postives = 101/199 (50.75%), Query Frame = 1
Query:  103 TMRAHTDMVTAIA--TPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690
            ++  HT  V ++   TP    ++IV  S+  SI VW L   +       R L GH   +  +     G+F  SGS D  ++LWD+       R+ GH++ V  + FS D + + SA+ D T+KLW+ T G+    + E   HT  V+ V F PN  +  + S S DRT++ W+L   ++ + + G  G V +V  +PDG
Sbjct:   58 SLTGHTSPVESVRLNTP---EELIVAGSQSGSIRVWDLEAAK-----ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM---MSEFPGHTGPVNVVEFHPN--EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: KTNB1_CHICK (Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19
Identity = 59/191 (30.89%), Postives = 96/191 (50.26%), Query Frame = 1
Query:  112 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSP 684
            AH+  V+++        ++ T   D  + VW + K           LTGH+  ++ + +S+  +  ++GS  G +R+WDL   K  R  +GH  ++ S+ F      + S S D  IKLW+     K  I +  +HT+ V C+RFSP+     + SA+ D TVK+W+L+  K+     GH+G VN V   P
Sbjct:   18 AHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMS-----LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV--RRKGCIFKYKSHTQAVRCLRFSPD--GKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHP 199          

HSP 2 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 57/195 (29.23%), Postives = 94/195 (48.21%), Query Frame = 1
Query:  127 VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690
            +T   TPI++       ++IV  S+  SI VW L   +       R L GH   +  +     G F  SGS D +++LWD+       ++  HT+ V  + FS D + + SA+ D T+KLW+ T G+  +   E   H+  V+ V F P+  +  + S S DRT++ W+L    + + +      V  +  +PDG
Sbjct:   59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAK-----ILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMF---EFTGHSGPVNVVEFHPS--EYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDG 243          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: NLE1_BOVIN (Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19
Identity = 62/205 (30.24%), Postives = 111/205 (54.15%), Query Frame = 1
Query:  103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSA-RRFVGHTKDVLSVAF-----SIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696
            ++  H++ V ++A        + + S D ++  W L+ E   +        GH H+V  +  S DG+   SG  +G++ LWD + GK   R   GH+K + ++++     + + R + S+S+D ++++W+T  G C+ T+     H + V+C+R+  + L   + SAS DRT+KVW   +  L  TL GH  +VNT+A+S D +L
Sbjct:  109 SLEGHSEAVISVAFS-PTGKYLASGSGDTTVRFWDLSTETPHF-----TCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLT---GHAQSVTCLRWGGDGL---LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301          

HSP 2 Score: 78.9518 bits (193), Expect = 2.805e-14
Identity = 74/239 (30.96%), Postives = 100/239 (41.84%), Query Frame = 1
Query:  103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD-----GQFA-------------------------------------LSGSWDGELRLWDLAEGKSA-RRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690
            T+  H   VT +    D   ++ +AS+D++I VW         GV  R L GH H+V  + LS+D     G F                                      +SGS D  L LW  AE K    R  GH   +  V FS D+R I SAS D++IKLW+  G     +     H   V  + +S ++    +VS S D T+KVW++   KL   L GH   V  V  SPDG
Sbjct:  241 TLTGHAQSVTCLRWGGDG--LLYSASQDRTIKVWRAHD-----GVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWD--GRTGKYLASLRGHVAAVYQIAWSADSR--LLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDG 468          

HSP 3 Score: 78.5666 bits (192), Expect = 3.664e-14
Identity = 45/150 (30.00%), Postives = 77/150 (51.33%), Query Frame = 1
Query:  160 DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 609
            + +V+ S D ++ +W   +++K       R+TGH   +  VV S D +   S S+D  ++LWD   GK      GH   V  +A+S D+R +VS S D T+K+W+   +   T   G  H + V  V +SP+  +  + S   D+ +++W
Sbjct:  342 ERLVSGSDDFTLFLWSPAEDKKPLA----RMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPG--HADEVYAVDWSPDGQR--VASGGKDKCLRIW 483          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: WDR5B_PONAB (WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19
Identity = 54/150 (36.00%), Postives = 85/150 (56.67%), Query Frame = 1
Query:  250 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696
            L GH+  V  V  S +G++  S S D  + +W   +GK  R   GH  ++  VA+S D+ ++VSAS D+T+KLW+   G+C  T++    H+ +V C  F+P +    I+S S+D TVK+W +   K   TL+ H+  V+ V  +  GSL
Sbjct:   37 LVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYERTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLK---GHSNYVFCCNFNPPS--NLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSL 181          

HSP 2 Score: 92.8189 bits (229), Expect = 1.877e-18
Identity = 65/201 (32.34%), Postives = 101/201 (50.25%), Query Frame = 1
Query:   94 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTG-YVNTVAVSPDG 690
            LK T+  HT+ V+++     N + + ++S D+ II+W         G   R L GH+  + DV  SSD    +S S D  L+LWD+  GK  +   GH+  V    F+  +  I+S S D T+K+W    G+C  T+    AH++ VS V F  N     IVS S+D   ++W+ ++ +   TL       V+ V  SP+G
Sbjct:   33 LKCTLVGHTEAVSSVKFS-PNGEWLASSSADRLIIIWGAYD-----GKYERTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTL---SAHSDPVSAVHF--NCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNG 222          

HSP 3 Score: 86.6557 bits (213), Expect = 1.345e-16
Identity = 69/217 (31.80%), Postives = 108/217 (49.77%), Query Frame = 1
Query:   52 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLS-VAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696
            + T  +  M  G  LK T++ H++ V         S++I++ S D+++ +W    E KT G   + L+ HS  V  V  +  G   +SGS+DG  R+WD A G+  +  V      +S V FS + + I++A+ D T+KLW+ + G C  T   G  + ++     FS  T    IVS S D  V +WNL   ++   L GHT  V + A  P  +L
Sbjct:  104 DKTLKLWDMRSGKCLK-TLKGHSNYVFCCNFN-PPSNLIISGSFDETVKIW----EVKT-GKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT-GHKNEKYCIFANFSV-TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENL 311          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: NLE1_PONAB (Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19
Identity = 62/205 (30.24%), Postives = 110/205 (53.66%), Query Frame = 1
Query:  103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSA-RRFVGHTKDVLSVAF-----SIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696
            ++  H++ V ++A        + + S D ++  W L+ E   +        GH H+V  +  S DG+   SG  +G++ LWD + GK   R   GH+K +  +++     + + R + S+S+D ++++W+T  G C+  +     HT+ V+C+R+  + L   + SAS DRT+KVW   +  L  TL GH  +VNT+A+S D +L
Sbjct:  109 SLEGHSEAVISVAFS-PTGKYLASGSGDTTVRFWDLSTETPHF-----TCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILT---GHTQSVTCLRWGGDGL---LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301          

HSP 2 Score: 76.6406 bits (187), Expect = 1.392e-13
Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 1
Query:  160 DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 609
            + +V+ S D ++ +W   +++K       R+TGH   +  V+ S D +   S S+D  ++LWD   GK      GH   V  +A+S D+R +VS S D T+K+W+   + +    +   H + V  V +SP+  +  + S   D+ +++W
Sbjct:  342 ERLVSGSDDFTLFLWSPAEDKKPL----TRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV--KAQKLAMDLPGHADEVYAVDWSPDGQR--VASGGKDKCLRIW 483          
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: NLE1_HUMAN (Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19
Identity = 62/205 (30.24%), Postives = 110/205 (53.66%), Query Frame = 1
Query:  103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSA-RRFVGHTKDVLSVAF-----SIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696
            ++  H++ V ++A        + + S D ++  W L+ E   +        GH H+V  +  S DG+   SG  +G++ LWD + GK   R   GH+K +  +++     + + R + S+S+D ++++W+T  G C+  +     HT+ V+C+R+  + L   + SAS DRT+KVW   +  L  TL GH  +VNT+A+S D +L
Sbjct:  109 SLEGHSEAVISVAFS-PTGKYLASGSGDTTVRFWDLSTETPHF-----TCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILT---GHTQSVTCLRWGGDGL---LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301          

HSP 2 Score: 76.6406 bits (187), Expect = 1.392e-13
Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 1
Query:  160 DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 609
            + +V+ S D ++ +W   +++K       R+TGH   +  V+ S D +   S S+D  ++LWD   GK      GH   V  +A+S D+R +VS S D T+K+W+   + +    +   H + V  V +SP+  +  + S   D+ +++W
Sbjct:  342 ERLVSGSDDFTLFLWSPAEDKKPL----TRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV--KAQKLAMDLPGHADEVYAVDWSPDGQR--VASGGKDKCLRIW 483          
The following BLAST results are available for this feature:
BLAST of FC920456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 338
Match NameE-valueIdentityDescription
LIS1A_DANRE5.836e-2035.59Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1... [more]
LIS1_PIG7.622e-2035.03Platelet-activating factor acetylhydrolase IB subu... [more]
LIS1_BOVIN7.622e-2035.03Platelet-activating factor acetylhydrolase IB subu... [more]
KTNB1_MOUSE7.622e-2030.73Katanin p80 WD40-containing subunit B1 OS=Mus musc... [more]
KTNB1_HUMAN7.622e-2030.73Katanin p80 WD40-containing subunit B1 OS=Homo sap... [more]
KTNB1_CHICK1.300e-1930.89Katanin p80 WD40-containing subunit B1 OS=Gallus g... [more]
NLE1_BOVIN1.698e-1930.24Notchless protein homolog 1 OS=Bos taurus GN=NLE1 ... [more]
WDR5B_PONAB2.218e-1936.00WD repeat-containing protein 5B OS=Pongo abelii PE... [more]
NLE1_PONAB2.218e-1930.24Notchless protein homolog 1 OS=Pongo abelii GN=NLE... [more]
NLE1_HUMAN2.218e-1930.24Notchless protein homolog 1 OS=Homo sapiens GN=NLE... [more]

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Properties
Property NameValue
Genbank descriptionC32008F05EF RVDevelop1 Citrus clementina cDNA clone C32008F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920456 ID=FC920456; Name=FC920456; organism=Citrus clementina; type=EST; length=699bp
GCTAGCTCGCCTCTACAAACCCTAACAGCAGGGGGGAAAAAAAAAAATAC
CGAAAGTACATTTGCTATCGGAAAAATGGCTGAAGGTCTCGTTCTCAAAG
GAACCATGCGCGCCCACACCGACATGGTAACGGCGATCGCCACCCCAATC
GACAACTCTGACATGATCGTGACGGCCTCGCGTGACAAGTCCATCATTGT
CTGGCACCTCACTAAGGAGGAAAAGACCTACGGCGTTGCGCGCCGTCGTT
TGACCGGCCACTCTCACTTCGTGCAGGACGTCGTCCTCTCCTCGGACGGC
CAGTTCGCTCTCTCCGGCTCCTGGGACGGCGAGCTCCGCCTCTGGGATTT
GGCCGAGGGCAAATCCGCCCGCAGGTTCGTCGGCCACACTAAGGACGTTC
TCTCCGTCGCCTTCTCGATCGACAACCGTCAGATTGTATCGGCCTCTCGT
GACCGTACGATCAAGTTGTGGAACACGCTCGGCGAGTGCAAGTACACGAT
TCAAGAGGGAGACGCTCACACTGAGTGGGTTTCTTGTGTTAGGTTCAGCC
CCAACACGCTTCAGCCCACTATCGTTTCCGCCTCGTGGGACCGTACGGTC
AAAGTGTGGAATTTGAGCAACTGCAAGCTTAGGGCTACTCTTGCCGGGCA
CACTGGATACGTGAACACCGTCGCAGTGTCGCCGGATGGTTCGTTGTGT
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