FC920456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: LIS1A_DANRE (Lissencephaly-1 homolog A OS=Danio rerio GN=pafah1b1a PE=2 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20 Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 163 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 693 +IV+AS D +I VW + G R L GH+ VQD+ G+ S S D ++LWD + R GH +V SVA + IVSASRD+TIK+W Y ++ H EWV VR PN I S+S D+TV+VW ++ + +A L H V ++ +P+ + Sbjct: 122 VIVSASEDATIKVW-----DHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--ATGYCVKTFTGHREWVRMVR--PNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESA 289 HSP 2 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 63/215 (29.30%), Postives = 101/215 (46.98%), Query Frame = 1 Query: 103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSA------------------SWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690 T++ HTD V I+ ++ + S D +I +W E R + GH H V V + +G +S S D +++W++A G + F GH + V V + D I S+S D+T+++W ECK ++E H V C+ ++P + PTI+ A S D+T+K+W++S TL GH +V V V P G Sbjct: 145 TLKGHTDSVQDISFD-HTGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGG 350 HSP 3 Score: 80.8777 bits (198), Expect = 7.382e-15 Identity = 60/211 (28.44%), Postives = 100/211 (47.39%), Query Frame = 1 Query: 103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQ--------------------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 672 TM H V+++A + N D IV+ASRDK+I +W E G + TGH +V+ V + DG S S D +R+W +A + H V ++++ ++ ++S SRD+TIK+W+ ++G C T+ H WV V P IVS + D+T+++W+ N + TL+ H +V ++ Sbjct: 187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLV---GHDNWVRGVLVHPGGKY--IVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSL 386 HSP 4 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 52/150 (34.67%), Postives = 72/150 (48.00%), Query Frame = 1 Query: 250 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696 L+GH V V+ +S S D +++WD G R GHT V ++F + + S S D TIKLW+ G EC T+ H VS V PN IVSAS D+T+K+W ++ T GH +V V + DG+L Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTL 248 HSP 5 Score: 71.633 bits (174), Expect = 4.479e-12 Identity = 54/207 (26.09%), Postives = 96/207 (46.38%), Query Frame = 1 Query: 52 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 609 + T + ++A G +K T H + V + P + +I ++S D+++ VW + +E + L H H V+ + + + G F LSGS D +++WD++ G VGH V V + IVS + D+T+++W+ + C T+ AH +V+ + F + P +V+ S D+TVKVW Sbjct: 213 DKTIKMWEVATGYCVK-TFTGHREWVRMVR-PNQDGTLIASSSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTL---SAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: LIS1_PIG (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus scrofa GN=PAFAH1B1 PE=2 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20 Identity = 62/177 (35.03%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 163 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 693 ++V+AS D +I VW + G R L GH+ VQD+ G+ S S D ++LWD + R GH +V SVA + IVSA+RD+TIK+W + Y ++ H EWV VR PN I S S D+TV+VW ++ + +A L H V ++ +P+ S Sbjct: 122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289 HSP 2 Score: 85.5001 bits (210), Expect = 2.997e-16 Identity = 59/216 (27.31%), Postives = 99/216 (45.83%), Query Frame = 1 Query: 103 TMRAHTDMVTAIATPIDNSD-MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690 T++ HTD V I+ D+S ++ + S D +I +W E R + GH H V V + +G +S + D +++W++ G + F GH + V V + D I S S D+T+++W ECK ++E H V C+ ++P + P ++S S D+T+K+W++S TL GH +V V G Sbjct: 145 TLKGHTDSVQDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350 HSP 3 Score: 78.1814 bits (191), Expect = 4.785e-14 Identity = 51/150 (34.00%), Postives = 71/150 (47.33%), Query Frame = 1 Query: 250 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696 L+GH V V+ +S S D +++WD G R GHT V ++F + + S S D TIKLW+ G EC T+ H VS V PN IVSA+ D+T+K+W + T GH +V V + DG+L Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248 HSP 4 Score: 74.7146 bits (182), Expect = 5.290e-13 Identity = 64/211 (30.33%), Postives = 98/211 (46.45%), Query Frame = 1 Query: 103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 672 TM H V+++A + N D IV+A+RDK+I +W E G + TGH +V+ V + DG S S D +R+W +A E K+ R H + +S A I +S SRD+TIK+W+ + G C T+ H WV V F I+S + D+T++VW+ N + TL H +V ++ Sbjct: 187 TMHGHDHNVSSVAI-MPNGDHIVSAARDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386 HSP 5 Score: 71.2478 bits (173), Expect = 5.849e-12 Identity = 53/207 (25.60%), Postives = 96/207 (46.38%), Query Frame = 1 Query: 52 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 609 + T + ++ G +K T H + V + P + +I + S D+++ VW + +E + L H H V+ + + + G F LSGS D +++WD++ G VGH V V F + I+S + D+T+++W+ + C T+ +AH +V+ + F + P +V+ S D+TVKVW Sbjct: 213 DKTIKMWEVQTGYCVK-TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: LIS1_BOVIN (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos taurus GN=PAFAH1B1 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20 Identity = 62/177 (35.03%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 163 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 693 ++V+AS D +I VW + G R L GH+ V+D+ G+ S S D ++LWD + R GH +V SVA + IVSASRD+TIK+W + Y ++ H EWV VR PN I S S D+TV+VW ++ + +A L H V ++ +P+ S Sbjct: 122 VMVSASEDATIKVW-----DYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 289 HSP 2 Score: 86.6557 bits (213), Expect = 1.345e-16 Identity = 60/216 (27.78%), Postives = 99/216 (45.83%), Query Frame = 1 Query: 103 TMRAHTDMVTAIATPIDNSD-MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690 T++ HTD V I+ D+S ++ + S D +I +W E R + GH H V V + +G +S S D +++W++ G + F GH + V V + D I S S D+T+++W ECK ++E H V C+ ++P + P ++S S D+T+K+W++S TL GH +V V G Sbjct: 145 TLKGHTDSVEDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 350 HSP 3 Score: 78.9518 bits (193), Expect = 2.805e-14 Identity = 52/150 (34.67%), Postives = 71/150 (47.33%), Query Frame = 1 Query: 250 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696 L+GH V V+ +S S D +++WD G R GHT V ++F + + S S D TIKLW+ G EC T+ H VS V PN IVSAS D+T+K+W + T GH +V V + DG+L Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL 248 HSP 4 Score: 75.8702 bits (185), Expect = 2.375e-13 Identity = 65/211 (30.81%), Postives = 98/211 (46.45%), Query Frame = 1 Query: 103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--EGKSARRFVGHTKDVLSVAFSIDNRQI------------------VSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 672 TM H V+++A + N D IV+ASRDK+I +W E G + TGH +V+ V + DG S S D +R+W +A E K+ R H + +S A I +S SRD+TIK+W+ + G C T+ H WV V F I+S + D+T++VW+ N + TL H +V ++ Sbjct: 187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386 HSP 5 Score: 71.2478 bits (173), Expect = 5.849e-12 Identity = 53/207 (25.60%), Postives = 96/207 (46.38%), Query Frame = 1 Query: 52 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 609 + T + ++ G +K T H + V + P + +I + S D+++ VW + +E + L H H V+ + + + G F LSGS D +++WD++ G VGH V V F + I+S + D+T+++W+ + C T+ +AH +V+ + F + P +V+ S D+TVKVW Sbjct: 213 DKTIKMWEVQTGYCVK-TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20 Identity = 59/192 (30.73%), Postives = 97/192 (50.52%), Query Frame = 1 Query: 112 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPD 687 AH V+++ + ++ T D + +W + K LTGH+ V+ V L++ + ++GS G +R+WDL K R +GH ++ S+ F + S S+D IKLW+ K + H++ V C+RFSP+ + SA+ D TVK+W+L+ K+ + GHTG VN V P+ Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS-----LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLRFSPD--GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 200 HSP 2 Score: 94.7449 bits (234), Expect = 4.940e-19 Identity = 64/199 (32.16%), Postives = 101/199 (50.75%), Query Frame = 1 Query: 103 TMRAHTDMVTAIA--TPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690 ++ HT V ++ TP ++IV S+ SI VW L + R L GH + + G+F SGS D ++LWD+ R+ GH++ V + FS D + + SA+ D T+KLW+ T G+ + E HT V+ V F PN + + S S DRT++ W+L ++ + + G G V +V +PDG Sbjct: 58 SLTGHTSPVESVRLNTP---EELIVAGSQSGSIRVWDLEAAK-----ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM---MSEFPGHTGPVNVVEFHPN--EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20 Identity = 59/192 (30.73%), Postives = 97/192 (50.52%), Query Frame = 1 Query: 112 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPD 687 AH V+++ + ++ T D + +W + K LTGH+ V+ V L++ + ++GS G +R+WDL K R +GH ++ S+ F + S S+D IKLW+ K + H++ V C+RFSP+ + SA+ D TVK+W+L+ K+ + GHTG VN V P+ Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS-----LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLRFSPD--GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 200 HSP 2 Score: 94.7449 bits (234), Expect = 4.940e-19 Identity = 64/199 (32.16%), Postives = 101/199 (50.75%), Query Frame = 1 Query: 103 TMRAHTDMVTAIA--TPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690 ++ HT V ++ TP ++IV S+ SI VW L + R L GH + + G+F SGS D ++LWD+ R+ GH++ V + FS D + + SA+ D T+KLW+ T G+ + E HT V+ V F PN + + S S DRT++ W+L ++ + + G G V +V +PDG Sbjct: 58 SLTGHTSPVESVRLNTP---EELIVAGSQSGSIRVWDLEAAK-----ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM---MSEFPGHTGPVNVVEFHPN--EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: KTNB1_CHICK (Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19 Identity = 59/191 (30.89%), Postives = 96/191 (50.26%), Query Frame = 1 Query: 112 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSP 684 AH+ V+++ ++ T D + VW + K LTGH+ ++ + +S+ + ++GS G +R+WDL K R +GH ++ S+ F + S S D IKLW+ K I + +HT+ V C+RFSP+ + SA+ D TVK+W+L+ K+ GH+G VN V P Sbjct: 18 AHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMS-----LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV--RRKGCIFKYKSHTQAVRCLRFSPD--GKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHP 199 HSP 2 Score: 82.0333 bits (201), Expect = 3.314e-15 Identity = 57/195 (29.23%), Postives = 94/195 (48.21%), Query Frame = 1 Query: 127 VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690 +T TPI++ ++IV S+ SI VW L + R L GH + + G F SGS D +++LWD+ ++ HT+ V + FS D + + SA+ D T+KLW+ T G+ + E H+ V+ V F P+ + + S S DRT++ W+L + + + V + +PDG Sbjct: 59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAK-----ILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMF---EFTGHSGPVNVVEFHPS--EYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDG 243
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: NLE1_BOVIN (Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19 Identity = 62/205 (30.24%), Postives = 111/205 (54.15%), Query Frame = 1 Query: 103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSA-RRFVGHTKDVLSVAF-----SIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696 ++ H++ V ++A + + S D ++ W L+ E + GH H+V + S DG+ SG +G++ LWD + GK R GH+K + ++++ + + R + S+S+D ++++W+T G C+ T+ H + V+C+R+ + L + SAS DRT+KVW + L TL GH +VNT+A+S D +L Sbjct: 109 SLEGHSEAVISVAFS-PTGKYLASGSGDTTVRFWDLSTETPHF-----TCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLT---GHAQSVTCLRWGGDGL---LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301 HSP 2 Score: 78.9518 bits (193), Expect = 2.805e-14 Identity = 74/239 (30.96%), Postives = 100/239 (41.84%), Query Frame = 1 Query: 103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD-----GQFA-------------------------------------LSGSWDGELRLWDLAEGKSA-RRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690 T+ H VT + D ++ +AS+D++I VW GV R L GH H+V + LS+D G F +SGS D L LW AE K R GH + V FS D+R I SAS D++IKLW+ G + H V + +S ++ +VS S D T+KVW++ KL L GH V V SPDG Sbjct: 241 TLTGHAQSVTCLRWGGDG--LLYSASQDRTIKVWRAHD-----GVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWD--GRTGKYLASLRGHVAAVYQIAWSADSR--LLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDG 468 HSP 3 Score: 78.5666 bits (192), Expect = 3.664e-14 Identity = 45/150 (30.00%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 160 DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 609 + +V+ S D ++ +W +++K R+TGH + VV S D + S S+D ++LWD GK GH V +A+S D+R +VS S D T+K+W+ + T G H + V V +SP+ + + S D+ +++W Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPLA----RMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPG--HADEVYAVDWSPDGQR--VASGGKDKCLRIW 483
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: WDR5B_PONAB (WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19 Identity = 54/150 (36.00%), Postives = 85/150 (56.67%), Query Frame = 1 Query: 250 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696 L GH+ V V S +G++ S S D + +W +GK R GH ++ VA+S D+ ++VSAS D+T+KLW+ G+C T++ H+ +V C F+P + I+S S+D TVK+W + K TL+ H+ V+ V + GSL Sbjct: 37 LVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYERTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLK---GHSNYVFCCNFNPPS--NLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSL 181 HSP 2 Score: 92.8189 bits (229), Expect = 1.877e-18 Identity = 65/201 (32.34%), Postives = 101/201 (50.25%), Query Frame = 1 Query: 94 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTG-YVNTVAVSPDG 690 LK T+ HT+ V+++ N + + ++S D+ II+W G R L GH+ + DV SSD +S S D L+LWD+ GK + GH+ V F+ + I+S S D T+K+W G+C T+ AH++ VS V F N IVS S+D ++W+ ++ + TL V+ V SP+G Sbjct: 33 LKCTLVGHTEAVSSVKFS-PNGEWLASSSADRLIIIWGAYD-----GKYERTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTL---SAHSDPVSAVHF--NCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNG 222 HSP 3 Score: 86.6557 bits (213), Expect = 1.345e-16 Identity = 69/217 (31.80%), Postives = 108/217 (49.77%), Query Frame = 1 Query: 52 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLS-VAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696 + T + M G LK T++ H++ V S++I++ S D+++ +W E KT G + L+ HS V V + G +SGS+DG R+WD A G+ + V +S V FS + + I++A+ D T+KLW+ + G C T G + ++ FS T IVS S D V +WNL ++ L GHT V + A P +L Sbjct: 104 DKTLKLWDMRSGKCLK-TLKGHSNYVFCCNFN-PPSNLIISGSFDETVKIW----EVKT-GKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYT-GHKNEKYCIFANFSV-TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENL 311
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: NLE1_PONAB (Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19 Identity = 62/205 (30.24%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSA-RRFVGHTKDVLSVAF-----SIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696 ++ H++ V ++A + + S D ++ W L+ E + GH H+V + S DG+ SG +G++ LWD + GK R GH+K + +++ + + R + S+S+D ++++W+T G C+ + HT+ V+C+R+ + L + SAS DRT+KVW + L TL GH +VNT+A+S D +L Sbjct: 109 SLEGHSEAVISVAFS-PTGKYLASGSGDTTVRFWDLSTETPHF-----TCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILT---GHTQSVTCLRWGGDGL---LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301 HSP 2 Score: 76.6406 bits (187), Expect = 1.392e-13 Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 160 DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 609 + +V+ S D ++ +W +++K R+TGH + V+ S D + S S+D ++LWD GK GH V +A+S D+R +VS S D T+K+W+ + + + H + V V +SP+ + + S D+ +++W Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPL----TRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV--KAQKLAMDLPGHADEVYAVDWSPDGQR--VASGGKDKCLRIW 483
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: NLE1_HUMAN (Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19 Identity = 62/205 (30.24%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSA-RRFVGHTKDVLSVAF-----SIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696 ++ H++ V ++A + + S D ++ W L+ E + GH H+V + S DG+ SG +G++ LWD + GK R GH+K + +++ + + R + S+S+D ++++W+T G C+ + HT+ V+C+R+ + L + SAS DRT+KVW + L TL GH +VNT+A+S D +L Sbjct: 109 SLEGHSEAVISVAFS-PTGKYLASGSGDTTVRFWDLSTETPHF-----TCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILT---GHTQSVTCLRWGGDGL---LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYAL 301 HSP 2 Score: 76.6406 bits (187), Expect = 1.392e-13 Identity = 42/150 (28.00%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 160 DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 609 + +V+ S D ++ +W +++K R+TGH + V+ S D + S S+D ++LWD GK GH V +A+S D+R +VS S D T+K+W+ + + + H + V V +SP+ + + S D+ +++W Sbjct: 342 ERLVSGSDDFTLFLWSPAEDKKPL----TRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV--KAQKLAMDLPGHADEVYAVDWSPDGQR--VASGGKDKCLRIW 483 The following BLAST results are available for this feature:
BLAST of FC920456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 338
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920456 ID=FC920456; Name=FC920456; organism=Citrus clementina; type=EST; length=699bpback to top |