FC920456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: LIS1_DICDI (Lissencephaly-1 homolog OS=Dictyostelium discoideum GN=lis1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18 Identity = 53/149 (35.57%), Postives = 75/149 (50.34%), Query Frame = 1 Query: 250 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 693 LTGH + + V +S S D +++WD G+ R GHT V + F + S S D TIKLW+ +C T+ H VSCVRF+P+ Q ++S+S D+T+KVW + TL GH +V + VS DGS Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLH---GHDHNVSCVRFTPSGDQ--LISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGS 245 HSP 2 Score: 87.8113 bits (216), Expect = 6.039e-17 Identity = 66/225 (29.33%), Postives = 99/225 (44.00%), Query Frame = 1 Query: 103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFS-------PNTLQPT---------------------IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690 T++ HT+ V I +++ + S D +I +W +TY + L GH H V V + G +S S D +++W+ A G + VGH V + S D I S S D+TIK WN + GEC T +E H+ V C+ FS P +L T + + S D+T+K+W L+ + AT GH +V V P G Sbjct: 143 TLKGHTNAVQDIDFD-KTGNLLASCSADLTIKLWDF----QTYDCVKT-LHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYRE---HSHVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCG 358 HSP 3 Score: 86.6557 bits (213), Expect = 1.345e-16 Identity = 56/173 (32.37%), Postives = 83/173 (47.98%), Query Frame = 1 Query: 163 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVS 681 ++V+AS D +I VW G R L GH++ VQD+ G S S D ++LWD + GH +V V F+ Q++S+SRD+TIK+W Y I+ H +WV + S + I S S D+T+K WN+ + AT H+ V +A S Sbjct: 120 LMVSASEDATIKVWDFES-----GEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE--AATGYCIKTLVGHEDWVRKITVSED--GSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS 283
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: Y143_SYNY3 (Uncharacterized WD repeat-containing protein slr0143 OS=Synechocystis sp. (strain PCC 6803) GN=slr0143 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.589e-17 Identity = 54/147 (36.73%), Postives = 77/147 (52.38%), Query Frame = 1 Query: 250 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690 LTGH V V +SS S S DG + LW +G+ R F GHT + V FS + + +A +D+T+K+W+ G T++ H + V V FSP+ + S S DRTV++W+ + K A L GHT V+ SPDG Sbjct: 556 LTGHRDGVTSVAISSHKNLIASASRDGTVHLWT-PQGEFLREFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDLDGNLLQTLK---GHQDSVYSVSFSPD--GEILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDG 696 HSP 2 Score: 85.8853 bits (211), Expect = 2.295e-16 Identity = 65/254 (25.59%), Postives = 110/254 (43.31%), Query Frame = 1 Query: 49 TESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLS----------------------------------------NCKLRATLAGHTGYVNTVAVSPDG 690 T ++ ++ + K + H D VT++A + ++I +ASRD ++ +W G R TGH+ + V S +G+ + D +++WDL +G + GH V SV+FS D + S SRDRT++LW+ + G HT+ V +FSP+ T+VS D +++W+L +++ATL+GH +V V +PDG Sbjct: 537 TSPLVSLQQILSQIAEKNVLTGHRDGVTSVAIS-SHKNLIASASRDGTVHLW------TPQGEFLREFTGHTGSIYRVDFSPNGKIFATAGQDQTVKIWDL-DGNLLQTLKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSGKTLAVLGG--HTKSVDDAQFSPD--GQTLVSVCRDGQIRLWDLDGNLIRQFGLPEVAFFGVNWHPNGNLLAVAADDGTVRLWTPQGEIKATLSGHDEFVTRVVFTPDG 778 HSP 3 Score: 67.781 bits (164), Expect = 6.467e-11 Identity = 44/105 (41.90%), Postives = 55/105 (52.38%), Query Frame = 1 Query: 382 GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696 GH V SVA S I SASRD T+ LW GE ++E HT + V FSPN +A D+TVK+W+L L TL GH V +V+ SPDG + Sbjct: 558 GHRDGVTSVAISSHKNLIASASRDGTVHLWTPQGEF---LREFTGHTGSIYRVDFSPNG--KIFATAGQDQTVKIWDLDG-NLLQTLKGHQDSVYSVSFSPDGEI 656
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: MUT11_CHLRE (Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.589e-17 Identity = 72/223 (32.29%), Postives = 111/223 (49.78%), Query Frame = 1 Query: 7 SPLQTLTAGGKKKNTESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLS-SDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNT 669 SP +L A G + + T A+ A G + T+ H+ V+ +A N + TA+ D S+ +W + G R LTGH+++V + G SGS+D LRLWD+ G+ R H+ V S AFS D +V++S D I+LW+T G C T+ + D+ VS F+PN ++ + D K+W+ + + R T AG G+VNT Sbjct: 49 SPDGSLLASG---SADRTVALWDAATGARVN-TLAGHSCGVSDVAWN-PNGRYLATAADDHSLKLW-----DAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDTQTGHCLKTLFDRDSPP--VSFAAFTPNA--KYVLCNTLDGRAKLWDYAAGRTRRTYAG--GHVNT 255 HSP 2 Score: 82.0333 bits (201), Expect = 3.314e-15 Identity = 48/150 (32.00%), Postives = 76/150 (50.67%), Query Frame = 1 Query: 250 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696 L+GH+ V V S DG SGS D + LWD A G GH+ V VA++ + R + +A+ D ++KLW+ G C T+ HT +V C F + S S+D T+++W++ + + + H+ V + A S DGS+ Sbjct: 36 LSGHTKAVAAVKFSPDGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTL---TGHTNYVFCCNFD-GAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSM 181
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.076e-17 Identity = 72/244 (29.51%), Postives = 111/244 (45.49%), Query Frame = 1 Query: 13 LQTLTAGGKKKNTESTFAIGKMAEGLVLKGTMRAHTDM-----------VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690 LQ + A G ++ S+ +GK + LV G ++ +T TP+++ ++IV S+ S+ VW L + R L GH V + G F SGS D ++LWD+ R+ GHT+ V + FS D + + SAS D ++KLW+ T G+ + E H V+ + F PN + + S S DRTV+ W+L +L G T V + S DG Sbjct: 13 LQEIVAHG---SSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAK-----ILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSE---HKGPVNIIEFHPN--EYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDG 243
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.076e-17 Identity = 61/195 (31.28%), Postives = 94/195 (48.21%), Query Frame = 1 Query: 127 VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690 +T TP+++ ++IV S+ S+ +W L + R L GH V + G+F SGS D ++LWD+ R+ GHT+ V + FS D + + SAS D ++KLW+ T G+ + E H V+ + F PN + + S S DRTV+ W+L +L G T V + S DG Sbjct: 59 LTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAK-----ILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSE---HKGPVNIIEFHPN--EYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDG 243
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: SWD3_SCHPO (Set1 complex component swd3 OS=Schizosaccharomyces pombe GN=swd3 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17 Identity = 47/150 (31.33%), Postives = 81/150 (54.00%), Query Frame = 1 Query: 250 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC 699 L GH V V +S + ++ + S DG +++W + GH + + V ++ ++ + SAS D+TI++W+ C +G HT +VS + F+P L +VS SWD TV++WNL + L H+ + +V++S DG+LC Sbjct: 50 LFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKG--HTNYVSSIDFNP--LGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLC 195 HSP 2 Score: 72.7886 bits (177), Expect = 2.010e-12 Identity = 38/118 (32.20%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 157 SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQE 507 S + +AS DK+I +W K + R L GH+++V + + G +SGSWD +R+W+L +G R H++ ++SV+ S D +AS D ++W+ L G+C T+ E Sbjct: 108 SKYLASASDDKTIRIWDFEKR-----CSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVE 220
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: LIS1_DROME (Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.540e-17 Identity = 55/215 (25.58%), Postives = 98/215 (45.58%), Query Frame = 1 Query: 103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQ------------------PTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG 690 +++ HTD V +A ++ + S D SI +W + + + + GH H V V G + LS S D +++W++A G + + GH + V V I+ + S D+TI++W T +CK +++ H V C+ ++P P + S S D+T+++W++S TL+GH +V +A P G Sbjct: 145 SLKGHTDSVQDVAFDAQGK-LLASCSADLSIKLWDFQQSYECI----KTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRD---HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGG 351 HSP 2 Score: 86.2705 bits (212), Expect = 1.757e-16 Identity = 57/179 (31.84%), Postives = 90/179 (50.28%), Query Frame = 1 Query: 163 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEG-KSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTI-VSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS 693 ++V+AS D +I +W G R L GH+ VQDV + G+ S S D ++LWD + + + GH +V SVAF ++SASRDRTIK+W Y ++ H EWV VR ++ +I + S D+T++VW ++ + L H V +A +P+ + Sbjct: 122 LMVSASEDATIRIWDFET-----GEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVA--TGYCVKTYTGHREWVRMVRVH---IEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAA 290 HSP 3 Score: 80.4925 bits (197), Expect = 9.642e-15 Identity = 57/177 (32.20%), Postives = 82/177 (46.33%), Query Frame = 1 Query: 184 DKSIIVWHLTKEEKTYGVARRR------LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696 +K +I TK ++T G R LTGH + V+ +S S D +R+WD G+ R GHT V VAF + + S S D +IKLW+ + I+ H VS V F P ++SAS DRT+K+W ++ T GH +V V V +GS+ Sbjct: 76 EKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWD-FQQSYECIKTMHGHDHNVSSVAFVP--AGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSI 249 HSP 4 Score: 75.8702 bits (185), Expect = 2.375e-13 Identity = 60/212 (28.30%), Postives = 102/212 (48.11%), Query Frame = 1 Query: 103 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSAR---RFVGHTKD-----------VLSVAFSIDNRQ-------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 672 TM H V+++A + D +++ASRD++I +W E G + TGH +V+ V + +G + S D +R+W L K + R HT + ++ A DN++ + S SRD+TI++W+ ++G C T+ H WV + F P +VSAS D+T++VW+L N + TL H + ++ Sbjct: 188 TMHGHDHNVSSVAF-VPAGDYVLSASRDRTIKMW-----EVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLS---GHDNWVRGLAFHPGGKY--LVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSI 387 HSP 5 Score: 72.7886 bits (177), Expect = 2.010e-12 Identity = 56/207 (27.05%), Postives = 94/207 (45.41%), Query Frame = 1 Query: 52 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 609 + T + ++A G +K T H + V + I+ S + T S D++I VW ++ + L H H V+ + + + G F SGS D +R+WD++ G GH V +AF + +VSAS D+TI++W+ + C T+ AH + + + F + P ++S S D+TVKVW Sbjct: 214 DRTIKMWEVATGYCVK-TYTGHREWVRMVRVHIEGS-IFATCSNDQTIRVWLTNSKD-----CKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLY---AHQHFCTSIDF--HKAHPYVISGSVDQTVKVW 408
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: GBLP_ENCCU (Guanine nucleotide-binding protein subunit beta-like protein OS=Encephalitozoon cuniculi GN=ECU08_1110 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17 Identity = 58/186 (31.18%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 106 MRAHTDMVTAIA-TPIDNSDMIVTASRDKSIIVWHL-TKEEKTYG-VARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE--CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAG 648 + H D V + + +++ ++SRDK + W L +K + +G + + GHS + + +S DG ++ DG R+WD E K + GH +DVL V+ + ++ +IV+ S DRT+ L+NT G+ K H W++CV F P T + + S S D TVK+W+L + T G Sbjct: 12 LNGHKDEVKGLKIVRVSGREILYSSSRDKKVFSWDLHSKIDSEFGKILKLYDGGHSKRINGLDVSKDGNMMVTVGSDGIGRIWD-TESKKSILLEGHGRDVLCVSINSNDTKIVTGSVDRTMNLYNTKGDLVLKMGRDMEMMHRGWINCVTFHP-TEESILASGSADGTVKIWDLDTQEHLQTYLG 195
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.030e-16 Identity = 59/190 (31.05%), Postives = 91/190 (47.89%), Query Frame = 1 Query: 268 FVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGEC--KYTIQEG-----------------------------------DAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK------------LRATLAGHTGYVNTVAVSPD 687 +V+ + S DG++ ++G+ D +++LWDL+ K F GH +D+ S+ FS + R IVS S DRT +LW+ G+C K I+ G + H E V + FSP++ ++S S D+T+KVW L + +AT GHT +V +VAVSPD Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDS--SILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPD 549 HSP 2 Score: 82.4185 bits (202), Expect = 2.537e-15 Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 106 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEE-------KTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN 474 + H + V +IA D+S ++++ S DK+I VW L K G+ + TGH+ FV V +S D ++ LSGS D ++ WDL G+S GH V+SV FS D RQ S S D ++W+ Sbjct: 480 LEGHKESVYSIAFSPDSS-ILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWS 608
BLAST of FC920456 vs. ExPASy Swiss-Prot
Match: PRP4_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.345e-16 Identity = 57/176 (32.39%), Postives = 82/176 (46.59%), Query Frame = 1 Query: 172 TASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSL 696 T D+S +W L +E+ GHS V D+ DG A +G D R+WDL G+ GH K++ + FS + I + S D T K+W+ C YTI AH V+ V+F P +++ ++D T K+W TLAGH G V + +S DG L Sbjct: 339 TTCYDRSWRLWDLEAQEEIL-----HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI---PAHQNLVTGVKFEP-IHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQL 505 The following BLAST results are available for this feature:
BLAST of FC920456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 338
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920456 ID=FC920456; Name=FC920456; organism=Citrus clementina; type=EST; length=699bpback to top |