FC920457

Overview
NameFC920457
Unique NameFC920457
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length510
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6036 contig Ccv1_Contig6036:93..602. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920457 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.443e-24
Identity = 56/170 (32.94%), Postives = 86/170 (50.59%), Query Frame = 1
Query:   49 IASLSHSN-GTIPAEFVRPEKEQPASATYH-----GPAPEIPTIDLDD----------PVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEY 510
            + SLS S   +IP E++RP++E  +             P++PTIDL D           +++R    + +A+ EWG+  + NHGI  DLI +++  G+ FF LP EEKE Y+    +  + GYG+KL     G+  W D+ FH ++P    +   WP  P  Y     EY
Sbjct:    9 VESLSSSGIQSIPKEYIRPQEELTSIGNVFEEEKKDEGPQVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEY 178          
BLAST of FC920457 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.308e-23
Identity = 56/169 (33.14%), Postives = 88/169 (52.07%), Query Frame = 1
Query:   37 RVQAIASLSHSNGTIPAEFVRPEKE-----QPASATYHGPAPEIPTIDL------DDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEY 510
            RV+ +A    S  TIP E++RP+ E            +   P++PTIDL      ++ V+ +    + +A+ +WG+  + NHGI  +L+ K++  GK FF+LP E+KE Y+    +  +QGYG+KL     G+  W D+ FH V+P    +   WP  P  Y     EY
Sbjct:   10 RVETLAGSGIS--TIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEY 176          
BLAST of FC920457 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.915e-23
Identity = 61/175 (34.86%), Postives = 91/175 (52.00%), Query Frame = 1
Query:   37 RVQAIASLSHSNGTIPAEFVRPEKEQPAS------ATYHG---PAPEIPTID----LDDPVQ----DRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEY 510
            RV+A++    S   IP E+VRP  E+         A  H     AP IP +D    LD   Q    D  V ++  A+ +WG+  +  HGIP++L+ +L+A G  FF LP ++KE Y+    A  +QGYG++L     G++ W D+LFH V P    ++  WP  PP Y A   ++
Sbjct:   13 RVEALSLSGLS--AIPPEYVRPADERAGLGDAFDLARTHANDHTAPRIPVVDISPFLDSSSQQQQRDECVEAVRAAAADWGVMHIAGHGIPAELMDRLRAAGTAFFALPVQDKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDF 185          
BLAST of FC920457 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.807e-23
Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 1
Query:   79 IPAEFVRPEKEQPASATYH-----GPAPEIPTIDLDD-PVQDRLVRS----IAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEY 510
            IP E+VRP++E                P++PTIDL +   +D+ +R     + +A+ EWG+  + NHGI  +LI +++  G+ FF+ P EEKE Y+      +VQGYG+KL     G+  W D+ FH  +P    +   WP NP  Y     EY
Sbjct:   23 IPKEYVRPQEELNGIGNIFEEEKKDEGPQVPTIDLKEIDSEDKEIREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEY 176          
BLAST of FC920457 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 6.289e-18
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 1
Query:   76 TIPAEFVRPEKEQPASATYHGPAPEIPTIDLDDP------VQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEY 510
            T+ + FVR E E+P  A Y+  + EIP I L         V D + R I EA  +WGIFQV NHG+ S+LI ++  + +EFF LP EE   +      K   G+      + E  + W + + +  +P  + +Y  WP+ P  +R+V +EY
Sbjct:   14 TLQSSFVRDEDERPKVA-YNDFSNEIPVISLTKESMKLAAVVDEICRKIVEACEDWGIFQVVNHGVDSNLISEMTRLAREFFALPPEENVRFDMSGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEY 161          
BLAST of FC920457 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.390e-17
Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = 1
Query:   76 TIPAEFVRPEKEQPASATYHGPAPEIPTIDL----DDPVQDR--LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEY 510
            T+ ++FVR E E+P  A Y+  + EIP I L    DD V  R  + R I EA  +WGIFQV +HGI  DLI ++  + ++FF LP EEK  +      K   G+      + E  + W + + +  +P  + +Y  WP+ P  +R++ E Y
Sbjct:   14 TLNSKFVRDEDERPKIA-YNKFSDEIPVISLAGIDDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRFDMTGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMY 161          
BLAST of FC920457 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.076e-17
Identity = 56/165 (33.94%), Postives = 85/165 (51.52%), Query Frame = 1
Query:   25 MEVERVQAIASLSHSNGTIPAEFVRPEKEQPASATYHGPAPEIPTIDL---DDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEY 510
            M  E+ + + SL   +  + + FVR E E+P  A Y+  + +IP I L   D   +  + R I EA  +WGIFQV +HG+  DLI  +  + +EFF LP EEK  +      K      + LQ EV   + W + + +  +P +S +Y  WP+ P  +  V EEY
Sbjct:    1 MVAEKPKTLTSLE-GDDKLNSNFVRDEDERPKVA-YNEFSNDIPVISLAGIDGEKRGEICRKIVEACEDWGIFQVVDHGVGDDLIADMTRLAREFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEV--VQDWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEY 161          
BLAST of FC920457 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.324e-17
Identity = 54/166 (32.53%), Postives = 78/166 (46.99%), Query Frame = 1
Query:   25 MEVERVQAIASLSHSNGTIPAEFVRPEKEQPASATYHGPAPEIPTIDLDDPVQDRL----VRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEY 510
            + VE VQ +A     N  +P  +VRPE E            EIP IDL   +  +     +     A  +WG FQ+ NHG+  ++I K++   ++FF LP +EK  Y +  +   ++GYG       E K  W D  F    P    N RFWP +P S+R   E+Y
Sbjct:   12 LPVENVQVLAGKELKN--LPNRYVRPELEHDDVVPIDNSL-EIPVIDLSRLLDQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNG--MEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKY 172          
BLAST of FC920457 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.688e-16
Identity = 50/159 (31.45%), Postives = 85/159 (53.46%), Query Frame = 1
Query:   49 IASLSHSNGTIPAEFVRPEKEQPASATYHGPAPEIPTIDLD--DPVQDR---LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEY 510
            + S++H   T+  +FVR E E+P  A Y+  + EIP I L   D V+ R   + + I  A  +WGIFQ+ +HG+ ++LI ++  + +EFF LP EEK  +      K   G+      + E  + W + + +  +P    +Y  WP+ P ++R V ++Y
Sbjct:    7 LTSIAHEK-TLQQKFVRDEDERPKVA-YNDFSNEIPIISLAGIDEVEGRRGEICKKIVAACEDWGIFQIVDHGVDAELISEMTGLAREFFALPSEEKLRFDMSGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPIRHRDYSRWPDKPEAWREVTKKY 161          
BLAST of FC920457 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.004e-15
Identity = 53/151 (35.10%), Postives = 77/151 (50.99%), Query Frame = 1
Query:   76 TIPAEFVRPEKEQPASATYHGPAPEIPTIDL---DDPVQDR---LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEY 510
            T+  +FVR E E+P  A Y+  + EIP I L   DD    R   + R I +A  +WGIFQV +HGI S LI ++  + +EFF LP EEK  Y      +      T LQ   +    W + + +  +P ++ +Y  WP  P  +R+  E Y
Sbjct:   14 TLNLDFVRDEDERPKVA-YNQFSNEIPIISLAGLDDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQG--DDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVY 161          
The following BLAST results are available for this feature:
BLAST of FC920457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
LDOX_VITVI3.443e-2432.94Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
LDOX_MALDO1.308e-2333.14Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_MAIZE2.915e-2334.86Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
LDOX_PETHY3.807e-2335.06Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
FL3H_VITVI6.289e-1834.44Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FL3H_PETCR2.390e-1735.10Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_DIACA4.076e-1733.94Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
NCS1_COPJA5.324e-1732.53S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
FL3H_MALDO7.688e-1631.45Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
FNSI_PETCR1.004e-1535.10Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]

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Properties
Property NameValue
Genbank descriptionC32008F06EF RVDevelop1 Citrus clementina cDNA clone C32008F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920457 ID=FC920457; Name=FC920457; organism=Citrus clementina; type=EST; length=510bp
GGGTTTTGCTGGAAAATAAAATTAATGGAGGTGGAGAGGGTCCAAGCCAT
TGCTTCCTTATCCCATTCAAATGGCACAATTCCAGCAGAGTTCGTAAGAC
CCGAAAAAGAACAGCCAGCAAGCGCAACGTACCACGGCCCCGCTCCTGAA
ATCCCCACGATCGATCTCGACGACCCCGTTCAAGACAGACTCGTACGTTC
CATCGCGGAAGCCAGCCGGGAGTGGGGGATTTTCCAGGTTACAAACCACG
GGATACCTAGTGACCTCATCGGTAAACTGCAAGCCGTCGGCAAAGAATTT
TTTGAGCTCCCTCAGGAAGAGAAAGAAGTGTATTCTCGTCCGGCTGATGC
AAAAGACGTGCAAGGATACGGCACAAAGTTACAGAAAGAAGTCGAAGGAA
AGAAATCTTGGGTTGATCATCTCTTCCACAGGGTTTGGCCTCCGTCTTCT
ATCAACTACCGCTTTTGGCCCAACAACCCTCCTTCTTACCGAGCGGTGAA
TGAGGAGTAT
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