FC920459

Overview
NameFC920459
Unique NameFC920459
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_BACCR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=gpmI PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 75/226 (33.19%), Postives = 118/226 (52.21%), Query Frame = 2
Query:   35 FKSAVEAVKKLREQPNAN---DQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDR-VRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            +KSA E V    E   AN   D+++ P VIV+E+   V  I D DAV+ +NFR DR + +A+    EDF +FDR  + P I     + +  E  +  +    P  +D T GE +   G++    +ET K+ HVTFF++G R   F    EE + I S    T++++P+M   E+ +     I + +         N DMVGH+G +E T+ A +A DE +  +++A
Sbjct:  212 YKSAEECV----EDSYANGIYDEFVLPSVIVNEDNTPVATINDDDAVIFYNFRPDRAIQIARVFTNEDFREFDRGEKVPHIPEFVCMTHFSE-TVDGYVAFKPMNLDNTLGEVVAQAGLKQLRIAETEKYPHVTFFFSGGREAEFPG--EERILINSPKVATYDLKPEMSIYEVTDALVNEIENDKHDVIILNFANCDMVGHSGMMEPTIKAVEATDECLGKVVEA 430          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_BACC1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus cereus (strain ATCC 10987) GN=gpmI PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 75/226 (33.19%), Postives = 118/226 (52.21%), Query Frame = 2
Query:   35 FKSAVEAVKKLREQPNAN---DQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDR-VRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            +KSA E V    E   AN   D+++ P VIV+E+   V  I D DAV+ +NFR DR + +A+    EDF +FDR  + P I     + +  E  +  +    P  +D T GE +   G++    +ET K+ HVTFF++G R   F    EE + I S    T++++P+M   E+ +     I + +         N DMVGH+G +E T+ A +A DE +  +++A
Sbjct:  212 YKSAEECV----EDSYANGIYDEFVLPSVIVNEDNTPVATINDDDAVIFYNFRPDRAIQIARVFTNEDFREFDRGEKVPHIPEFVCMTHFSE-TVDGYVAFKPMNLDNTLGEVVAQAGLKQLRIAETEKYPHVTFFFSGGREAEFPG--EERILINSPKVATYDLKPEMSIYEVTDALVNEIENDKHDVIILNFANCDMVGHSGMMEPTIKAVEATDECLGKVVEA 430          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_BACAH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus thuringiensis (strain Al Hakam) GN=gpmI PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25
Identity = 75/226 (33.19%), Postives = 118/226 (52.21%), Query Frame = 2
Query:   35 FKSAVEAVKKLREQPNAN---DQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDR-VRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            +KSA E V    E   AN   D+++ P VIV+E+   V  I D DAV+ +NFR DR + +A+    EDF +FDR  + P I     + +  E  +  +    P  +D T GE +   G++    +ET K+ HVTFF++G R   F    EE + I S    T++++P+M   E+ +     I + +         N DMVGH+G +E T+ A +A DE +  +++A
Sbjct:  212 YKSAEECV----EDSYANGIYDEFVLPSVIVNEDNTPVATINDDDAVIFYNFRPDRAIQIARVFTNEDFREFDRGEKVPHIPEFVCMTHFSE-TVDGYVAFKPMNLDNTLGEVVAQAGLKQLRIAETEKYPHVTFFFSGGREAEFPG--EERILINSPKVATYDLKPEMSIYEVTDALVNEIENDKHDVIILNFANCDMVGHSGMMEPTIKAVEATDECLGKVVEA 430          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_SYMTH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Symbiobacterium thermophilum GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25
Identity = 77/226 (34.07%), Postives = 114/226 (50.44%), Query Frame = 2
Query:   29 HKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVR-FPKIRYAGMLQYDGELK-LPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            H   S  EAV++   +    D+++ P VI   +G+    + +GD V+ FNFR DR   L +AL    FD F R   +  +    M QYD     +P  +   P  +D   G+ +   G+R    +ET K+ HVT+F+NG     F    EE V +PS    T++++P+M A E+A  A K I   R         N DMVGHTG +EA + A +A DE +  ++DA
Sbjct:  213 HTAGSVAEAVERAYAR-GETDEFVQPTVIEGVDGR----VREGDGVIFFNFRPDRARQLVRALHETAFDGFKRPEGYRPVELVTMTQYDQTFTDIPVAF--GPQFVDVPMGQVVAEAGLRQLRIAETEKYAHVTYFFNGGEERVFPG--EERVLVPSPKVATYDLKPEMSAYEVAREAVKWIEEDRTDFIVLNFANPDMVGHTGVLEAAIRAVEAVDECLGQVVDA 429          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_PSEAB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25
Identity = 74/207 (35.75%), Postives = 112/207 (54.11%), Query Frame = 2
Query:   86 NDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGML-QYDGELKLPSHYLVSPPE-IDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            +D+++    +V    +AV  + DGDAV+  NFRADR   L++A     F +F R + P++    ML QY   +  P  +   PPE +    GEYL  +G      +ET K+ HVTFF++G R   ++   EE + IPS    T+++QP+M A E+ +R  +AI  +R+        N DMVGHTG  EA V A +  D  +  I++A
Sbjct:  232 SDEFVKATAVVPAGAEAVR-VEDGDAVIFMNFRADRARELSRAFVEPAFKEFPREQAPQLAGFVMLTQYAASIPAPCAF---PPEPLTNVLGEYLAKHGKTQLRIAETEKYAHVTFFFSGGREEPYEG--EERILIPSPKVATYDLQPEMSAPEVTDRIVEAIEQQRYDVIVVNYANGDMVGHTGVFEAAVKAVECLDTCMGRIVEA 432          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_AKKM8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25
Identity = 68/203 (33.50%), Postives = 108/203 (53.20%), Query Frame = 2
Query:   89 DQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGI-TFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDII 694
            D++L P +    N + V    D D V  FNFRADR   ++ A  Y +FD FDR   PK+ Y  + +YD   K PS  +    +++   G+ +   G      +ET K+ HVTFF+NG     F    E+ + +PS   + T++++P+M A E+A++   A+   ++        N DMVGHTG +EA + AC+A D A++  +
Sbjct:  235 DEFLKPGIFAYGNEQRVR---DNDVVFFFNFRADRARQMSDAFLYPEFDGFDREVTPKVHYVTLTEYDA--KYPSPIVFEQEQLNNIFGQIVSEAGKTQLRIAETEKYAHVTFFFNGGVETQFPG--EDRILVPSPREVATYDLKPQMSAAEVADKFVDAV--NKYDVVIMNFANGDMVGHTGFVEAGIAACEAVDSALEKCV 428          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_YERPS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pseudotuberculosis GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25
Identity = 70/206 (33.98%), Postives = 108/206 (52.43%), Query Frame = 2
Query:   86 NDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGML-QYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            ND+++ P VI    G+A   + +GD ++  NFRADR   + +     DFD F R +        ML +Y  ++K+   Y   P  +  T GE+L+ +       SET K+ HVTFF+NG     F    E+ + I S    T+++QP+M + E+ E+   AI S ++    C  PN DMVGHTGD +A V A +  D  ++ ++ A
Sbjct:  232 NDEFVKPTVI-QATGEADAAMNEGDTLIFMNFRADRARQITRTFVNADFDGFKRDKVVNFGDFIMLTEYAADIKVACAY--PPASLTNTFGEWLMKHDKTQLRISETEKYAHVTFFYNGGVEEPFKG--EDRILINSPKVATYDLQPEMSSAELTEKLVSAIGSGKYDVIICNYPNGDMVGHTGDYDAAVKAVETLDNCIEQVVAA 432          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_LARHH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Laribacter hongkongensis (strain HLHK9) GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25
Identity = 67/190 (35.26%), Postives = 100/190 (52.63%), Query Frame = 2
Query:  134 AVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTS-GEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            A  P+ DGDAV+  NFRADR   L  AL   +FD F   +     Y  + +Y  +    S  +  PP+  R   GEYL   G+R    +ET K+ HVT+F+NG     +    E+ + +PS    T+++QP+M A E+  R  +AI SR++    C   N DMVGHTG++ A + A +  D  +   ++A
Sbjct:  240 APAPMQDGDAVIFMNFRADRARELTSALTDPEFDGFSARQLRLSDYVTLTRYGADYASLS--IAYPPQTIRNGFGEYLASQGLRQLRIAETEKYPHVTYFFNGGEETVYPG--EDRILVPSPKVATYDLQPEMSAEEVTNRIVEAINSRQYQAIICNYANGDMVGHTGNLPAAIRAVETLDGCINRCVEA 425          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_BACME (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus megaterium GN=gpmI PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.705e-25
Identity = 75/223 (33.63%), Postives = 111/223 (49.78%), Query Frame = 2
Query:   35 FKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDR-VRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            + SA E VK   +     D+++ P VI  E+G  V  I D DAV+ +NFR DR + ++     EDF  FDR  + PK  +   L +  E  +  +    P  +D T GE L  N ++    +ET K+ HVTFF +G R   F    E  + I S    T++++P+M A E+ +     I   +         N DMVGH+G +E TV A +  DE +  I+DA
Sbjct:  213 YTSAEECVKDSYDN-GIYDEFVLPSVITKEDGSPVATIQDEDAVIFYNFRPDRAIQISNTFANEDFRSFDRGEKHPKHLHFVCLTHFSE-TVDGYVAFKPINLDNTLGEVLSQNNLKQLRIAETEKYPHVTFFMSGGREAEFPG--ETRILIDSPKVATYDLKPEMSAYEVTDALLAEIEGDKQDAILLNFANPDMVGHSGMLEPTVKAIETVDECLGKIVDA 431          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_DESVH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=gpmI PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.532e-25
Identity = 78/220 (35.45%), Postives = 108/220 (49.09%), Query Frame = 2
Query:   44 AVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIR-YAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            AVEA     E     D+++ P V+V E G  +G I DGD V  FNFRADR   L+       F+  DR   P +  +A M  YD  L LP  +   P  +D T GE + + G+R    +ET K+ HVT+F N  R   F       +  P D   T++++P+M A  + +   +      +    C + N DMVGHTG I A V AC+  D  V+ I DA
Sbjct:  218 AVEAAYAAGE----TDEFVKPRVVV-EGGSPIGTIRDGDGVFFFNFRADRARQLSHMFVDGTFEHGDRGHVPSLAGFATMTSYDPALGLPVAFDKQP--LDGTLGEVVANQGLRQLRIAETEKYAHVTYFLNCGREEPFPGEERRLLPSPRDVA-TYDLKPEMSAEAVTDTLLEEWAGGGYTLAVCNVANLDMVGHTGVIPAAVRACETVDACVRRIADA 429          
The following BLAST results are available for this feature:
BLAST of FC920459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
GPMI_BACCR1.586e-2533.192,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACC11.586e-2533.192,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACAH1.586e-2533.192,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYMTH2.071e-2534.072,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEAB2.071e-2535.752,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_AKKM82.071e-2533.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERPS2.705e-2533.982,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LARHH2.705e-2535.262,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACME2.705e-2533.632,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_DESVH3.532e-2535.452,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionC32008F09EF RVDevelop1 Citrus clementina cDNA clone C32008F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920459 ID=FC920459; Name=FC920459; organism=Citrus clementina; type=EST; length=701bp
GGGATGCCCAAGTTCTTGGAGACACTCACACAAGTTTAAGAGCGCCGTTG
AAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAGTACTTA
CCTCCATTTGTCATTGTTGATGAAAATGGAAAGGCTGTGGGTCCAATAGT
AGATGGTGATGCAGTTGTAACTTTCAACTTCCGAGCTGATCGAATGGTTA
TGCTTGCTAAGGCCCTTGAATATGAAGATTTTGACAAATTTGATCGAGTT
CGGTTCCCTAAAATCCGTTATGCTGGAATGCTTCAATATGATGGGGAGTT
GAAACTTCCCAGTCATTACCTTGTGTCTCCTCCAGAGATAGACAGAACAT
CTGGTGAATATTTAGTGCATAATGGTGTCCGTACTTTTGCTTGCAGTGAG
ACTGTCAAGTTTGGACATGTCACTTTCTTCTGGAATGGAAACCGCTCTGG
GTATTTCGACTCGAATTTGGAGGAATATGTGGAAATTCCTAGTGATTCTG
GAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGATTGCTGAG
AGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGGTACGTGTTA
CCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGCAACAG
TGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAAGATATCATTGATGCA
A
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