FC920459

Overview
NameFC920459
Unique NameFC920459
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_METFK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.001e-28
Identity = 68/183 (37.16%), Postives = 104/183 (56.83%), Query Frame = 2
Query:  152 DGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            DGD V+  NFR+DR   L  AL   DF+ F+R R PK+     L    + +  +  + +P EI  T GEY+  +G++    +ET K+ HVTFF+NG     F    E+ + +PS    T+++QP+M A E+ +R + AILSR++    C   N DMVGH+GD+ A++ A +  D  +  I+ A
Sbjct:  251 DGDVVIFVNFRSDRARQLTHALLDPDFEGFNRRRQPKLAGFYTLTLYDKAETRAKPIFAPVEIRNTFGEYVAQHGLKQLRIAETEKYPHVTFFFNGGEEQVFAG--EDRILVPSPKVATYDLQPEMSAYEVTDRLEAAILSRKYDAIICNYANCDMVGHSGDLSASIKAVETIDTCIARIVKA 431          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_GEOTN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.001e-28
Identity = 72/205 (35.12%), Postives = 112/205 (54.63%), Query Frame = 2
Query:   89 DQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDR-VRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            D+++ P VIV E+G  V  I D DA++ +NFR DR + ++     EDF +FDR  + PK  +   L +  E  +  +    P  +D T GE L  +G+R    +ET K+ HVTFF +G R   F    E+ + I S    T++++P+M A E+ E   K I + ++        N DMVGH+G +E T+ A +A DE +  ++DA
Sbjct:  230 DEFVLPSVIVREDGSPVATIQDNDAIIFYNFRPDRAIQISNTFTNEDFREFDRGPKHPKNLFFVCLTHFSE-TVKGYVAFKPTNLDNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEKFPG--EDRILINSPKVATYDLKPEMSAYEVTEALLKEIAADKYDAIILNYANPDMVGHSGMLEPTIKAVEAVDECLGKVVDA 431          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_PARD8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.458e-28
Identity = 79/225 (35.11%), Postives = 114/225 (50.67%), Query Frame = 2
Query:   32 KFKSAVEAVKKLREQ--PNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            K K A   VK + E       D+++ P V V ENGK V  I +GD V+ FN+R DR   L   L  +D  +      P ++Y  M  YD   K   H L     ++ T GE+L + G      +ET K+ HVTFF+NG R   FDS  EE + +PS    T++++P+M A E+ ++   AI +++F        N DMVGHTG  +A   A    D  + D ++A
Sbjct:  207 KGKQAECMVKAMEESYAEGVTDEFIKPIVHV-ENGKPVAVIEEGDVVIFFNYRNDRAKELTVVLTQQDMPEAGMHTIPGLQYFCMTPYDASFK-GVHILFDKENVNNTLGEFLANVGKTQLHIAETEKYAHVTFFFNGGRETPFDS--EERILVPSPKVATYDLKPEMSAFEVKDKLVDAINTKKFDFIVVNYANGDMVGHTGIYKAIEKAVVTIDACLHDTVEA 427          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_GEOKA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacillus kaustophilus GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.458e-28
Identity = 71/205 (34.63%), Postives = 113/205 (55.12%), Query Frame = 2
Query:   89 DQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDR-VRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            D+++ P VIV E+G+ V  I D DA++ +NFR DR + ++     EDF +FDR  + PK  +   L +  E  +  +    P  +D T GE L  +G+R    +ET K+ HVTFF +G R   F    E+ + I S    T++++P+M A E+ +   K I + ++        N DMVGH+G +E T+ A +A DE +  ++DA
Sbjct:  230 DEFVLPSVIVREDGRPVATIQDNDAIIFYNFRPDRAIQISNTFTNEDFREFDRGPKHPKHLFFVCLTHFSE-TVKGYVAFKPTNLDNTLGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEKFPG--EDRILINSPKVPTYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDA 431          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_BACST (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus stearothermophilus GN=gpmI PE=1 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 4.458e-28
Identity = 71/205 (34.63%), Postives = 113/205 (55.12%), Query Frame = 2
Query:   89 DQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDR-VRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            D+++ P VIV E+G+ V  I D DA++ +NFR DR + ++     EDF +FDR  + PK  +   L +  E  +  +    P  +D T GE L  +G+R    +ET K+ HVTFF +G R   F    E+ + I S    T++++P+M A E+ +   K I + ++        N DMVGH+G +E T+ A +A DE +  ++DA
Sbjct:  230 DEFVLPSVIVREDGRPVATIQDNDAIIFYNFRPDRAIQISNTFTNEDFREFDRGPKHPKHLFFVCLTHFSE-TVKGYVAFKPTNLDNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEKFPG--EDRILINSPKVPTYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDA 431          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_VIBF1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28
Identity = 77/222 (34.68%), Postives = 118/222 (53.15%), Query Frame = 2
Query:   35 FKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            F +AVE ++    +   ND+++    I  E G+    IVDGDAV+  N+RADR   + +      FD F R  FP I +  + QY  ++ L   +  +P  ++ T GE+L   G      SET K+ HVTFF+NG     F+    + V  P  +  T+++QP+M A E+ E+   AI S ++    C  PN DMVGHTG  +A V A ++ DE +  +++A
Sbjct:  215 FATAVEGLEAAYAREE-NDEFVQATEIKAE-GEESAAIVDGDAVIFMNYRADRARQITRTF-VPSFDGFTRNVFPAIDFVMLTQYAADIPLLCAF--APASLENTYGEWLSKEGKTQLRISETEKYAHVTFFFNGGIEDEFEGEERQLVASPKVA--TYDLQPEMSAPELTEKLVAAIKSGKYDAIVCNFPNCDMVGHTGVYDAAVKAVESLDECIGKVVEA 429          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_BACTN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacteroides thetaiotaomicron GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28
Identity = 75/223 (33.63%), Postives = 111/223 (49.78%), Query Frame = 2
Query:   38 KSAVEAVKKLREQ--PNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            K A + V+ ++E       D+++ P V    N    G I +GD V+ FN+R DR   L   L  +D  +      P ++Y  M  YD   K   H L     +  T GEY+   G+     +ET K+ HVTFF+NG R   FD+  E+ + +PS    T++++P+M A E+ ++   AI   ++        N DMVGHTG  EA   A  A D  VKD+I+A
Sbjct:  209 KKATDMVQAMQESYDEGVTDEFIKPIV----NANCDGTIKEGDVVIFFNYRNDRAKELTVVLTQQDMPEAGMHTIPGLQYYCMTPYDASFK-GVHILFDKENVANTLGEYIASKGLNQLHIAETEKYAHVTFFFNGGRETPFDN--EDRILVPSPKVATYDLKPEMSAYEVKDKLVDAINENKYDFIVVNFANGDMVGHTGIYEAIEKAVVAVDACVKDVIEA 424          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_VIBSL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio splendidus (strain LGP32) GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.604e-28
Identity = 74/205 (36.10%), Postives = 111/205 (54.15%), Query Frame = 2
Query:   86 NDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            ND+++    I  E G+    IVDGDAV+  N+RADR   + +A    DFD F R  FP I +  + QY  ++ L   +   P  ++ T GE+L   G      SET K+ HVTFF+NG +   F+    + V  P  +  T+++QP+M A E+ E+   AI   ++    C  PN DMVGHTG  +A V A ++ DE +  +++A
Sbjct:  231 NDEFVKATEIKAE-GEESAVIVDGDAVIFMNYRADRAREITRAF-VPDFDGFARNVFPAIDFVMLTQYAADIPLLCAF--PPASLENTYGEWLSKEGKTQLRISETEKYAHVTFFFNGGKEDEFEGEERQLVASPKVA--TYDLQPEMSAPELTEKLVAAIKGGKYDAIVCNFPNCDMVGHTGVYDAAVKAVESLDECLGKVVEA 429          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_VIBPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio parahaemolyticus GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.604e-28
Identity = 73/205 (35.61%), Postives = 112/205 (54.63%), Query Frame = 2
Query:   86 NDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            ND+++    I  E G+    + DGDAV+  N+RADR   + +A     FD F+R  FP I +  + QY  ++ L + +   P  ++ T GE+L   G      SET K+ HVTFF+NG     F+    + V  P  +  T+++QP+M + E+ E+   AI S ++    C  PN+DMVGHTG  EA   A +A DE+V  +++A
Sbjct:  231 NDEFVKATAIKAE-GQEDAIMQDGDAVIFMNYRADRARQITRAF-VPGFDGFERAVFPAINFVMLTQYAADIPLATAF--PPASLENTYGEWLSKQGQTQLRISETEKYAHVTFFFNGGVENEFEGEERQLVASPKVA--TYDLQPEMSSPELTEKLVAAIKSGKYDTIICNYPNADMVGHTGVYEAAEKAIEALDESVGKVVEA 429          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_CLOTE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium tetani GN=gpmI PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.604e-28
Identity = 77/219 (35.16%), Postives = 117/219 (53.42%), Query Frame = 2
Query:   41 SAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIID 697
            SAVEA++K  +  N  D+++ P VI+ ++GK  G I D D+++ FNFR DR   + +AL  +DFD F+R R  K+ +  M QYD  ++        P     T GEY+   G+     +ET K+ HVTFF+NG       +  E+   IPS    T++++P+M A E+ +     I S ++        N DMVGHTG  +A   A +  D+ V +I D
Sbjct:  215 SAVEAIEKSYKD-NTTDEFVLPTVIL-KDGKPTGTIKDEDSIIFFNFRPDRARQITRALNDKDFDGFERKRL-KLNFITMTQYDKTIE-NVRIAYKPQSYKNTLGEYVSSLGLNQLRIAETEKYAHVTFFFNGGVET--PNKGEDRALIPSPKVATYDLKPEMSAFEVKDEVINRIESNKYDMIILNFANPDMVGHTGVFDAAKTAIEVVDKCVGEISD 427          
The following BLAST results are available for this feature:
BLAST of FC920459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
GPMI_METFK2.001e-2837.162,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOTN2.001e-2835.122,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PARD84.458e-2835.112,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOKA4.458e-2834.632,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACST4.458e-2834.632,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBF15.822e-2834.682,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACTN5.822e-2833.632,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBSL7.604e-2836.102,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBPA7.604e-2835.612,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOTE7.604e-2835.162,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionC32008F09EF RVDevelop1 Citrus clementina cDNA clone C32008F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920459 ID=FC920459; Name=FC920459; organism=Citrus clementina; type=EST; length=701bp
GGGATGCCCAAGTTCTTGGAGACACTCACACAAGTTTAAGAGCGCCGTTG
AAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAGTACTTA
CCTCCATTTGTCATTGTTGATGAAAATGGAAAGGCTGTGGGTCCAATAGT
AGATGGTGATGCAGTTGTAACTTTCAACTTCCGAGCTGATCGAATGGTTA
TGCTTGCTAAGGCCCTTGAATATGAAGATTTTGACAAATTTGATCGAGTT
CGGTTCCCTAAAATCCGTTATGCTGGAATGCTTCAATATGATGGGGAGTT
GAAACTTCCCAGTCATTACCTTGTGTCTCCTCCAGAGATAGACAGAACAT
CTGGTGAATATTTAGTGCATAATGGTGTCCGTACTTTTGCTTGCAGTGAG
ACTGTCAAGTTTGGACATGTCACTTTCTTCTGGAATGGAAACCGCTCTGG
GTATTTCGACTCGAATTTGGAGGAATATGTGGAAATTCCTAGTGATTCTG
GAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGATTGCTGAG
AGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGGTACGTGTTA
CCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGCAACAG
TGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAAGATATCATTGATGCA
A
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