FC920459

Overview
NameFC920459
Unique NameFC920459
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_PHOPR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Photobacterium profundum GN=gpmI PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 9.931e-28
Identity = 76/206 (36.89%), Postives = 109/206 (52.91%), Query Frame = 2
Query:   86 NDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGML-QYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            ND+++    I  E G+    +VDGD V+  N+RADR   + +A E  DF  F R + P +    ML +Y   +KLP+ +   P  +  T GE+L   G +    SET K+ HVTFF+NG     FD      V  P  +  T+++QP+M A E+ E+   AI    F    C  PN DMVGHTG  +A V AC+A D  +  +++A
Sbjct:  231 NDEFVKATEIRAE-GQESAAMVDGDTVIFMNYRADRAREITRAFE-ADFTSFVRTQTPALAEFVMLTRYAANIKLPAAF--PPATLKNTLGEWLSKKGKKQLRISETEKYAHVTFFFNGGVEDEFDGETRSLVASPKVA--TYDLQPEMSAPELTEKLVAAIKGGEFDTIICNYPNGDMVGHTGVYDAAVKACEALDGCIGQVVEA 430          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_PSEMY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas mendocina (strain ymp) GN=gpmI PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27
Identity = 79/220 (35.91%), Postives = 116/220 (52.73%), Query Frame = 2
Query:   41 SAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            SAVE ++   E+  +++     FV     G  V  + DGDAVV  NFRADR   L +A     F +F+R R P++ +  + QY   +  P+ +  +P  +    GEYL  NG      +ET K+ HVTFF++G R   F+   EE + IPS    T++++P+M A E+ +R   AI ++R+        N DMVGHTG  EA V A +  D  V  I +A
Sbjct:  218 SAVEGLQAAYERGESDE-----FVKATTIGAPV-QVEDGDAVVFMNFRADRARELTRAFVEPGFQEFERKRAPQVGFVMLTQYAASIPAPAAF--APEALTNVLGEYLAKNGKTQLRIAETEKYAHVTFFFSGGREEPFEG--EERILIPSPDVATYDLKPEMSAPEVTDRIVDAIENQRYDVIIVNYANGDMVGHTGVFEAAVKAVETLDTCVGRITEA 427          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_ENT38 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Enterobacter sp. (strain 638) GN=gpmI PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27
Identity = 72/205 (35.12%), Postives = 110/205 (53.66%), Query Frame = 2
Query:   86 NDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            ND+++   VI  E G+A   + DGDA++  NFRADR   + +A    DFD F R +   + +  + +Y  ++K+P  Y   P  +  T GE++  +       SET K+ HVTFF+NG     F    E+ + I S    T+++QP+M + E+ E+   AI S ++    C  PN DMVGHTG +EA V A +  D  V+ +  A
Sbjct:  232 NDEFVKATVIRAE-GQADAAMEDGDALIFMNFRADRAREITRAFVNADFDGFARKKVVNLNFIMLTEYAADIKVPCAY--PPASLANTLGEWMAKHDKTQLRISETEKYAHVTFFFNGGVEEPFKG--EDRILINSPKVATYDLQPEMSSAELTEKLVAAITSGKYDTIICNYPNGDMVGHTGVMEAAVKAVETLDHCVEQVAKA 431          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_PSYIN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Psychromonas ingrahamii (strain 37) GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27
Identity = 74/224 (33.04%), Postives = 116/224 (51.79%), Query Frame = 2
Query:   29 HKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            H  +SA+  ++    + + ND+++   VI +        I DGDAV+  NFRADR   L       +F  F+R   P + +  + ++  ++  P+ +  S   +  T GE+L  +G      SET K+ HVTFF+NG     F    E+   I S S  T+++QP+M ++E+ E+   AI S ++    C  PN DMVGHTG  +A V AC+A D  V  ++ A
Sbjct:  214 HTAESALAGLENAYAR-DENDEFVKATVIGEP-----AAIEDGDAVLFMNFRADRARELTYTFTDSNFSGFERASVPNVHFVTLTEFADDITAPAAF--SSERLTNTLGEWLADHGKTQLRISETEKYAHVTFFFNGGVESEFKG--EDRTLIKSPSVATYDMQPEMSSIELTEKLVSAIKSTKYDVIICNYPNGDMVGHTGVYDAAVKACEAVDSCVGKVVAA 427          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_PSESM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas syringae pv. tomato GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27
Identity = 71/185 (38.38%), Postives = 98/185 (52.97%), Query Frame = 2
Query:  146 IVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            + DGDAVV  NFRADR   L +    +DF  F+R R PK+ Y  + QY   +  PS +      +    GEYL  NG      +ET K+ HVTFF++G R   F    EE + IPS    T+++QP+M A E+ ++   AI  +R+        N DMVGH+G +EA + A +  D  V  I DA
Sbjct:  247 VEDGDAVVFMNFRADRARELTRVFVEDDFKDFERARQPKVNYVMLTQYAASIPAPSAFAAG--SLKNVLGEYLADNGKTQLRIAETEKYAHVTFFFSGGREEPFPG--EERILIPSPKVATYDLQPEMSAPEVTDKIVDAIEHQRYDVIIVNYANGDMVGHSGIMEAAIKAVEYLDVCVGRITDA 427          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_BACFR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacteroides fragilis GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27
Identity = 76/223 (34.08%), Postives = 111/223 (49.78%), Query Frame = 2
Query:   38 KSAVEAVKKLREQ--PNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            K A + V+ ++E       D+++ P V    N    G I +GD V+ FN+R DR   L   L  +D  +      P ++Y  M  YD   K   H L     +  T GEYL  NG +    +ET K+ HVTFF+NG R   +D+  E+ + +PS    T++++P+M A E+ ++   AI   ++        N DMVGHTG  EA   A  A D  VKD I+A
Sbjct:  209 KKATDMVQAMQESYDEGVTDEFIKPIV----NAGVDGTIKEGDVVIFFNYRNDRAKELTVVLTQQDMPEAGMHTIPGLQYYCMTPYDASFK-GVHILFDKENVANTLGEYLAANGKKQLHIAETEKYAHVTFFFNGGRETPYDN--EDRILVPSPKVATYDLKPEMSAYEVKDKLVAAINENKYDFIVVNYANGDMVGHTGIYEAIEKAVVAVDACVKDTIEA 424          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_AERS4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Aeromonas salmonicida (strain A449) GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27
Identity = 68/189 (35.98%), Postives = 98/189 (51.85%), Query Frame = 2
Query:  134 AVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            A  P+ DGDA++  NFRADR   + +A    DF  F R   P + +  + +Y  ++K    Y   P  +  T GE+L   G      SET K+ HVTFF+NG     F     E V  P  +  T+++QP+M + E+ ++   AI S ++    C  PN DMVGHTG  +A V AC+A D  V  + +A
Sbjct:  243 AAAPMQDGDALIFMNFRADRAREITRAFVDSDFTGFARAATPALNFVMLTEYAADIKTACAY--PPTALVNTLGEWLAKQGKTQLRISETEKYAHVTFFFNGGEESCFTGEDREIVASPKVA--TYDLQPEMSSEELTDKLVAAIKSGKYDTIICNYPNGDMVGHTGVFDAAVKACEAVDHCVGRVTEA 427          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_VIBHB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.212e-27
Identity = 73/205 (35.61%), Postives = 111/205 (54.15%), Query Frame = 2
Query:   86 NDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            ND+++    I  E G+    + DGDAV+  N+RADR   + +A     FD F+R  FP I +  + QY  ++ L   +   P  ++ T GE+L   G      SET K+ HVTFF+NG     F+    + V  P  +  T+++QP+M + E+ E+   AI S ++    C  PN+DMVGHTG  EA   A +A DE+V  +++A
Sbjct:  231 NDEFVKATAIKAE-GQEDAIMQDGDAVIFMNYRADRARQITRAF-VPAFDGFERAVFPAINFVMLTQYAADIPLAIAF--PPASLENTYGEWLSKQGQTQLRISETEKYAHVTFFFNGGIENEFEGEERQLVASPKVA--TYDMQPEMSSPELTEKMVAAIKSGKYDTIICNYPNADMVGHTGVYEAAEQAIEALDESVGKVVEA 429          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_PSEU2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gpmI PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.212e-27
Identity = 70/185 (37.84%), Postives = 98/185 (52.97%), Query Frame = 2
Query:  146 IVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            + DGDAVV  NFRADR   L +    +DF  F+R R PK+ Y  + QY   +  PS +      +    GEYL  NG      +ET K+ HVTFF++G R   F    EE + IPS    T+++QP+M A E+ ++   AI  +R+        N DMVGH+G +EA + A +  D  V  I +A
Sbjct:  247 VEDGDAVVFMNFRADRARELTRVFVEDDFKDFERARQPKVNYVMLTQYAASIPAPSAFAAG--SLKNVLGEYLADNGKTQLRIAETEKYAHVTFFFSGGREEPFPG--EERILIPSPKVATYDLQPEMSAPEVTDKIVDAIEHQRYDVIVVNYANGDMVGHSGIMEAAIKAVECLDVCVGRIAEA 427          
BLAST of FC920459 vs. ExPASy Swiss-Prot
Match: GPMI_BACFN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=gpmI PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.212e-27
Identity = 76/223 (34.08%), Postives = 111/223 (49.78%), Query Frame = 2
Query:   38 KSAVEAVKKLREQ--PNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDKFDRVRFPKIRYAGMLQYDGELKLPSHYLVSPPEIDRTSGEYLVHNGVRTFACSETVKFGHVTFFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPKMKALEIAERAKKAILSRRFHQGTCYLPNSDMVGHTGDIEATVVACKAADEAVKDIIDA 700
            K A + V+ ++E       D+++ P V    N    G I +GD V+ FN+R DR   L   L  +D  +      P ++Y  M  YD   K   H L     +  T GEYL  NG +    +ET K+ HVTFF+NG R   +D+  E+ + +PS    T++++P+M A E+ ++   AI   ++        N DMVGHTG  EA   A  A D  VKD I+A
Sbjct:  209 KKATDMVQAMQESYDEGVTDEFIKPIV----NAGVDGTIKEGDVVIFFNYRNDRAKELTVVLTQQDMPEAGMHTIPGLQYYCMTPYDASFK-GVHILFDKENVVNTLGEYLAANGKKQLHIAETEKYAHVTFFFNGGRETPYDN--EDRILVPSPKVATYDLKPEMSAYEVKDKLVAAINENKYDFIVVNYANGDMVGHTGIYEAIEKAVVAVDACVKDTIEA 424          
The following BLAST results are available for this feature:
BLAST of FC920459 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 266
Match NameE-valueIdentityDescription
GPMI_PHOPR9.931e-2836.892,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEMY1.297e-2735.912,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ENT381.297e-2735.122,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSYIN1.694e-2733.042,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSESM1.694e-2738.382,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACFR1.694e-2734.082,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_AERS41.694e-2735.982,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBHB2.212e-2735.612,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEU22.212e-2737.842,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACFN2.212e-2734.082,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionC32008F09EF RVDevelop1 Citrus clementina cDNA clone C32008F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920459 ID=FC920459; Name=FC920459; organism=Citrus clementina; type=EST; length=701bp
GGGATGCCCAAGTTCTTGGAGACACTCACACAAGTTTAAGAGCGCCGTTG
AAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAGTACTTA
CCTCCATTTGTCATTGTTGATGAAAATGGAAAGGCTGTGGGTCCAATAGT
AGATGGTGATGCAGTTGTAACTTTCAACTTCCGAGCTGATCGAATGGTTA
TGCTTGCTAAGGCCCTTGAATATGAAGATTTTGACAAATTTGATCGAGTT
CGGTTCCCTAAAATCCGTTATGCTGGAATGCTTCAATATGATGGGGAGTT
GAAACTTCCCAGTCATTACCTTGTGTCTCCTCCAGAGATAGACAGAACAT
CTGGTGAATATTTAGTGCATAATGGTGTCCGTACTTTTGCTTGCAGTGAG
ACTGTCAAGTTTGGACATGTCACTTTCTTCTGGAATGGAAACCGCTCTGG
GTATTTCGACTCGAATTTGGAGGAATATGTGGAAATTCCTAGTGATTCTG
GAATTACTTTCAATGTACAGCCCAAGATGAAGGCTTTGGAGATTGCTGAG
AGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGGTACGTGTTA
CCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGCAACAG
TGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAAGATATCATTGATGCA
A
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