FC920462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_SPIOL (ATP-dependent Clp protease proteolytic subunit OS=Spinacia oleracea GN=clpP PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.381e-28 Identity = 59/128 (46.09%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_COFAR (ATP-dependent Clp protease proteolytic subunit OS=Coffea arabica GN=clpP PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.109e-28 Identity = 59/128 (46.09%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQAVDSEISNQLIGLMIYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_LACSA (ATP-dependent Clp protease proteolytic subunit OS=Lactuca sativa GN=clpP PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.304e-28 Identity = 58/128 (45.31%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+K +Y++IN PGG V P +A+YDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDTKDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_TOBAC (ATP-dependent Clp protease proteolytic subunit OS=Nicotiana tabacum GN=clpP PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.927e-28 Identity = 58/128 (45.31%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_POPTR (ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa GN=clpP PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.927e-28 Identity = 58/128 (45.31%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R PGE S W+D++N LYRER++F+GQ+ID E SNQ++ M+YL + + K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRNPGEDSSNWIDVYNRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_POPAL (ATP-dependent Clp protease proteolytic subunit OS=Populus alba GN=clpP PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.927e-28 Identity = 58/128 (45.31%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R PGE S W+D++N LYRER++F+GQ+ID E SNQ++ M+YL + + K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRNPGEDSSNWIDVYNRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_NICTO (ATP-dependent Clp protease proteolytic subunit OS=Nicotiana tomentosiformis GN=clpP PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.927e-28 Identity = 58/128 (45.31%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_NICSY (ATP-dependent Clp protease proteolytic subunit OS=Nicotiana sylvestris GN=clpP PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.927e-28 Identity = 58/128 (45.31%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_LEPVR (ATP-dependent Clp protease proteolytic subunit OS=Lepidium virginicum GN=clpP PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.927e-28 Identity = 58/128 (45.31%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ++D E SNQ+++ M+YL D+K +Y++IN PGG V +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQDVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_OLIPU (ATP-dependent Clp protease proteolytic subunit OS=Olimarabidopsis pumila GN=clpP PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.046e-28 Identity = 58/128 (45.31%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+K +Y++IN PGG V +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQP 128 The following BLAST results are available for this feature:
BLAST of FC920462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920462 ID=FC920462; Name=FC920462; organism=Citrus clementina; type=EST; length=585bpback to top |