FC920462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_AETCO (ATP-dependent Clp protease proteolytic subunit OS=Aethionema cordifolium GN=clpP PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.015e-27 Identity = 57/128 (44.53%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D + SNQ+++ M+YL D+K +Y++IN PGG V +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTDISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_SOYBN (ATP-dependent Clp protease proteolytic subunit OS=Glycine max GN=clpP PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.632e-27 Identity = 56/128 (43.75%), Postives = 82/128 (64.06%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG P+V +R+PGE WVD++N LYRER++F+GQ +D E SNQ+++ M+YL +++K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPRVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLISLMVYLSIEEENKDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFLLAGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_NANDO (ATP-dependent Clp protease proteolytic subunit OS=Nandina domestica GN=clpP PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.632e-27 Identity = 58/128 (45.31%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++K +Y++IN PGG V P +AIYDTMQ + V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_GOSHI (ATP-dependent Clp protease proteolytic subunit OS=Gossypium hirsutum GN=clpP PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.632e-27 Identity = 58/128 (45.31%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDTKDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_GOSBA (ATP-dependent Clp protease proteolytic subunit OS=Gossypium barbadense GN=clpP PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.632e-27 Identity = 58/128 (45.31%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDTKDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNSC (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9605) GN=clpP3 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.632e-27 Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D SK +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A R A+P SRI + P Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNS9 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9902) GN=clpP3 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.632e-27 Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D SK +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A R A+P SRI + P Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNPX (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain WH8102) GN=clpP3 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.632e-27 Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D SK +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A R A+P SRI + P Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMM (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP2 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.632e-27 Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIGTP V YR PG +WVD++ L ER++F+GQ + + +N ++A MLYLDS D +K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A R A+P SRI + P Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVSDGVANSLVAQMLYLDSEDSTKPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPHSRIMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMA (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus GN=clpP2 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.632e-27 Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIGTP V YR PG +WVD++ L ER++F+GQ + + +N ++A MLYLDS D +K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A R A+P SRI + P Sbjct: 1 MPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVTDGVANSLVAQMLYLDSEDSTKPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLSAGTKNKRLALPHSRIMIHQP 128 The following BLAST results are available for this feature:
BLAST of FC920462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920462 ID=FC920462; Name=FC920462; organism=Citrus clementina; type=EST; length=585bpback to top |