FC920462
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_ADICA (ATP-dependent Clp protease proteolytic subunit OS=Adiantum capillus-veneris GN=clpP PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.706e-26 Identity = 54/128 (42.19%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R PGE WVD++N LYRER++F+GQ +D+E +NQ++ M+YL+S D +K +Y+Y+N PGG V +++YD MQ + V T C+G A R A+P +R+ + P Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNSEDQAKDMYLYVNSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILAGGEITRRIALPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNJA (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.706e-26 Identity = 61/128 (47.66%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG P+V YR PGE QW+ L + LY+ER++FIG+ ID+ +N I+ MLYL+S D K + MYIN PGG VT +AIYDTM +K + T CVG A R A+P SRI L P Sbjct: 1 MPIGVPRVPYRLPGEPYSQWISLDDRLYQERILFIGEPIDDNLANTIVGVMLYLNSQDPQKDIVMYINSPGGSVTAGMAIYDTMNHVKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPHSRIMLHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_CITSI (ATP-dependent Clp protease proteolytic subunit OS=Citrus sinensis GN=clpP PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.228e-26 Identity = 55/128 (42.97%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV YR+PG+ WVD++N LYRER++F+GQ ++ + SNQ++ M+YL +++K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPYRSPGDKHPSWVDIYNRLYRERLLFLGQMVESDISNQLIGIMVYLSIENETKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_ARAHI (ATP-dependent Clp protease proteolytic subunit OS=Arabis hirsuta GN=clpP PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.228e-26 Identity = 57/128 (44.53%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+K +Y++IN PGG V +AIYDTMQ ++ V T +G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTIGMGLAASIASFILVGGAITKRIAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_ZYGCR (ATP-dependent Clp protease proteolytic subunit OS=Zygnema circumcarinatum GN=clpP PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.801e-26 Identity = 53/128 (41.41%), Postives = 80/128 (62.50%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R PGE W+D++N LYR+R++F+GQ++D+E +NQ++ M+YL+ + SK +YMYIN PGG V +++YD MQ + V T C+G A R A+P +R+ + P Sbjct: 1 MPIGVPKVPFRIPGEEDASWIDVYNRLYRDRLLFLGQDVDDEIANQLIGIMIYLNGENQSKDMYMYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEISKRLALPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_NYMAL (ATP-dependent Clp protease proteolytic subunit OS=Nymphaea alba GN=clpP PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.483e-26 Identity = 55/128 (42.97%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D+++ +Y++IN PGG V P +AIYD MQ + V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDIYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNTRDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_NUPAD (ATP-dependent Clp protease proteolytic subunit OS=Nuphar advena GN=clpP PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.483e-26 Identity = 55/128 (42.97%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D+++ +Y++IN PGG V P +AIYD MQ + V T C+G A R A P +R+ + P Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDIYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNTRDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=clpP PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.483e-26 Identity = 54/128 (42.19%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MP+G PKV +R PGE WVDL+N LYR+R++F+GQ+++ E SNQI+ M+YL D +K Y++IN PGG V P + ++DTMQ + V T C+G A R A P +R+ + P Sbjct: 1 MPVGVPKVPFRLPGEEDASWVDLYNRLYRQRLLFLGQDVNNEISNQIMGLMVYLSIEDGTKDQYLFINSPGGSVIPGVGLFDTMQFVSPDVHTICIGLAASMGSFILVGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_AMBTC (ATP-dependent Clp protease proteolytic subunit OS=Amborella trichopoda GN=clpP PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.483e-26 Identity = 55/128 (42.97%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MP+G PKV +R+PGE WVD++N L+RER++F+GQ ++ E SNQI+ M+YL DD++ +Y++IN PGG V P +AIYD MQ + V T C+G A R A P +R+ + P Sbjct: 1 MPVGVPKVPFRSPGEEDATWVDIYNRLHRERLLFLGQEVEGEISNQIVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDAMQFVPPDVHTICMGLAASMGSFVLAGGEITKRLAFPHARVMIHQP 128
BLAST of FC920462 vs. ExPASy Swiss-Prot
Match: CLPP_PIPCE (ATP-dependent Clp protease proteolytic subunit OS=Piper cenocladum GN=clpP PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.444e-25 Identity = 56/128 (43.75%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 201 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHXXXXXXXXXXXXNRSAMPLSRIALDSP 584 MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQI+ M+YL D ++ +Y++IN PGG V P +AIYDTMQ + V T C+G A R A P + + + P Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDGTRDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPHAWVMIHQP 128 The following BLAST results are available for this feature:
BLAST of FC920462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920462 ID=FC920462; Name=FC920462; organism=Citrus clementina; type=EST; length=585bpback to top |