FC920467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920467 vs. ExPASy Swiss-Prot
Match: YSL8_ORYSJ (Probable metal-nicotianamine transporter YSL8 OS=Oryza sativa subsp. japonica GN=YSL8 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40 Identity = 93/203 (45.81%), Postives = 122/203 (60.10%), Query Frame = 2 Query: 62 EVEVSEPLIEKIAAVNDEEEEADQPIPEWKDQITIRGLVASAIMGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFLVKSWTSFLSKLGFSIKPFTRQENTVIQTCVVACYXXXXXXXXXXXXXXMDERTYQLIGADYPGNRAE-DVKNPGLGWMIXXXXXXXXXXXXXXXPLRKVMILDYKLTYPSGTATAMLINSFHTNTGA 667 E EV+ +I +V+ E+ + +P W +QIT+R LV SA++GT I KLNLT GI+PSLNV+AGLL FFL+K+WTS L + G KPFTRQENTV+QTCV++C M ++ + G D + +V+ P LG +I PLRK+MI+ YKLTYPSG+ATA LINSFHT GA Sbjct: 10 EAEVTREVI----SVSTEKAFEGKALPAWSEQITVRSLVVSAVLGTFLSFIVMKLNLTSGIVPSLNVSAGLLAFFLMKTWTSALERCGVFPKPFTRQENTVVQTCVISCSSIAFSGGFGTYILGMSKKIAE--GFDEAEAKTSINVEEPSLGRLIAFLFLVSFVGLFSIVPLRKIMIISYKLTYPSGSATAHLINSFHTPQGA 206
BLAST of FC920467 vs. ExPASy Swiss-Prot
Match: YSL18_ORYSJ (Probable metal-nicotianamine transporter YSL18 OS=Oryza sativa subsp. japonica GN=YSL18 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.253e-35 Identity = 79/182 (43.41%), Postives = 104/182 (57.14%), Query Frame = 2 Query: 131 QPIPEWKDQITIRGLVASAIMGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFLVKSWTSFLSKLGFSIKPFTRQENTVIQTCVVACYXXXXXXXXXXXXXXMDERTYQLIGADYPGNRAEDVKNPGLGWMIXXXXXXXXXXXXXXXPLRKVMILDYKLTYPSGTATAMLINSFHTNTGAELA 676 QP+P W +Q+T+R +VAS +G + L T GIIPSLN++AGLLGFFL+K+WT L +LG +PFTRQEN V+QTCVVAC MD +T + + + V P G M+ P+RK MI+ ++LT+PSG+ATA LINSFHT GA A Sbjct: 20 QPVPPWTEQVTLRAVVASVALGVALSSVMMNLVFTSGIIPSLNISAGLLGFFLLKAWTRLLDQLGSPGRPFTRQENAVVQTCVVACASMTYSGGFGSYLLAMDRKTAEKTSTG--DDSSASVSEPEFGRMMAFFFLVSFVGLLAIVPMRKTMIIRHRLTFPSGSATAHLINSFHTPHGARQA 199
BLAST of FC920467 vs. ExPASy Swiss-Prot
Match: YSL1_ORYSJ (Probable metal-nicotianamine transporter YSL1 OS=Oryza sativa subsp. japonica GN=YSL1 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.013e-33 Identity = 71/184 (38.59%), Postives = 100/184 (54.35%), Query Frame = 2 Query: 125 ADQPIPEWKDQITIRGLVASAIMGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFLVKSWTSFLSKLGFSIKPFTRQENTVIQTCVVACYXXXXXXXXXXXXXXMDERTYQLIGADYPGNRAEDVKNPGLGWMIXXXXXXXXXXXXXXXPLRKVMILDYKLTYPSGTATAMLINSFHTNTGAELA 676 A QP P W Q+T+R + S ++GTLF + + LT G +PS N++A LL FF++KSWT +++ G + +PFTRQEN V+QTCV++C M+E + G G +V G ++ PLR MI+DYKL YPSG+A A ++NSFHT GA A Sbjct: 21 AGQPPPPWWQQVTVRAVAVSVVLGTLFSFMAMRTGLTAGFVPSFNMSASLLSFFIIKSWTRLMARCGVASQPFTRQENVVVQTCVISCATLSIYGGFTSYLLAMNETVAKAAGG---GTDGRNVYTLHTGKIVAFLFLVTFSSLFCTLPLRNTMIVDYKLIYPSGSAVAGIVNSFHTPKGATKA 201
BLAST of FC920467 vs. ExPASy Swiss-Prot
Match: YSL17_ORYSJ (Probable metal-nicotianamine transporter YSL17 OS=Oryza sativa subsp. japonica GN=YSL17 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.722e-30 Identity = 75/203 (36.95%), Postives = 108/203 (53.20%), Query Frame = 2 Query: 104 VNDEEEEAD------------QPIPEWKDQITIRGLVASAIMGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFLVKSWTSFLSKLGFSIKPFTRQENTVIQTCVVACYXXXXXXXXXXXXXXMDERTYQLIGADYPGNRAEDVKNPGLGWMIXXXXXXXXXXXXXXXPLRKVMILDYKLTYPSGTATAMLINSFHTNTGAELA 676 V+D+ E+A +P+P + +T R S ++G + ++ +LNLT G++PSL V AGLLGFFL + W L +G S PFTRQENT+IQ VV+C M ++ + G+ +V+ P +G +I PLRK+MI+ ++LT+PSGTATA LINSFHT GA+ A Sbjct: 13 VDDDREDASSVASSTERAFEGEPLPSLGETVTARSAAVSGVLGAVVSVVAMRLNLTSGLLPSLGVPAGLLGFFLARVWIRALDVVGVSHLPFTRQENTLIQIAVVSCSTIAFSGGFGTYILGMSGKS---ANEGHIGSHGRNVEEPNIGRVIAFLFLVNFSGLFIIVPLRKMMIIRHRLTFPSGTATAHLINSFHTPHGAKQA 212
BLAST of FC920467 vs. ExPASy Swiss-Prot
Match: YSL7_ORYSJ (Probable metal-nicotianamine transporter YSL7 OS=Oryza sativa subsp. japonica GN=YSL7 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27 Identity = 75/209 (35.89%), Postives = 103/209 (49.28%), Query Frame = 2 Query: 77 EPLIEKIAAVNDEEEEADQPIPEWKDQITIRGLVASAIMGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFLVKSWTSFLSKLGFSIKPFTRQENTVIQTCVVACYXXXXXXXXXXXXXXMDERTYQLIGADYPGNRAEDVKNPGLGWMIXXXXXXXXXXXXXXXPLRKVMILDYKLTYPSGTATAMLINSFHTNTGAELAGKASQCLGK 703 EP+ + ++ E +P+P + IT R +V S I+ I+ K+ L+ G IPS ++ AGLLGF + ++ L + PFTRQENT+IQTCVVAC M ++ A N +V+ P MI P RKVMI+ ++LT+PSGTATA LINSFHT G + A K L K Sbjct: 2 EPVNDFQEGISTEHAFEAEPVPSLSETITPRSMVVSFILSVTLSIVAMKVTLSSGFIPSFSIPAGLLGFCVSRASIRILDYFAVAQLPFTRQENTIIQTCVVACTSITFTGGFGTYILAMGKK-----AAVGDVNAQNNVEEPSFARMITFLFLISFAGMFIIMPFRKVMIIRHRLTFPSGTATAHLINSFHTPQGVKQARKQVTLLFK 205
BLAST of FC920467 vs. ExPASy Swiss-Prot
Match: YSL3_ORYSJ (Probable metal-nicotianamine transporter YSL3 OS=Oryza sativa subsp. japonica GN=YSL3 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 8.032e-25 Identity = 63/196 (32.14%), Postives = 100/196 (51.02%), Query Frame = 2 Query: 89 EKIAAVNDEEEEADQPIPEWKDQITIRGLVASAIMGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFLVKSWTSFLSKLGFSIKPFTRQENTVIQTCVVACYXXXXXXXXXXXXXXMDERTYQLIGADYPGNRAEDVKNPGLGWMIXXXXXXXXXXXXXXXPLRKVMILDYKLTYPSGTATAMLINSFHTNTGAELA 676 + ++A + E QP PE+++ +T R + + ++ + C + ++ +T GI+P+LN+ A +L FFL+K L GF + PFTRQEN + TC++ C M + + AD P R + + + +G I P +VMI+DYKL +P+GT A LINSFHT GA +A Sbjct: 7 DPMSATSVEAVFEKQPSPEFRELVTPRAMAVAVVLSVVICFVGMRIQMTAGIVPALNMPASILSFFLLKWLIRLLQSCGFPMLPFTRQENMFLLTCIITCLNLALTSGFATNIIGMTSTVARSL-ADDPDPR-DIMDHVPIGKWIVYLFLVGMTGVLINVPFNQVMIIDYKLLFPTGTVIAQLINSFHTPEGAYVA 200
BLAST of FC920467 vs. ExPASy Swiss-Prot
Match: YSL4_ORYSJ (Probable metal-nicotianamine transporter YSL4 OS=Oryza sativa subsp. japonica GN=YSL4 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.264e-19 Identity = 54/205 (26.34%), Postives = 96/205 (46.83%), Query Frame = 2 Query: 62 EVEVSEPLIEKIAAVNDEEEEADQPIPEWKDQITIRGLVASAIMGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFLVKSWTSFLSKLGFSIKPFTRQENTVIQTCVVACYXXXXXXXXXXXXXXMDERTYQLIGADYPGNRAEDVKNPGLGWMIXXXXXXXXXXXXXXXPLRKVMILDYKLTYPSGTATAMLINSFHTNTGAELA 676 + + +P + + A ++ P+P + +T R + + ++G +FC + ++ + G +P+LN+ +L FFL+K L K ++ PFTRQEN + TCV+ C M + + D + + + G +I PL ++MI+DY+L +P+G+ LINSFHT GA +A Sbjct: 2 DASIGDPRLTSVEAAFEKN-----PLPGFSWLVTPRAMAVAVLLGIVFCFVGMRIQMMTGFVPALNMPVTVLSFFLLKVLARQLQKWRLTVVPFTRQENMFLITCVITCLNLAITGGFATALTGMGTIVAKTLADDL--DPRDIIDYIPTGKLIIYFFLIGMAGVLSNIPLNQIMIIDYQLLFPTGSVIGHLINSFHTPEGAYIA 199 The following BLAST results are available for this feature:
BLAST of FC920467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920467 ID=FC920467; Name=FC920467; organism=Citrus clementina; type=EST; length=712bpback to top |