FC920479
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODF_PSEPK (Superoxide dismutase [Fe] OS=Pseudomonas putida (strain KT2440) GN=sodB PE=3 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 3.412e-22 Identity = 57/133 (42.86%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVPK 597 F+L P PY +AL+PH+SK+TLE+H KHH YV NLN + GTE +GK+LE++V +S G + FNNAAQ WNH F+W I FGS FGSGW WLV K Sbjct: 3 FELPPLPYAHDALQPHISKETLEYHHDKHHNTYVVNLNNLVPGTEF-EGKTLEEIVKSS--SGGI---FNNAAQVWNHTFYWNCLSPNGGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKK 129
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODF_PHOLE (Superoxide dismutase [Fe] OS=Photobacterium leiognathi GN=sodB PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.412e-22 Identity = 54/131 (41.22%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 F+L P+ +NALEPH+S++TLE+H+GKHH YV LN + GTEL + KSLE+++ S FNNAAQ WNH F+W IE+ FGS FGS W WLV Sbjct: 2 FELPALPFAMNALEPHISQETLEYHYGKHHNTYVVKLNGLVEGTELAE-KSLEEIIKTSTG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGEVAAAIEKAFGSFAEFKAKFTDSAINNFGSSWTWLV 126
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.819e-22 Identity = 54/131 (41.22%), Postives = 68/131 (51.91%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 ++L P+ AL P+++K+TLEFH KHH AYV+N N + T+L DG+ +E V+ A FNNAAQAWNH F+W I DFGS TQFGSGWAWLV Sbjct: 3 YELPALPFDYTALAPYITKETLEFHHDKHHAAYVNNYNNAVKDTDL-DGQPIEAVIKAIAGDASKAGLFNNAAQAWNHSFYWNSIKPNGGGAPTGALADKIAADFGSFENFVTEFKQAAATQFGSGWAWLV 132
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODF_SALTY (Superoxide dismutase [Fe] OS=Salmonella typhimurium GN=sodB PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.296e-21 Identity = 56/131 (42.75%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 F+L PY +AL PH+S +TLE+H+GKHH+ YV NLN I GT +GKSLE++V S +G + FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIVRTS--EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAIKNFGSGWTWLV 127
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODF_SALTI (Superoxide dismutase [Fe] OS=Salmonella typhi GN=sodB PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.296e-21 Identity = 56/131 (42.75%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 F+L PY +AL PH+S +TLE+H+GKHH+ YV NLN I GT +GKSLE++V S +G + FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIVRTS--EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAIKNFGSGWTWLV 127
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODF_SHIFL (Superoxide dismutase [Fe] OS=Shigella flexneri GN=sodB PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.888e-21 Identity = 53/131 (40.46%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSSEG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV 127
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODF_ECOLI (Superoxide dismutase [Fe] OS=Escherichia coli (strain K12) GN=sodB PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.888e-21 Identity = 53/131 (40.46%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSSEG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV 127
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODF_ECOL6 (Superoxide dismutase [Fe] OS=Escherichia coli O6 GN=sodB PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.888e-21 Identity = 53/131 (40.46%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSSEG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV 127
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODF_ECO57 (Superoxide dismutase [Fe] OS=Escherichia coli O157:H7 GN=sodB PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.888e-21 Identity = 53/131 (40.46%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 F+L PY +AL PH+S +T+E+H+GKHH+ YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV Sbjct: 3 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAF-EGKSLEEIIRSSEG-----GVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV 127
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODF_BORPE (Superoxide dismutase [Fe] OS=Bordetella pertussis GN=sodB PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.888e-21 Identity = 56/131 (42.75%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 205 LKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVPK 597 L P PY L+AL P +SK+TLEFH+GKHH+ YV NLN I GTE + SLE++V S FNNAAQ WNH F+W I+ +GS FGSGW WLV K Sbjct: 5 LPPLPYALDALAPRISKETLEFHYGKHHQTYVTNLNNLIPGTEF-ENLSLEEIVKKSSG-----GVFNNAAQVWNHTFYWNSLSPNGGGEPSGALADAIKAKWGSVDAFKEAFNKSAAGNFGSGWTWLVKK 129 The following BLAST results are available for this feature:
BLAST of FC920479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920479 ID=FC920479; Name=FC920479; organism=Citrus clementina; type=EST; length=675bpback to top |