FC920479
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODM2_STAA3 (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain USA300) GN=sodM PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11 Identity = 43/133 (32.33%), Postives = 60/133 (45.11%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 F L PY +ALEP++ + T+EFH KHH YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV Sbjct: 3 FKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLV 132
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODM_THET8 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=sodA PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11 Identity = 44/140 (31.43%), Postives = 56/140 (40.00%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVPKPIIEL 612 F L YP ALEPH+ T+E H KHH AYV NLN + G +E ++ +A+ + NN NH FW I+ FG +FGSGWAWLV P +L Sbjct: 5 FKLPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEKYPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDPFGKL 144
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODM_THET2 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=sodA PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11 Identity = 44/140 (31.43%), Postives = 56/140 (40.00%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVPKPIIEL 612 F L YP ALEPH+ T+E H KHH AYV NLN + G +E ++ +A+ + NN NH FW I+ FG +FGSGWAWLV P +L Sbjct: 5 FKLPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEKYPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDPFGKL 144
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODM_ENTFA (Superoxide dismutase [Fe] OS=Enterococcus faecalis GN=sodA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11 Identity = 48/135 (35.56%), Postives = 62/135 (45.93%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQI-VGTELGDGKSLEDVVIASYN--KGDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 + L PY +ALEP++ +T+ H KHH YV NLN I ELG+ KS+E+ +I+ N D+ A NN NH FFW I+ FGS +FGSGWAWLV Sbjct: 3 YTLPELPYAYDALEPYIDVETMHLHHDKHHNTYVTNLNAAIEKHPELGE-KSVEN-LISDMNAIPEDIRTAVRNNGGGHANHTFFWEIMAPNAGGQPTGAIKEAIDETFGSFDEMKAAFKTAATGRFGSGWAWLV 135
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODM_THEAQ (Superoxide dismutase [Mn] OS=Thermus aquaticus GN=sodA PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.539e-11 Identity = 43/140 (30.71%), Postives = 54/140 (38.57%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVPKPIIEL 612 F L YP ALEPH+ T+E H KHH AYV NLN + G +E ++ + + NN NH FW I+ FG +FGSGWAWLV P +L Sbjct: 5 FKLPELGYPYEALEPHIDARTMEIHHQKHHGAYVTNLNAALEKYPYLQGAEVETLLRHLTALPADIQAAVRNNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFAALKEKLTQAAMGRFGSGWAWLVKDPFGKL 144
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODM_LISIV (Superoxide dismutase [Mn] OS=Listeria ivanovii GN=sodA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.539e-11 Identity = 42/133 (31.58%), Postives = 57/133 (42.86%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 ++L PY +ALEP+ K+T+E H+ KHH YV LN+ + G EL E V ++ A N+ NH FW IE +FG+ +FGSGWAWLV Sbjct: 3 YELPKLPYTYDALEPNFDKETMEIHYTKHHNIYVTKLNEAVSGHAELASKPGEELVANLDSVPEEIRGAVRNHGGGHANHTLFWSSLSPNGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLV 135
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODM_PASMU (Superoxide dismutase [Mn] OS=Pasteurella multocida GN=sodA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11 Identity = 45/126 (35.71%), Postives = 54/126 (42.86%), Query Frame = 1 Query: 220 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 Y +ALEPH T+E H KHH+AYV+N N + EL G + + + D L A NN NH FW I RDFGS T+FGSGWAWLV Sbjct: 10 YAYDALEPHFDAMTMEIHHSKHHQAYVNNANAALENLPELAQGCPGQLLTKLAEVPADKLTAIRNNVGGHLNHSLFW--KSLKKGTTLQGALKDAIVRDFGSVEAFQAEFEKAAATRFGSGWAWLV 133
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODM_LACLM (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=sodA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11 Identity = 44/136 (32.35%), Postives = 59/136 (43.38%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL---IERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 F L PY NALEP + T+ H GKHH+ YV+NLN I D SLE+++ +++ + NN NH FW + I ++FGS +FGSGWAWLV Sbjct: 3 FTLPELPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLV 138
BLAST of FC920479 vs. ExPASy Swiss-Prot
Match: SODM_LACLA (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. lactis GN=sodA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11 Identity = 44/136 (32.35%), Postives = 59/136 (43.38%), Query Frame = 1 Query: 199 FDLKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL---IERDFGSXXXXXXXXXXXXXTQFGSGWAWLV 591 F L PY NALEP + T+ H GKHH+ YV+NLN I D SLE+++ +++ + NN NH FW + I ++FGS +FGSGWAWLV Sbjct: 3 FTLPELPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLV 138 The following BLAST results are available for this feature:
BLAST of FC920479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920479 ID=FC920479; Name=FC920479; organism=Citrus clementina; type=EST; length=675bpback to top |