FC920488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 7.126e-79 Identity = 135/197 (68.53%), Postives = 160/197 (81.22%), Query Frame = 3 Query: 105 VALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 ++LSL K ++ G W +A ATFYGG+DASGTMGGACGYGNLYSQGYG NTAALSTALFN G SCGACF++KC DP+WC G I +T TNFCPPNFAQ ++ GGWCNPP+ HFDLA P+FL++AQY+AG+VPV YRRV CR++GGIRFTING YFNLVL+TNVAGAGD++ VS+KG NT+W SMSRN Sbjct: 9 ISLSLMMMIMWKSVDGYSSG-WVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGT--ITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRN 202
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 2.073e-78 Identity = 137/197 (69.54%), Postives = 155/197 (78.68%), Query Frame = 3 Query: 105 VALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 V LF A G G WQSAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G +CG+C+EL+C C PG+ I +TATNFCPPN+ PSD+GGWCNPPRPHFD+A P FL +AQYRAGIVPVS+RRVPC K+GG+RFT+NG YFNLVLVTNVAGAGD+ VS+KG+ T W MSRN Sbjct: 6 VLFLLFLARQASAAGY---GGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGS--ITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRN 197
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 2.073e-78 Identity = 137/197 (69.54%), Postives = 155/197 (78.68%), Query Frame = 3 Query: 105 VALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 V LF A G G WQSAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G +CG+C+EL+C C PG+ I +TATNFCPPN+ PSD+GGWCNPPRPHFD+A P FL +AQYRAGIVPVS+RRVPC K+GG+RFT+NG YFNLVLVTNVAGAGD+ VS+KG+ T W MSRN Sbjct: 6 VLFLLFLARQASAAGY---GGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGS--ITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRN 197
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.138e-76 Identity = 131/179 (73.18%), Postives = 147/179 (82.12%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQ-WLSMSRN 695 G WQ HATFYGG DASGTMGGACGYGNLY QGYG NTAALSTALFNNGL+CGAC+E+KC DP+WC I +TATNFCPPN +DNGGWCNPP HFDLA P FL++AQYRAGIVPVS+RRVPC K+GGIRFTING YFNLVL++NV GAGD+ VS+KG+ TQ W +MSRN Sbjct: 28 GGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCL--GSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRN 204
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 285.804 bits (730), Expect = 1.486e-76 Identity = 132/179 (73.74%), Postives = 152/179 (84.92%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANT-QWLSMSRN 695 G W+ HATFYGG+DASGTMGGACGYGNL+SQGYG+ TAALSTALFN+G CGACFEL+C DP+WC PG+ I+++ATNFCPPNFA +DNGGWCNPP HFDLA P FL++AQYRAGIVPV++RRVPC K GGIRFTING YF+LVL+TNV GAGDI VS+KG+ T QW SMSRN Sbjct: 30 GGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGS--IIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRN 206
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 4.046e-74 Identity = 130/183 (71.04%), Postives = 151/183 (82.51%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC---GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG-ANTQWLSMSRN 695 GG W SAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFNNGLSCGACFE++C GG C PG+ +++TATNFCPPN A PSD+GGWCNPPR HFD++ P+F ++A ++AGIVPVSYRRV C+K+GGIRFTING YFNLVLVTNV GAGD+ V+VK + W ++SRN Sbjct: 61 GGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGS--VVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRN 241
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 4.474e-73 Identity = 125/185 (67.57%), Postives = 148/185 (80.00%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQW-CNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANT------QWLSMSRN 695 G WQ HATFYGG DASGTMGGACGYGNLYSQGYG +TAALSTALFN GLSCG+C+EL+C GD + C PG + +TATNFCPPN+A PSD GGWCNPPR HFDLA P FL++A++ AGIVPVS+RRV C ++GG+RFT+NG YFNLVLVTNV GAGD+ ++VKG+ + +W MSRN Sbjct: 26 GQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRN 210
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 267.314 bits (682), Expect = 5.469e-71 Identity = 135/210 (64.29%), Postives = 151/210 (71.90%), Query Frame = 3 Query: 72 MALFRMLCFFSVALSLFATANAKIPGVFAGGP--WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 M L R+L +VA A V AGG W S ATFYGGSDASGTMGGACGYGNLYS GYG +TAALSTALFNNG SCGACFE++CGG C G A+ TATN CPPN+A D GGWCNPPRPHFD+A P F ++AQ RAG+VPV YRRV C K+GGIRFTI G YFNLVLVTNV GAGD+ VSVKG+ + W +MS N Sbjct: 1 MELLRLLAVAAVA--------AMAAEVAAGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAV--TATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHN 199
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 7.142e-71 Identity = 126/189 (66.67%), Postives = 150/189 (79.37%), Query Frame = 3 Query: 138 KIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGA-NTQWLSMSRN 695 KI V AG W AHATFYGGSDASGTMGGACGYGNLY+ GY NTAALSTALFN+G SCG C+++ C PQWC G +I ITATNFCPPNFAQ SDNGGWCNPPRPHFD+A P FL +A+Y+AGIVP+ Y++V CR+ GG+RFTING YF LVL++NVAG G+I +V +KG+ + +W +MSRN Sbjct: 20 KISSVSAG--WLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGK-SITITATNFCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRN 205
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 265.388 bits (677), Expect = 2.078e-70 Identity = 129/201 (64.18%), Postives = 148/201 (73.63%), Query Frame = 3 Query: 102 SVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANT-QWLSMSRN 695 S A + AT P V A WQ AHATFYGG+DASGTMGGACGYGNLYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + ITATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ Y AGI+PV Y+RVPC K+GG+RFTING YF LVLVTNVA AG I + V G+NT W+ M+RN Sbjct: 18 STAAANTATTTPTNP-VAAPTQWQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARN 216 The following BLAST results are available for this feature:
BLAST of FC920488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920488 ID=FC920488; Name=FC920488; organism=Citrus clementina; type=EST; length=695bpback to top |