FC920488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 261.922 bits (668), Expect = 2.298e-69 Identity = 123/210 (58.57%), Postives = 153/210 (72.86%), Query Frame = 3 Query: 78 LFRMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG--DPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGA--NTQWLSMSRN 695 +F ++ F S AL A+ + FA W ATFYGGSDASGTMGGACGYGNLY+QGYG TAALSTALF++G SCG C+ L C DP+WC G ++ +TATNFCPPN+A PSD+GGWCNPPRPHFD+A P + ++ YR GIVPV++RRVPCR+RGG+RFT+ G YF LVLVTNVA AG + + V+G+ W++MSRN Sbjct: 7 VFAVVAFVSYALLAAASTTVE---AFAASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAG-ASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRN 212
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 261.536 bits (667), Expect = 3.001e-69 Identity = 127/208 (61.06%), Postives = 150/208 (72.12%), Query Frame = 3 Query: 90 LCFFSVAL---SLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGAN-TQWLSMSRN 695 L FF++A + TA+ P V WQ AHATFYGG+DASGTMGG CGYG+LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + ITATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ Y AGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G I + + G+N T W+ M RN Sbjct: 10 LVFFAIAAVGCTQLTTADDAAPPV-----WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRN 211
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 3.919e-69 Identity = 122/178 (68.54%), Postives = 142/178 (79.78%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 GPW +AHATFYGG DASGTMGGACGYGNLYSQGYG+ TAALSTALF+ GLSCGACFEL C DPQWC G +I++TATNFCPP GG C+PP HFDL+ P++ K+A Y++GI+PV YRRV C++ GGIRFTING YFNLVLVTNV GAGD+ VS+KG+ T+W MSRN Sbjct: 36 GPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGR-SIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRN 204
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 259.996 bits (663), Expect = 8.731e-69 Identity = 122/179 (68.16%), Postives = 139/179 (77.65%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGAN-TQWLSMSRN 695 W AHATFYGG+DASGTMGGACGYG+LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + ITATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ YRAGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G I + V G+N T WL M RN Sbjct: 52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPG-VTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRN 229
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 1.945e-68 Identity = 124/209 (59.33%), Postives = 148/209 (70.81%), Query Frame = 3 Query: 72 MALFRMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG-DPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 MA RML + +L TA+A W A ATFYGGSDASGTMGGACGYG+LY GYG TAALSTALFN G SCGACF + C QWC PG +I +TATNFCPPN+A D GGWCNPPR HFD++ P + +A YRAGIVPV+YRRVPC++ GGIRF +NG YF LVLVTNV G+G + ++ +KG+ T W++MSRN Sbjct: 1 MAAARMLVLLASLCALLLTASA--------AKWTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGT-SITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRN 200
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 256.914 bits (655), Expect = 7.391e-68 Identity = 118/179 (65.92%), Postives = 138/179 (77.09%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGAN-TQWLSMSRN 695 W AHATFYGG+DASGTMGGACGY +LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + +TATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ YRAGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G I + + G+N T W+ M RN Sbjct: 50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRN 227
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 256.914 bits (655), Expect = 7.391e-68 Identity = 123/207 (59.42%), Postives = 148/207 (71.50%), Query Frame = 3 Query: 84 RMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG--DPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANT-QWLSMSRN 695 RML A+ A A G W AHATFYGG+DASGTMGGACGYGNLY+QGYG TAALSTALFN+GL+CG C++L C D WC PG ++ ITATNFCPPN+ PSD+GGWCNPPRPHFD+A P + K+ YR GI+PV Y+RVPC K+GG+RFTING YF LVL+TNV AG I + VKG+ + W++M+ N Sbjct: 6 RMLAAVVCAIMPAAAMAAGGVGALEPSGWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPG-VSVTITATNFCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHN 211
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 4.791e-67 Identity = 123/212 (58.02%), Postives = 155/212 (73.11%), Query Frame = 3 Query: 87 MLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGG----DPQWCNP--GNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK---GANTQWLSMSRN 695 +L S++ SL +++ A A G W AHATFYGG+DASGTMGGACGYGN Y QGYG +TAALS +F +GLSCGACFEL+CGG D + C P +I++TAT+ CP N A P D GGWCNPP HFDL+ P FL++A++++GIVPVSYRRV CR++GG+RFTING YFNLVLV+NV GAGD+ V+VK G +W +M+RN Sbjct: 9 LLVLLSLSSSLSSSSAA------AAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARN 214
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 251.521 bits (641), Expect = 3.105e-66 Identity = 117/210 (55.71%), Postives = 149/210 (70.95%), Query Frame = 3 Query: 72 MALFRMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 M + R + AL + + + A A G W S ATFYGG DASGTMGGACGYGNLY+QGYGV AALSTALFN G SCG C+ + C P+WC G A+ ITATN CPPN+A +D+GGWCNPPRPHFD++ P + + YRAGIVPV Y++V C ++GG+RFT++GF YF LVL+TNVAG+G + +SVKG+ T W+ ++RN Sbjct: 1 MMVIRFFAVLAAALCITSASAA------AAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGT-AVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARN 203
BLAST of FC920488 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 250.751 bits (639), Expect = 5.297e-66 Identity = 116/183 (63.39%), Postives = 137/183 (74.86%), Query Frame = 3 Query: 153 FAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRN 695 F W A ATFYGGSDASGTMGGACGYG+LYS GYG NTAALST LFN+G SCG C+ + C D ++C G ++ ITATN CPPN+A P+D GGWCNPPR HFD+A P +LK+ Y GIVPV Y+RVPC K+GG+RFTING YF LVLV+NV G G I VS+KG+ T W++MSRN Sbjct: 29 FTASGWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGT-SVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRN 210 The following BLAST results are available for this feature:
BLAST of FC920488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920488 ID=FC920488; Name=FC920488; organism=Citrus clementina; type=EST; length=695bpback to top |