FC920490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 52/200 (26.00%), Postives = 102/200 (51.00%), Query Frame = 1 Query: 178 DLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNN--------------------------GIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +L +R K L ++ + + + E + ++ +E++K + +P ++ +E++D N +V +++ ++ ++ ++ + LKP+ V +++ S ++D LP E DS + + EKP TY+D+GG D Q +E+ EA+ LP+ + +K +GI P+G L+YGPPGTGK Sbjct: 29 ELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEKIKNNRQLPYLVANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQTVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGK 228
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 42/83 (50.60%), Postives = 61/83 (73.49%), Query Frame = 1 Query: 451 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 V + R+ + LPP+ D+S++++ EKPD+TY D+GGC Q +++RE VE+PL H E + +GIDPP+GVL+YGPPGTGK Sbjct: 135 VGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGK 217
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20 Identity = 45/119 (37.82%), Postives = 73/119 (61.34%), Query Frame = 1 Query: 343 EMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 + ++N ++ + + V + ++ ++ V R+ A+ LPP+ D S++++ EKPDVTY D+GGC Q + +RE VELPL E + ++GIDPP+G++LYGPPGTGK Sbjct: 108 QSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGK 226
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19 Identity = 53/146 (36.30%), Postives = 83/146 (56.85%), Query Frame = 1 Query: 262 NLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 N K +LR EE++ +Q +G+ ++ +D+ +V + V + ++ + + VAL S L +LP + D +SL+ + PD TY +GG D Q +EI+E +ELP+ H EL+ +GI P+GVLLYGPPGTGK Sbjct: 49 NAKVRMLR--EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 192
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19 Identity = 41/70 (58.57%), Postives = 55/70 (78.57%), Query Frame = 1 Query: 490 LPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 LPP D S+++++ EKPDVTY+D+GGC Q +++RE VELPL E + +GIDPP+G+LLYGPPGTGK Sbjct: 187 LPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGK 256
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19 Identity = 41/70 (58.57%), Postives = 56/70 (80.00%), Query Frame = 1 Query: 490 LPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 LPP+ D S+++++ EKPD TY+DIGGC Q ++IRE VELP+ H E + ++GIDPP+GVL YGPPG+GK Sbjct: 183 LPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGK 252
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 63/207 (30.43%), Postives = 105/207 (50.72%), Query Frame = 1 Query: 82 MAASAMVLDPKPVSEPPPSTRSDLTEQWSDED-DLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 M+ S + D + P ST ++ D D+ + LQ QL+ ++ + E L+ E+ R Q E + +++ L + ++ + + ++ + + LS + L+ VA++ S ++ VL E D+ + E P VTY DIGG D Q +E+REAVE PL + E + +G++PP GVLL+GPPGTGK Sbjct: 1 MSRSPSLPDRPTLDVDPESTPAERLNALQDHYVDIVAVNGELQAQLDDVEARRE-------ELREEVNRLQRENETLKTASLYLATVEDLPEDGSAVIKQHGNNQEVLTELSPRLADTLEVGDRVAIN-DSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGK 199
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 451 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 V + R+ + LPP+ D +++++ EKPDVTY+D+GGC Q +++RE VE PL H E + +GI+PP+GVLL+GPPGTGK Sbjct: 140 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 451 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 V + R+ + LPP+ D +++++ EKPDVTY+D+GGC Q +++RE VE PL H E + +GI+PP+GVLL+GPPGTGK Sbjct: 140 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 451 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 V + R+ + LPP+ D +++++ EKPDVTY+D+GGC Q +++RE VE PL H E + +GI+PP+GVLL+GPPGTGK Sbjct: 140 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222 The following BLAST results are available for this feature:
BLAST of FC920490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920490 ID=FC920490; Name=FC920490; organism=Citrus clementina; type=EST; length=702bpback to top |