FC920490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 451 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 V + R+ + LPP+ D +++++ EKPDVTY+D+GGC Q +++RE VE PL H E + +GI+PP+GVLL+GPPGTGK Sbjct: 140 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 451 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 V + R+ + LPP+ D +++++ EKPDVTY+D+GGC Q +++RE VE PL H E + +GI+PP+GVLL+GPPGTGK Sbjct: 140 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 451 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 V + R+ + LPP+ D +++++ EKPDVTY+D+GGC Q +++RE VE PL H E + +GI+PP+GVLL+GPPGTGK Sbjct: 140 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 43/104 (41.35%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 388 SNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 + + V + ++ ++ V + R+ + LP + D +++++ EKPDVTY+D+GGC Q +++RE VE PL H E Y +GI+PP+GVLLYGPPGTGK Sbjct: 121 AKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGK 224
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 451 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 V + R+ + LPP+ D +++++ EKPDVTY+D+GGC Q +++RE VE PL H E + +GI+PP+GVLL+GPPGTGK Sbjct: 140 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGK 222
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15 Identity = 33/65 (50.77%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 505 DSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 + +S + +++ PDVTY DIGG + +++RE +ELP+ H EL++++GI+PP+GVLL GPPGTGK Sbjct: 162 EEPVSEIKETKVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGK 226 HSP 2 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 33/55 (60.00%), Postives = 44/55 (80.00%), Query Frame = 1 Query: 535 EKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 E P+V + DIGG + KQE+REAVE PL E++++IG+ PP+GVLL+GPPGTGK Sbjct: 445 EVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGK 499
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: CDC48_SCHPO (Cell division cycle protein 48 OS=Schizosaccharomyces pombe GN=cdc48 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.444e-15 Identity = 36/57 (63.16%), Postives = 44/57 (77.19%), Query Frame = 1 Query: 529 QSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +S +V Y+DIGGC Q +IRE VELPL H +L+K IGI PPRG+L+YGPPGTGK Sbjct: 215 ESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGK 271
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14 Identity = 34/53 (64.15%), Postives = 44/53 (83.02%), Query Frame = 1 Query: 541 PDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 PDVTY DIGG + + +RE +ELPL H EL++++GI+PP+GVLLYGPPGTGK Sbjct: 177 PDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGK 229 HSP 2 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 1 Query: 535 EKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 E P+V + DIGG + KQE+ EAVE PL + E+++ I PPRG+LL+GPPGTGK Sbjct: 448 EVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGK 502
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14 Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+DIGGC Q +IRE VELPL H +L+K IGI PPRGVL+YGPPGTGK Sbjct: 210 EVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGK 261 HSP 2 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 535 EKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 E +VT++D+GG D K+E++E VE P+ H + Y + G+ P +GVL YGPPGTGK Sbjct: 480 ESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGK 534
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: CDC48_EMENI (Cell division control protein 48 OS=Emericella nidulans GN=cdc48 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14 Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+DIGGC Q +IRE VELPL H +L+K IGI PPRG+L+YGPPGTGK Sbjct: 225 EVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGK 276 The following BLAST results are available for this feature:
BLAST of FC920490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920490 ID=FC920490; Name=FC920490; organism=Citrus clementina; type=EST; length=702bpback to top |