FC920490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: MPA_MYCLE (Proteasome-associated ATPase OS=Mycobacterium leprae GN=mpa PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 43/90 (47.78%), Postives = 53/90 (58.89%), Query Frame = 1 Query: 430 LLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 L+ P A A R A V+ L E E PDV+Y DIGG Q ++IR+AVELP H ELY++ + PP+GVLLYGPPG GK Sbjct: 221 LVDPKAGYAFERVPKAEVEDLVLE-----------EVPDVSYQDIGGLTRQIEQIRDAVELPFLHKELYREYALRPPKGVLLYGPPGCGK 299
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: CDC48_ENCCU (Cell division control protein 48 OS=Encephalitozoon cuniculi GN=CDC48 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 1 Query: 547 VTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 V Y+D+GGC Q +IRE VELPL H +LY +IG+ PP+G+LLYGPPGTGK Sbjct: 205 VGYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGK 255
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 415 TINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQS--EKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 TI E++K V+++ NAL + P SLL + E P V +NDIGG D KQ++REAVE PL EL+ + G+ PP+G+LL+GPPGTGK Sbjct: 446 TIPAEIIK-ELKVSMNDFLNALKSIQP-------SLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGK 534 HSP 2 Score: 75.485 bits (184), Expect = 3.127e-13 Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = 1 Query: 541 PDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 P V++ DIG + KQ+IRE VE P+ H EL++++GIDPP+G+LLYGPPGTGK Sbjct: 207 PKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGK 259
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: MPA_MYCTU (Proteasome-associated ATPase OS=Mycobacterium tuberculosis GN=mpa PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14 Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 433 LKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 L+P S+ + + + +P + + L E PDV+Y DIGG Q ++IR+AVELP H ELY++ + PP+GVLLYGPPG GK Sbjct: 214 LRPGDSLLVDTKAGYAFERIPK---AEVEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVLLYGPPGCGK 299
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: MPA_MYCBO (Proteasome-associated ATPase OS=Mycobacterium bovis GN=mpa PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14 Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 433 LKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 L+P S+ + + + +P + + L E PDV+Y DIGG Q ++IR+AVELP H ELY++ + PP+GVLLYGPPG GK Sbjct: 214 LRPGDSLLVDTKAGYAFERIPK---AEVEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVLLYGPPGCGK 299
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: TERA_XENTR (Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis GN=vcp PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+DIGGC Q +I+E VELPL H L+K IG+ PPRG+LLYGPPGTGK Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGK 251
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: TERA_XENLA (Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+DIGGC Q +I+E VELPL H L+K IG+ PPRG+LLYGPPGTGK Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGK 251
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+DIGGC Q +I+E VELPL H L+K IG+ PPRG+LLYGPPGTGK Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGK 251
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+DIGGC Q +I+E VELPL H L+K IG+ PPRG+LLYGPPGTGK Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGK 251
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+DIGGC Q +I+E VELPL H L+K IG+ PPRG+LLYGPPGTGK Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGK 251 The following BLAST results are available for this feature:
BLAST of FC920490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920490 ID=FC920490; Name=FC920490; organism=Citrus clementina; type=EST; length=702bpback to top |