FC920490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+DIGGC Q +I+E VELPL H L+K IG+ PPRG+LLYGPPGTGK Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGK 251
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: TERA_BOVIN (Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+DIGGC Q +I+E VELPL H L+K IG+ PPRG+LLYGPPGTGK Sbjct: 200 EVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGK 251
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.395e-13 Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 1 Query: 547 VTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 V Y+DIGGC Q +I+E VELPL H L+K IG+ PPRG+L+YGPPGTGK Sbjct: 198 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGK 248
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13 Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 DV Y+D+GG Q +IRE VELPL H +L+K IG+ PP+G+LLYGPPG+GK Sbjct: 203 DVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 254
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: TERA1_CAEEL (Transitional endoplasmic reticulum ATPase homolog 1 OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 D+ Y+D+GG Q +I+E VELPL H +L+K IGI PPRG+LL+GPPGTGK Sbjct: 206 DIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGK 257
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: MPA_RHOER (Proteasome-associated ATPase OS=Rhodococcus erythropolis GN=mpa PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 433 LKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 L+P S+ + + + +P + + L E PDV Y+DIGG Q ++IR+AVELP H +L+ + + PP+GVLLYGPPG GK Sbjct: 196 LRPGDSLLVDTKAGYAFERIPK---AEVEDLVLEEVPDVHYDDIGGLGRQIEQIRDAVELPFLHKDLFHEYSLRPPKGVLLYGPPGCGK 281
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 31/51 (60.78%), Postives = 41/51 (80.39%), Query Frame = 1 Query: 547 VTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 ++Y DIGG Q +IRE +ELPL H EL++++GI PP+GV+LYGPPGTGK Sbjct: 187 ISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGK 237 HSP 2 Score: 69.707 bits (169), Expect = 1.716e-11 Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 343 EMVDQNNGIVGSTTGSNYYVRILSTINR-----ELLKPSASVALHR-------HSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 EM D G VG+ + ++ + R +L KP + L + NAL + P SS+ + E P+V ++DIGG + K+EI+E VELPL +++K++GI P +G LLYGPPG GK Sbjct: 389 EMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTEILEKMVVTEDDFKNALKSIEP----SSLREV-MVEVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGK 514
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: TERA_DANRE (Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+DIGG Q +I+E VELPL H L+K IG+ PPRG+LLYGPPGTGK Sbjct: 200 EVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGK 251
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 29/51 (56.86%), Postives = 43/51 (84.31%), Query Frame = 1 Query: 547 VTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +TY DIGG + + Q +RE VELP+ H ++++++GI+PP+GVLL+GPPGTGK Sbjct: 186 ITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGK 236 HSP 2 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 535 EKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 E P +T++D+GG K ++E+VE PL E + ++G++PP GVLLYGPPGTGK Sbjct: 455 ELPKITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGK 509
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: CDC48_SOYBN (Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 544 DVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +V Y+D+GG Q +IRE VELPL H +L+K IG+ PP+G+LLYGPPG+GK Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255 The following BLAST results are available for this feature:
BLAST of FC920490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920490 ID=FC920490; Name=FC920490; organism=Citrus clementina; type=EST; length=702bpback to top |