FC920490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.443e-34 Identity = 83/213 (38.97%), Postives = 130/213 (61.03%), Query Frame = 1 Query: 112 KPVSEPPPSTRSDLTEQWSDEDDLYS--------------RLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSV---PLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 KP EPP TR+ ++ + S RL +QR + + ++EEYV+++++ LK + R QEE R+ + P+ +G E++D ++ IV ST G YYV I+S +++++L+P SV LH + ++V +L + D I+++ + P +Y DIGG + Q QEI+EAVELPLTH ELY+++GI PP+GV+LYG PGTGK Sbjct: 28 KPKYEPPVPTRTGRRKKKAQSGPDASAKLPTVIPTTRCRLRLLKMQRIHDHLLMEEEYVQNQER-LKPQDERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAIV-STAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGK 238
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.884e-34 Identity = 70/173 (40.46%), Postives = 119/173 (68.79%), Query Frame = 1 Query: 190 RLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEE---VKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +L L+R +++ +++E+++++++ LK + + +EE V ++ P+ +G E++D N+ IV ++ GS +YV ILS ++++ L+P SV L+ +A+V VL + D ++++ + P TY DIGG D Q QEI+E+VELPLTH E Y+++GI PP+GV+LYGPPGTGK Sbjct: 60 KLLKLERIKDYLMMEDEFIRNQER-LKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 231
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.083e-33 Identity = 71/175 (40.57%), Postives = 118/175 (67.43%), Query Frame = 1 Query: 190 RLKSL--QRQLEFIDIQEEYVKDEQKNLKRELLRAQEE---VKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 RLK L +R +++ +++E+++++++ LK + R +EE V ++ P+ +G E++D + IV + GS +YV I+S +++E L+P SV L+ ++A++ VL + D +S++ + P TY D+GG D Q QEI+EAVELPLTH E Y+++GI PP+GV+LYG PGTGK Sbjct: 62 RLKLLKSERIKDYLLMEQEFIQNQER-LKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGK 235
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.641e-33 Identity = 70/172 (40.70%), Postives = 112/172 (65.12%), Query Frame = 1 Query: 190 RLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQE--EVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 RL L+R +++ ++EE+V +++ E ++ +V ++ P+ +G E++D+++ IV S+ G YYV ILS ++++ L+P S+ +H ++V +L E D +S++ + P +Y DIGG D Q QEI+EAVELPLTH ELY+ IGI PP+GV+LYG PGTGK Sbjct: 69 RLLKLERVKDYLLMEEEFVAAQERLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGK 240
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.916e-33 Identity = 69/168 (41.07%), Postives = 113/168 (67.26%), Query Frame = 1 Query: 196 KSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 ++L ++ ++ + +++E+ L RE+ + E++R ++ PLVI E++D + V STTG ++ + I+R+ L+P A VAL++ + ++VDVLP E D ++ + EKPDV+Y IGG + Q +E++E VELPL EL+++IGI+PP+GVLLYGPPGTGK Sbjct: 31 RNLMWKIRKLEKDKLLIENERTRLDREVKSLRGEIERFRTPPLVIATVTEVLDDHRVAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGK 198
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.034e-32 Identity = 74/192 (38.54%), Postives = 118/192 (61.46%), Query Frame = 1 Query: 127 PPPSTRSDLTEQWSDE-DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 P P DL + +L R L+ QL I+ + Y++ ++ +RE+ + + E+++++S PLVIG +++D+N IV S+ G + V I ++N E +KP A L++ S A+V++LP D+ I + E P Y +IGG + Q EIREAVELPL E+++++GI+PP+GVLL+GPPGTGK Sbjct: 9 PEPQKGEDLYRYLLERVTNLEDRNTELREQLRQIEADKRYLETQKVRYEREVRKFKGEIEQMKSPPLVIGTVTDLIDENRVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGK 200
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.034e-32 Identity = 73/187 (39.04%), Postives = 114/187 (60.96%), Query Frame = 1 Query: 142 RSDLTEQWSDE-DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 + DL Q + L SR L+ Q+ + + Y++ ++ +RE+ + + E ++++S PL+IG +++VD N IV S+ G + VR ++N + +KP A L++ S A+V++LP D+ + + + P Y DIGG Q E+REAVELPL EL+ QIGI+PP+GVLLYGPPGTGK Sbjct: 39 KQDLESQMLERISSLESRNLELREQIRQAEADKRYIETQKIRYEREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGK 225
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.131e-32 Identity = 64/171 (37.43%), Postives = 109/171 (63.74%), Query Frame = 1 Query: 187 SRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 S+ + L+ Q+ ++ + Y++ ++ +RE+ + + E++ +++ PL++G +++D +V S+ G + VR+ +N LK L++ S A+V+VLP DS + + + P TY DIGG + Q EIREAVELP+T +L+++IGI+PP+GVLLYGPPGTGK Sbjct: 30 SQNQELKEQIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGK 200
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.493e-31 Identity = 65/166 (39.16%), Postives = 114/166 (68.67%), Query Frame = 1 Query: 211 QLEFIDIQEEYVKDEQ---KNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +++ + + EE +K Q +NL++EL + E++++ S PL+ ++++ +V S++G N V + S I+++L+KP SVAL++ + +++VLP + D + + EKP+VTY++IGG + Q +E+RE VELPL E++++IG++PP+GVLLYGPPGTGK Sbjct: 16 EVQLVRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGK 181
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.493e-31 Identity = 65/166 (39.16%), Postives = 114/166 (68.67%), Query Frame = 1 Query: 211 QLEFIDIQEEYVKDEQ---KNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +++ + + EE +K Q +NL++EL + E++++ S PL+ ++++ +V S++G N V + S I+++L+KP SVAL++ + +++VLP + D + + EKP+VTY++IGG + Q +E+RE VELPL E++++IG++PP+GVLLYGPPGTGK Sbjct: 16 EVQLVRLLEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGK 181 The following BLAST results are available for this feature:
BLAST of FC920490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920490 ID=FC920490; Name=FC920490; organism=Citrus clementina; type=EST; length=702bpback to top |