FC920490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21 Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 205 QRQLEFIDIQEEYVKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 Q L I+ + V D+ +NL+R L+AQ EE++ +Q +G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGK Sbjct: 22 QYYLSKIEELQLIVNDKSQNLRR--LQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGK 196
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS6A_SCHPO (26S protease regulatory subunit 6A OS=Schizosaccharomyces pombe GN=tbp1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.389e-21 Identity = 49/196 (25.00%), Postives = 103/196 (52.55%), Query Frame = 1 Query: 175 DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQN---------------------NGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 D+L SR + L+ ++ + + + + E+ + ++ QE++ + +P ++G +E++D + ++ ++T ++ ++ + E L P + +++ S ++D LP E DS + + EKP Y+DIGG Q +E+ EA+ LP+ + ++++G+ PP+G L++GPPGTGK Sbjct: 37 DELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILDMQPDEVDVQESANQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGK 232
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 48/131 (36.64%), Postives = 82/131 (62.60%), Query Frame = 1 Query: 319 PLVIGQFMEMVDQNNG----IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 PL + + ++++ N+ ++ + + V + ++ ++ V + R+ + LPP+ D S+++++ EKPDVTYND+GGC Q +++RE VELP+ H E + ++GIDPP+GVL YGPPGTGK Sbjct: 84 PLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 214
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.075e-21 Identity = 48/131 (36.64%), Postives = 81/131 (61.83%), Query Frame = 1 Query: 319 PLVIGQFMEMVDQNNG----IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 PL + + ++++ N ++ + + V + ++ ++ V + R+ + LPP+ D S+++++ EKPDVTYND+GGC Q +++RE VELP+ H E + ++GIDPP+GVL YGPPGTGK Sbjct: 85 PLQVARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.075e-21 Identity = 48/131 (36.64%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 319 PLVIGQFMEMVDQNNG----IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 PL + + +++ N ++ + + V + ++ ++ V + R+ + LPP+ D S+++++ EKPDVTYND+GGC Q +++RE VELP+ H E + ++GIDPP+GVL YGPPGTGK Sbjct: 85 PLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 65/203 (32.02%), Postives = 104/203 (51.23%), Query Frame = 1 Query: 91 SAMVLDPKPVSEPPPSTRSDLTEQWSDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 +A V V E S EQ E +L +++S + ++ Q + D+ + +K +E++ +Q +G+ +++V +V Y V + IN + LK S V L S L VL +AD +SL+ + PD TY+ +GG Q +EI+E +ELP+ H EL++ +GI P+GV+LYGPPGTGK Sbjct: 2 TAAVTSSNIVLETHESGIKPYFEQKIQETEL--KIRSKTENVRRLEAQRNALNDKVRFIK-------DELRLLQEPGSYVGEVIKIVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGK 195
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 52/149 (34.90%), Postives = 86/149 (57.72%), Query Frame = 1 Query: 253 EQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 ++ L + +EE++ + + + + ++++ +N +V + V I T++ L PS AL S L +LP + D +SL+ + PD TY+ +GG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGK Sbjct: 44 QRNELNNRVRMLKEELQLLTNPGSHVAEVVKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 192
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 44/83 (53.01%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 451 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 V + R+ + LPP+ D S+++++ EKPDVTYND+GGC Q +++RE VELP+ H E + ++GIDPP+GVL YGPPGTGK Sbjct: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 62/177 (35.03%), Postives = 95/177 (53.67%), Query Frame = 1 Query: 205 QRQLEFIDIQEEYVKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 Q L I+ + V D+ +NL+R L+AQ EE++ +Q +G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H E ++ +GI P+GVLLYGPPGTGK Sbjct: 17 QYYLSKIEDLQLVVNDKSQNLRR--LQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGK 191
BLAST of FC920490 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 55/146 (37.67%), Postives = 84/146 (57.53%), Query Frame = 1 Query: 262 NLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGK 699 N K +LR EE++ +Q +G+ ++ +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY +GG D Q +EI+E +ELP+ H EL+ +GI P+GVLLYGPPGTGK Sbjct: 52 NAKVRMLR--EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 195 The following BLAST results are available for this feature:
BLAST of FC920490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920490 ID=FC920490; Name=FC920490; organism=Citrus clementina; type=EST; length=702bpback to top |