FC920494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.513e-31 Identity = 67/115 (58.26%), Postives = 81/115 (70.43%), Query Frame = 1 Query: 97 ALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 +LKL +VLCM+V PL+ A+T GQVT SLAPCI YLR G VP CC G++SLN+AA+TTP RQ AC C+K AA I +N A GLP CGV+IPYKIS STDC+ V+ Sbjct: 2 SLKLACVVVLCMVVGAPLAQGAVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.452e-30 Identity = 63/113 (55.75%), Postives = 80/113 (70.80%), Query Frame = 1 Query: 94 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 A +KL A++LC++V P + ITCG V+ LAPCI YL+ GGP+ CC G+++LNAAA TTPDR+TACNCLK AA +I +N A GLP CGV IPY IS ST+C+ V Sbjct: 5 AVIKLACAVLLCIVVAAPYAEAGITCGMVSSKLAPCIGYLK-GGPLGGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNCNAV 116
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP3_LENCU (Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.896e-30 Identity = 62/107 (57.94%), Postives = 76/107 (71.03%), Query Frame = 1 Query: 115 ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 ALV+CM+V P++ A++CG VTG LAPCI YL G CC GV+ L AAA TT DRQ ACNCLK AAG+I NLNP NA LP C V+IPYKIS +T+C+ ++ Sbjct: 11 ALVMCMVVIAPMAEAAVSCGTVTGDLAPCIPYLTGGAGPTDSCCAGVKKLLAAAPTTADRQAACNCLKTAAGNINNLNPGNAAALPGKCNVNIPYKISTTTNCNTIK 117
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.518e-30 Identity = 59/114 (51.75%), Postives = 83/114 (72.81%), Query Frame = 1 Query: 100 LKLVSALVLCMLVTGPLSA-QAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 +KL ++ CM+V GP++A +A+TCG V ++APCI Y+ GG +P CC GV LN+ ARTTPDRQ AC CL+ AA ++ PNLN A G+P+ACGVS+P+ IS +T+C+ V+ Sbjct: 5 MKLACLVLACMIVAGPITANRALTCGTVNSNVAPCIGYITQGGTLPGACCTGVSKLNSMARTTPDRQQACRCLETAARALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.738e-29 Identity = 60/114 (52.63%), Postives = 81/114 (71.05%), Query Frame = 1 Query: 100 LKLVSALVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGP-IPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 +KL + CM+V GP+++ A ++CG V+G +APCI YL P +P CC+GV SLN ARTTPDRQ AC CL AA ++P +N A GLP+ACGV+IPYKIS +T+C+ V+ Sbjct: 5 MKLACLIFACMIVAGPITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.738e-29 Identity = 60/114 (52.63%), Postives = 83/114 (72.81%), Query Frame = 1 Query: 100 LKLVSALVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 +KL L+ CM+V GP+++ A ++CG V +LA CI Y+ GG IP CC+GV++LN+ A+TTPDRQ ACNC++ AA ++ LN A G+P+ACGV+IPYKIS ST+C VR Sbjct: 5 MKLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNSIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP_DAUCA (Non-specific lipid-transfer protein OS=Daucus carota GN=EP2 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.577e-29 Identity = 65/111 (58.56%), Postives = 81/111 (72.97%), Query Frame = 1 Query: 109 VSALVLCM-LVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 V+ +V+ M L T P + +TCGQVTG+LAPC+ YLRS +PVP CCN VR LN AARTT D++TAC CLKQ A ++ LN N A GLP CGV+IPYKIS +TDC++V Sbjct: 9 VAMMVMYMVLATTPNAEAVLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSJ (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. japonica GN=LTP PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.101e-29 Identity = 64/115 (55.65%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 91 MAALKLVS-ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 MA +LV ALV +L+ P +A AITCGQV ++ PC+ Y R G CC+GVRSL AAA TT DR+TACNCLK AA I LN NA +P CGVS+PY IS S DCS+V Sbjct: 1 MARAQLVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.101e-29 Identity = 64/115 (55.65%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 91 MAALKLVS-ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 MA +LV ALV +L+ P +A AITCGQV ++ PC+ Y R G CC+GVRSL AAA TT DR+TACNCLK AA I LN NA +P CGVS+PY IS S DCS+V Sbjct: 1 MARAQLVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIKGLNAGNAASIPSKCGVSVPYTISASIDCSRV 115
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP3_ARATH (Non-specific lipid-transfer protein 3 OS=Arabidopsis thaliana GN=LTP3 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.968e-29 Identity = 60/113 (53.10%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 97 ALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 AL+ + LVL + + + A AI+CG V GSLAPC YL GG +P CC GV++LN+ A+TTPDRQ AC C++ A SI LNP+ A GLP CGVSIPY IS+ST+C+ ++ Sbjct: 4 ALRFFTCLVLTVCIVASVDA-AISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNIK 115 The following BLAST results are available for this feature:
BLAST of FC920494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920494 ID=FC920494; Name=FC920494; organism=Citrus clementina; type=EST; length=654bpback to top |