FC920494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.359e-28 Identity = 61/118 (51.69%), Postives = 78/118 (66.10%), Query Frame = 1 Query: 88 QMAALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIP--NLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 Q+ L + A++ CM V GP + A++CGQV +L PCI Y+ +GG + CC GVRSL + A+TT DRQ+ CNCLKQA IP N N A GLP CGV+IPYKIS STDC ++ Sbjct: 6 QLLKLVCLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPSCCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.318e-28 Identity = 62/114 (54.39%), Postives = 76/114 (66.67%), Query Frame = 1 Query: 94 AALKLVSALVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 A L LV+ + +L+ GP + A I+CGQV +++PC+ Y R G CC+GVRSLN+AA TT DR+TACNCLK AGSI LN NA +P CGVSIPY IS S DCS V Sbjct: 4 AQLVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.318e-28 Identity = 66/119 (55.46%), Postives = 85/119 (71.43%), Query Frame = 1 Query: 91 MAALKLVSALV--LCMLV-TGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 MA+L+ VS LV +CM+V + P++ AI+CG V+G+L PC+ YL+ GGP P P CC GV+ LN AARTT DR+ ACNCLK +AGSI L P N LP CGV +PY IS ST+C+ +R Sbjct: 1 MASLR-VSCLVALMCMVVISAPMAEAAISCGTVSGALVPCLTYLK-GGPGPSPQCCGGVKRLNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTNCNTIR 117
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.318e-28 Identity = 65/116 (56.03%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 91 MAALKLVS-ALVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 MA +LV ALV +L+ GP + A I+CGQV +++PC+ Y R G CC+GVRSLN+AA TT DR+TACNCLK AGSI LN NA +P CGVSIPY IS S DCS V Sbjct: 1 MARAQLVLVALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.318e-28 Identity = 62/114 (54.39%), Postives = 76/114 (66.67%), Query Frame = 1 Query: 94 AALKLVSALVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 A L LV+ + +L+ GP + A I+CGQV +++PC+ Y R G CC+GVRSLN+AA TT DR+TACNCLK AGSI LN NA +P CGVSIPY IS S DCS V Sbjct: 4 AQLVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.954e-28 Identity = 59/111 (53.15%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 100 LKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 + ++ V CM+ + A AI+CGQVT L PC YL +GGP+P CCNGVR LN AA+TTPDRQTAC CLK + +N NNA LP CG+SI YKI+ + DCSK+ Sbjct: 6 MNVLCVAVACMVFSASY-ADAISCGQVTSGLVPCFGYLAAGGPVPPACCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.165e-28 Identity = 61/114 (53.51%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 100 LKLVSALVLCMLVTGPLSAQAI-TCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 +KL ++ CM+V GP++A A+ +CG V G+LA CI YL G P+ CCNGV +L A TTPDRQ AC CL+ AA ++ P LN A GLP AC V+IPYKIS ST+C+ VR Sbjct: 5 MKLACMVLACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQGCCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.745e-28 Identity = 61/110 (55.45%), Postives = 74/110 (67.27%), Query Frame = 1 Query: 106 LVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIP-VPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 + +A+V +L+ S AI+CGQV ++APCI Y R G P CC+GVRSLN AARTT DR+ ACNCLK AA + LN NA +P CGVSIPY IS STDCS+V Sbjct: 10 VATAVVALVLLAAATSEAAISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 119
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP2_TOBAC (Non-specific lipid-transfer protein 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.963e-27 Identity = 60/111 (54.05%), Postives = 78/111 (70.27%), Query Frame = 1 Query: 103 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 K+ +VLCM+V P A+A++CGQV LAPC+ YL+ GP+ CC GV+ L AA++ DR+TAC CLK AA +I ++ A GLP ACGV+IPYKIS STDCSKV+ Sbjct: 6 KIACFVVLCMVVVAP-HAEALSCGQVQSGLAPCLPYLQGRGPLG-SCCGGVKGLLGAAKSLSDRKTACTCLKSAANAIKGIDMGKAAGLPGACGVNIPYKISPSTDCSKVQ 114
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.963e-27 Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 103 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 K+ ++LCM+V P A+A+TCGQVT LAPC+ YL+ GP+ CC GV++L +A+TT DR+TAC CLK AA +I ++ N A G+P C V+IPYKIS STDCS V+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTAGLAPCLPYLQGRGPLG-GCCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114 The following BLAST results are available for this feature:
BLAST of FC920494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920494 ID=FC920494; Name=FC920494; organism=Citrus clementina; type=EST; length=654bpback to top |