FC920494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 5.344e-25 Identity = 57/113 (50.44%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 103 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP---CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 K V+A+++ L+ +A A+TCGQV LAPCI+Y + G + P CC+GVR+LN+AA TT DRQT C CLKQ ++ L P+ G+P CGV+IPY IS STDCS+V Sbjct: 8 KYVAAVMVVALLLAAPAASAVTCGQVVSMLAPCIMY--ATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.191e-24 Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 1 Query: 163 ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 ++CG V LAPCI YLRS GP+PV CCNGV++L +A TT DR+TAC CL A+ SI +N A GLP CGV+IPYKIS ST+C +V Sbjct: 1 LSCGDVATQLAPCINYLRSAGPLPVACCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.031e-24 Identity = 59/114 (51.75%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 100 LKLVSALVLCMLVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 LKL + +++CMLVT P++++A I+CG VTGSL C YL GG IP CC+GV+ LN+ ARTT DRQ AC C++ AA ++ LN A LP AC V I Y IS T+C+ VR Sbjct: 5 LKLSTLVIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGGFIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.909e-24 Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 94 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPV-PCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 A + L++A ++ ML P +A A+ CGQV + PC+ Y++ GGP P CCNGVR L+ A+++ DRQT CNCLK A I NLN NNA +P C V++PY IS DCS++ Sbjct: 4 AQVLLMAAALVLMLTAAPRAAVALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.717e-24 Identity = 59/119 (49.58%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 85 SQMAALKLVS-ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 ++ AA +LV A+V ML+ + AI+CGQV+ +L+PCI Y R +G PV CC+GV+ L AA++T D+Q AC C+K AAG LN A G+P CGVS+PY IS S DCSK+R Sbjct: 2 ARAAATQLVLVAMVAAMLIVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.316e-23 Identity = 59/119 (49.58%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 85 SQMAALKLVS-ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 ++ AA +LV A+V ML+ + AI+CGQV+ +L+PCI Y R +G PV CC+GV+ L AA++T D+Q AC C+K AAG LN A G+P CGVS+PY IS S DCSK+R Sbjct: 2 ARAAATQLVLVAMVAAMLLVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.719e-23 Identity = 56/115 (48.70%), Postives = 70/115 (60.87%), Query Frame = 1 Query: 97 ALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP--CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 +LKL +VLC+LV PL+ AI+ QV SL PC+ Y+R P P C G+RSL +AAR DRQ AC C+K A I ++N A GLP C V IPYKIS S DC +V+ Sbjct: 6 SLKLACVVVLCLLVDAPLAQGAISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.245e-23 Identity = 56/118 (47.46%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 85 SQMAALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 435 SQ+ + LV+A++L + AI+CGQV+ +L+PCI Y R +G P CC+GV+ L AA++T D+Q AC C+K AAG LN A G+P CGVS+PY IS S DCSK+R Sbjct: 7 SQLVLVALVAAMLLVA------ADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.830e-23 Identity = 49/110 (44.55%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 103 KLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 K+++ L++ + + I CG VT +LA C+ YL + GP+P CC GV+SL A+TTPDR+ C CLK A I LN + LP CGVSIPY IS ST+C + Sbjct: 6 KIITCLIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of FC920494 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.002e-23 Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 1 Query: 85 SQMAALKLVS-ALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 432 ++ AA +LV A+V ML+ + AI+CGQV+ +L+PCI Y R +G PV CC+GV+ L AA++T D+Q AC CLK A SI +N G+P CGVS+P+ IS+STDC+KV Sbjct: 2 ARAAATQLVLVAMVAAMLLVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117 The following BLAST results are available for this feature:
BLAST of FC920494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920494 ID=FC920494; Name=FC920494; organism=Citrus clementina; type=EST; length=654bpback to top |