FC920505

Overview
NameFC920505
Unique NameFC920505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5884 contig Ccv1_Contig5884:1..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP12_ARATH (Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.949e-27
Identity = 54/143 (37.76%), Postives = 90/143 (62.94%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNM------SLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            GY  +    D ++FY+F +S RN K+DP+++WL+GGPGCSS   + +ENGP ++   +      SLV   + W K +N++++DQP G GFSY+        ++ G   ++++FLQ +  +HP+ + N FY +G+SY+G  +PA
Sbjct:   42 GYIGIGEEEDVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSITGLLFENGPLALKSKVYNGSVPSLVSTTYSWTKTANIIFLDQPIGAGFSYSRIPLIDTPSDTGEVKNIHEFLQKWLSKHPQFSSNPFYASGDSYSGMIVPA 184          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP5_ARATH (Serine carboxypeptidase-like 5 OS=Arabidopsis thaliana GN=SCPL5 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.852e-27
Identity = 53/143 (37.06%), Postives = 94/143 (65.73%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNM------SLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            GY  +    + ++FY+F +S RN K+DP+++WL+GGPGCSS   + +ENGP ++  ++      SLV   + W K S+++++DQP GTGFSY+  ++  + ++ G +  +++FLQ +  +H + + N FY+ G+SY+G  +PA
Sbjct:   49 GYIGIGEEEEVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSISGLLFENGPLAMKLDVYNGTLPSLVPTTYSWTKTSSMIFLDQPVGTGFSYSRTQQYNKPSDSGEAKRIHEFLQKWLSKHQEFSSNPFYVAGDSYSGMVVPA 191          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27
Identity = 62/145 (42.76%), Postives = 90/145 (62.07%), Query Frame = 1
Query:  289 HHAGYYKLPHSHDAKMFYFFFESRNSKKD-PVVIWLTGGPGCSSE-LAVFYENGPFSIADNMS-LVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRH-NEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            H+AGY  +  S+   MFY+FFE+ +  K+ P+V+WL GGPGCSS       E GPF +  N + L +N + W+K +N+L+++ P G GFSY++   D +   +   + D Y FL  +FE+ P+  EN FYI GESYAG Y+P  A
Sbjct:   64 HYAGYVPVDESNGRAMFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTNGNGLNFNPYAWNKEANMLFLESPVGVGFSYSNTSSDYQKLGDDFTARDAYTFLCNWFEKFPEHKENTFYIAGESYAGKYVPELA 208          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP7_ARATH (Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27
Identity = 55/143 (38.46%), Postives = 90/143 (62.94%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNM------SLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            GY  +    + ++FY+F +S RN ++DP+++WL+GGPGCSS   + YENGP ++   +      SLV   + W K S+++Y+DQP GTGFSY+  K   + ++ G +  +++FL  +  +H + + N FY+ G+SY G  IPA
Sbjct:   46 GYIGVGEEEEVQLFYYFIKSERNPQEDPLLLWLSGGPGCSSISGLLYENGPVNVKIEVYNGTLPSLVSTTYSWTKVSSIIYLDQPVGTGFSYSRTKLVNKPSDSGEAKRIHEFLHKWLGKHQEFSSNPFYVGGDSYCGMVIPA 188          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP1_ARATH (Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27
Identity = 53/143 (37.06%), Postives = 93/143 (65.03%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNM------SLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            GY  +    + ++FY+F +S RN K+DP+++WLTGGPGCS+   + +ENGP ++  ++      SLV   + W K S+++++DQP GTGFSY+  ++  + ++ G +  +++FLQ +  +H   + N FY+ G+SY+G  +PA
Sbjct:   50 GYIGVGEEEEVQLFYYFIKSERNPKEDPLILWLTGGPGCSAISGLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSIIFLDQPVGTGFSYSRTQQFNKPSDSGEAKRIHEFLQKWLGKHQVFSSNPFYVAGDSYSGLVVPA 192          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27
Identity = 59/145 (40.69%), Postives = 87/145 (60.00%), Query Frame = 1
Query:  289 HHAGYYKLPHSHDAKMFYFFFESRNSKKD-PVVIWLTGGPGCSS-ELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHN-EXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            H+AGY  +     A +FY+FFE+ +     P+++WL GGPGCSS    V  E GPF + AD   +  N + W++ +N+L++D P G G+SY++   DI  N +   + D   FL  + E  P+  E +FY+TGESYAGHY+P  A
Sbjct:   15 HYAGYVTVSEDRGAALFYWFFEAAHDPASKPLLLWLNGGPGCSSIAFGVGEEVGPFHVNADGKGVHMNPYSWNQVANILFLDSPVGVGYSYSNTSADILSNGDERTAKDSLVFLTKWLERFPQYKEREFYLTGESYAGHYVPQLA 159          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: KEX1_SCHPO (Carboxypeptidase kex1 OS=Schizosaccharomyces pombe GN=kex1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26
Identity = 60/141 (42.55%), Postives = 84/141 (59.57%), Query Frame = 1
Query:  292 HAGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            HAG+       D  +F++ FES +   +   ++WL GGPGCSSE     E GPF + DN +   N   WD+  NLL+VDQP GTG+SY+  K D + N   ++ND   F + F EE P+ A ++++I GES+AG YIP  A
Sbjct:   46 HAGHLNQTDQLDGDLFFWMFESVKPEYEHRSILWLNGGPGCSSEDGSLMEVGPFRLDDNNTFQLNPGRWDELGNLLFVDQPLGTGYSYSLAK-DFQSNNEKMANDFSIFFEKFLEEFPERANDEWFIAGESFAGQYIPHIA 185          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP6_ARATH (Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.912e-26
Identity = 54/143 (37.76%), Postives = 93/143 (65.03%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNM------SLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            GY  +    + ++FY+F +S RN K+DP+++WLTGGPGCS+   + YENGP ++  ++      SLV   + W K S+++++DQP GTGFSY+  +   + ++ G +  +++FLQ +  +H + + N FY+ G+SY+G  +PA
Sbjct:   50 GYIGVGEEEEVQLFYYFIKSERNPKEDPLLLWLTGGPGCSAISGLLYENGPLTMKLDVYNGTLPSLVSTTYSWTKNSSMIFLDQPVGTGFSYSRTELFNKPSDTGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGITVPA 192          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP4_ARATH (Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.912e-26
Identity = 53/143 (37.06%), Postives = 93/143 (65.03%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNM------SLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            GY  +    + ++FY+F +S RN K+DP+++WLTGGPGCS+   + Y+NGP ++  ++      SLV   + W K S+++++DQP GTGFSY+  +   + ++ G +  +++FLQ +  +H + + N FY+ G+SY+G  +PA
Sbjct:   50 GYIGVGEEEEVQLFYYFIKSERNPKEDPLLLWLTGGPGCSAISGLLYQNGPLAMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQLFNKPSDTGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGLVVPA 192          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP3_ARATH (Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.259e-26
Identity = 53/143 (37.06%), Postives = 93/143 (65.03%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNM------SLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            GY  +    + ++FY+F +S RN K+DP+++WL+GGPGCSS   + +ENGP ++  ++      SLV   + W KAS+++++DQP G GFSY+  +   + ++ G +  +++FLQ +  +H + + N FY+ G+SY+G  +PA
Sbjct:   50 GYIGVGEEEEVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSISGLLFENGPLAMKLDVYNGTLPSLVSTTYSWTKASSMIFLDQPVGAGFSYSRTQLLNKPSDSGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGMVVPA 192          
The following BLAST results are available for this feature:
BLAST of FC920505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
SCP12_ARATH2.949e-2737.76Serine carboxypeptidase-like 12 OS=Arabidopsis tha... [more]
SCP5_ARATH3.852e-2737.06Serine carboxypeptidase-like 5 OS=Arabidopsis thal... [more]
SCP31_ARATH6.571e-2742.76Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
SCP7_ARATH8.581e-2738.46Serine carboxypeptidase-like 7 OS=Arabidopsis thal... [more]
SCP1_ARATH8.581e-2737.06Serine carboxypeptidase-like 1 OS=Arabidopsis thal... [more]
CBP22_HORVU8.581e-2740.69Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
KEX1_SCHPO1.464e-2642.55Carboxypeptidase kex1 OS=Schizosaccharomyces pombe... [more]
SCP6_ARATH1.912e-2637.76Serine carboxypeptidase-like 6 OS=Arabidopsis thal... [more]
SCP4_ARATH1.912e-2637.06Serine carboxypeptidase-like 4 OS=Arabidopsis thal... [more]
SCP3_ARATH4.259e-2637.06Serine carboxypeptidase-like 3 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32009C08EF RVDevelop1 Citrus clementina cDNA clone C32009C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920505 ID=FC920505; Name=FC920505; organism=Citrus clementina; type=EST; length=712bp
ACAGAAGATGGAGAAAATCAAATATTTTTCGGTCTAGTTCTCTCTCTGCT
ATTCGTCTCGCCATCGGCATTTCTATTAAACGACCGTCGTTTGGGTGCCT
CAACATTTCCGTCCTTACAGGCGGAGAAGCTGATCAGGCAGCTCAACTTG
TTCCCCAAGGAGGATGTCAACCTGGTCGACGGCCGTCAATCGGCTCCGTT
GTTGGCCGGAACTGGGAAGAGGATCGTCGAGAAGCGGATTAACTTGTTGA
GGGAGTCCGGTGGTGGAGTCTCCGTCGAGGATTTGGGGCATCATGCTGGA
TATTACAAGCTTCCCCACTCTCACGACGCTAAGATGTTTTACTTCTTCTT
CGAATCACGCAACAGCAAGAAGGATCCTGTTGTAATCTGGTTGACTGGAG
GGCCCGGGTGCAGTAGTGAATTGGCTGTATTTTATGAAAATGGTCCGTTC
AGTATTGCAGATAATATGTCTCTTGTTTGGAACGAGCATGGTTGGGATAA
GGCATCAAACCTTCTGTATGTTGATCAACCTACTGGGACTGGGTTTAGTT
ACACTTCTGATAAACGTGACATTCGTCACAATGAANATGGAGTTAGCAAT
GACCTCTATGACTTCTTACAGGCCTTCTTTGAGGAGCATCCTAAGCTTGC
AGAGAATGACTTCTATATAACTGGGGAATCATATGCTGGGCACTATATTC
CTGCATTTGCTG
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