FC920505

Overview
NameFC920505
Unique NameFC920505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.259e-26
Identity = 62/143 (43.36%), Postives = 93/143 (65.03%), Query Frame = 1
Query:  292 HAGYYKLPHSHDAKMF-YFFFESRNSKKD-PVVIWLTGGPGCSSELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            ++GY +   + D+K F Y+F ES+N  K+ PVV+WL GGPGCSS   +  E+GPF I  D ++L +N + W+  +N+LY++ P G GFSY+ DK  +  N+  V+ + Y+ L+ FF   P+  +N  ++TGESYAG YIP  A
Sbjct:   45 YSGYLR---ASDSKHFHYWFVESQNDPKNSPVVLWLNGGPGCSSLDGLLTEHGPFLIQPDGVTLEYNPYAWNLIANVLYIESPAGVGFSYSDDKMYVT-NDTEVAENNYEALKDFFRLFPEYKDNKLFLTGESYAGIYIPTLA 183          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP40_ARATH (Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.265e-26
Identity = 62/164 (37.80%), Postives = 91/164 (55.49%), Query Frame = 1
Query:  232 KRINLLRESGGGVSVEDLGHHAGYYKLPHSHDAKMFYFFFESRNSK-KDPVVIWLTGGPGCSS-ELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDI-RHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            ++ +L+R   G   V     + GY  +  S     FY+F E+  SK   P+++WL GGPGCSS       E GPF + +D  +L  N + W+ A+N+L+++ P G GFSYT+   D+ +H +   + D Y FL  + E  P+    D YI GESYAGHY+P  A
Sbjct:   77 RKRDLIRRLPGQPPVS-FDQYGGYVTVNESAGRSFFYYFVEASKSKDSSPLLLWLNGGPGCSSLAYGALQELGPFRVHSDGKTLFRNRYAWNNAANVLFLESPAGVGFSYTNTTSDLEKHGDRNTAADNYIFLVNWLERFPEYKGRDLYIAGESYAGHYVPQLA 239          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP11_ARATH (Serine carboxypeptidase-like 11 OS=Arabidopsis thaliana GN=SCPL11 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.265e-26
Identity = 52/143 (36.36%), Postives = 87/143 (60.84%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNM------SLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            GY  +    + ++FY+F +S RN K+DP+++WL+GGPGCSS   + ++NGP ++   +      SLV   + W K +N++++DQP G GFSY+         + G    +++FLQ +  +HP+ + N FY  G+SY+G  +PA
Sbjct:   42 GYIGIGEEEEVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSITGLLFQNGPLALKSEVYNGSVPSLVSTTYSWTKTANIIFLDQPVGAGFSYSRAPLIDTPTDTGEVKRIHEFLQKWLSKHPQFSSNHFYAGGDSYSGMIVPA 184          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP10_ARATH (Serine carboxypeptidase-like 10 OS=Arabidopsis thaliana GN=SCPL10 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.265e-26
Identity = 54/143 (37.76%), Postives = 88/143 (61.54%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFESRNS-KKDPVVIWLTGGPGCSSELAVFYENGPFSI------ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            GY  +    D ++FY+F +S N+ K+DP+++WL GGPGCSS   + +ENGP ++        N SL    + W K +N++Y+DQP G+GFSY+      + ++      +++FLQ +  +HP+   N FY+TG+SY+G  +PA
Sbjct:   42 GYIGIGEEEDIQLFYYFIKSENNPKEDPLLLWLDGGPGCSSLGGLLFENGPVALKSAVYNGSNPSLFSTTYSWTKMANIIYLDQPVGSGFSYSRTPIG-KSSDTSEVKRIHEFLQKWLSKHPQFFSNPFYVTGDSYSGMIVPA 183          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.488e-26
Identity = 60/145 (41.38%), Postives = 88/145 (60.69%), Query Frame = 1
Query:  289 HHAGYYKLPHSHDAKMFYFFFESRNSKKD-PVVIWLTGGPGCSSE-LAVFYENGPFSIADN-MSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRD-IRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            H+AGY  +  S+   +FY+FFE+ +  K+ P+V+WL GGPGCSS       E GPF    N   L++N + W+K  N+L+++ P G GFSY++   D +  ++     D Y FL  +FE+ P+   N+FYI GESYAG Y+P  A
Sbjct:   58 HYAGYVPVDKSNGRALFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLADTNEKGLIFNPYAWNKEVNMLFLESPVGVGFSYSNTSSDYLNLDDHFAKKDAYTFLCNWFEKFPEHKGNEFYIAGESYAGIYVPELA 202          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: YUA6_CAEEL (Uncharacterized serine carboxypeptidase F13S12.6 OS=Caenorhabditis elegans GN=F13D12.6 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.239e-25
Identity = 56/148 (37.84%), Postives = 91/148 (61.49%), Query Frame = 1
Query:  265 GVSVEDLGHHAGYYKLPHSHDAKMFYFFFESR-NSKKDPVVIWLTGGPGCSSELAVFYENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIP 702
            G  + +   ++GYY +    +  + Y+F ES+ N   DPV++WLTGGPGCS   A+  E GP+++  D  +L  N + W+K +++L ++ P G G+SY +D  +I   +   +++ ++ L AFF E P+   NDFY+TGESY G Y+P
Sbjct:   29 GAPISNFKQYSGYYNVGTKKNHMLHYWFVESQSNPSTDPVLLWLTGGPGCSGLSALLTEWGPWNVNTDGATLRTNPYSWNKNASILTLEAPAGVGYSYATD-NNIATGDDQTASENWEALVAFFNEFPQYKGNDFYVTGESYGGIYVP 175          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP9_ARATH (Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.239e-25
Identity = 52/143 (36.36%), Postives = 89/143 (62.24%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNM------SLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            GY  +    + + FY+F +S +N ++DP++IWL GGPGCS    +F+ENGP ++ + +      SLV   + W K +N++++DQP G+GFSY+    + R ++      +++FLQ +  +HP+   N FY+ G+SY+G  +PA
Sbjct:   42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIE-RTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPA 183          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.618e-25
Identity = 59/143 (41.26%), Postives = 82/143 (57.34%), Query Frame = 1
Query:  292 HAGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSS-ELAVFYENGPF-SIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 711
            +AGY  +       +FY++ E+ +     P+ +WL GGPGCSS     F E GPF    D   L  N   W+KAS+LL+V+ P G G+SY++   D    +   +ND+  FL  +FE+ PKL   D ++TGESYAGHYIP  A
Sbjct:   47 YAGYVDVDVKAGRSLFYYYVEAVKQPDSKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRVNSMSWNKASHLLFVESPAGVGWSYSNKSSDYNTGDKSTANDMLVFLLRWFEKFPKLKSRDLFLTGESYAGHYIPQLA 189          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.761e-25
Identity = 60/145 (41.38%), Postives = 88/145 (60.69%), Query Frame = 1
Query:  289 HHAGYYKLPHSHDAKMFYFFFES-RNSKKDPVVIWLTGGPGCSSELAVFY----ENGPFSI-ADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHN-EXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIP 702
            H++G+          +FY+ FE+  ++K  P+V+WL GGPGCSS   V Y    E GPF I AD  +L  N++ W++A+N+L++D P G G+SY++   D++ N +   + D   FL  + E  P+    DFYI GESYAGHYIP
Sbjct:   52 HYSGFVATNEQLGRALFYWLFEAVEDAKSKPLVLWLNGGPGCSS---VAYGEAEEIGPFHIKADGKTLYLNQYSWNQAANILFLDAPVGVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKWVERFPEYKGRDFYIVGESYAGHYIP 193          
BLAST of FC920505 vs. ExPASy Swiss-Prot
Match: SCP15_ARATH (Serine carboxypeptidase-like 15 OS=Arabidopsis thaliana GN=SCPL15 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.761e-25
Identity = 54/143 (37.76%), Postives = 87/143 (60.84%), Query Frame = 1
Query:  298 GYYKLPHSHDAKMFYFFFESRNS-KKDPVVIWLTGGPGCSSELAVFYENGPFSIADNM------SLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNEXGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPA 705
            GY  +    + ++FY+F +S N+ ++DP+++WLTGGPGCSS   + YENGP +           +LV   + W K +N++Y+DQP GTGFSY+ +      ++ G    + +F++ +  +HP+   N FY+TG SY+G  IPA
Sbjct:   45 GYIGVGQKEEDQLFYYFIKSENNPEEDPLLVWLTGGPGCSSFSGLVYENGPLAFKVETYNGSVPTLVSTTYSWTKVANIIYLDQPVGTGFSYSRNPFADIPSDTGSVKRVNEFVRKWLAKHPEYFSNPFYVTGNSYSGKVIPA 187          
The following BLAST results are available for this feature:
BLAST of FC920505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
PPGB_MOUSE4.259e-2643.36Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
SCP40_ARATH7.265e-2637.80Serine carboxypeptidase-like 40 OS=Arabidopsis tha... [more]
SCP11_ARATH7.265e-2636.36Serine carboxypeptidase-like 11 OS=Arabidopsis tha... [more]
SCP10_ARATH7.265e-2637.76Serine carboxypeptidase-like 10 OS=Arabidopsis tha... [more]
SCP30_ARATH9.488e-2641.38Putative serine carboxypeptidase-like 30 OS=Arabid... [more]
YUA6_CAEEL1.239e-2537.84Uncharacterized serine carboxypeptidase F13S12.6 O... [more]
SCP9_ARATH1.239e-2536.36Serine carboxypeptidase-like 9 OS=Arabidopsis thal... [more]
SCP42_ARATH1.618e-2541.26Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]
SCP29_ARATH2.761e-2541.38Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
SCP15_ARATH2.761e-2537.76Serine carboxypeptidase-like 15 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC32009C08EF RVDevelop1 Citrus clementina cDNA clone C32009C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920505 ID=FC920505; Name=FC920505; organism=Citrus clementina; type=EST; length=712bp
ACAGAAGATGGAGAAAATCAAATATTTTTCGGTCTAGTTCTCTCTCTGCT
ATTCGTCTCGCCATCGGCATTTCTATTAAACGACCGTCGTTTGGGTGCCT
CAACATTTCCGTCCTTACAGGCGGAGAAGCTGATCAGGCAGCTCAACTTG
TTCCCCAAGGAGGATGTCAACCTGGTCGACGGCCGTCAATCGGCTCCGTT
GTTGGCCGGAACTGGGAAGAGGATCGTCGAGAAGCGGATTAACTTGTTGA
GGGAGTCCGGTGGTGGAGTCTCCGTCGAGGATTTGGGGCATCATGCTGGA
TATTACAAGCTTCCCCACTCTCACGACGCTAAGATGTTTTACTTCTTCTT
CGAATCACGCAACAGCAAGAAGGATCCTGTTGTAATCTGGTTGACTGGAG
GGCCCGGGTGCAGTAGTGAATTGGCTGTATTTTATGAAAATGGTCCGTTC
AGTATTGCAGATAATATGTCTCTTGTTTGGAACGAGCATGGTTGGGATAA
GGCATCAAACCTTCTGTATGTTGATCAACCTACTGGGACTGGGTTTAGTT
ACACTTCTGATAAACGTGACATTCGTCACAATGAANATGGAGTTAGCAAT
GACCTCTATGACTTCTTACAGGCCTTCTTTGAGGAGCATCCTAAGCTTGC
AGAGAATGACTTCTATATAACTGGGGAATCATATGCTGGGCACTATATTC
CTGCATTTGCTG
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